RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 OVOL1O14753 267 aa8.48□□□□□ -1.05
PCDHGA9-202ENST00000616887 GNRH2O43555 120 aa8.48□□□□□ -1.05
PCDHGA9-202ENST00000616887 KHDC1LQ5JSQ8 128 aa8.48□□□□□ -1.05
PCDHGA9-202ENST00000616887 TMEM126AQ9H061 195 aa8.48□□□□□ -1.05
PCDHGA9-202ENST00000616887 SPANXA1Q9NS26 97 aa8.48□□□□□ -1.05
PCDHGA9-202ENST00000616887 M0R381 172 aa8.48□□□□□ -1.05
PCDHGA9-202ENST00000616887 C11orf44Q8N8P7 122 aa8.48□□□□□ -1.05
PCDHGA9-202ENST00000616887 NRACQ8N912 160 aa8.48□□□□□ -1.05
PCDHGA9-202ENST00000616887 FAM19A4Q96LR4 140 aa8.48□□□□□ -1.05
PCDHGA9-202ENST00000616887 LINC00477Q96M19 166 aa8.48□□□□□ -1.05
PCDHGA9-202ENST00000616887 PRO1854Q9UHT4 67 aa8.48□□□□□ -1.05
PCDHGA9-202ENST00000616887 K7EMT4 169 aa8.47□□□□□ -1.05
PCDHGA9-202ENST00000616887 SPANXN1Q5VSR9 72 aa8.47□□□□□ -1.05
PCDHGA9-202ENST00000616887 TMEM86BQ8N661 226 aa8.47□□□□□ -1.05
PCDHGA9-202ENST00000616887 LINC01587Q99440 93 aa8.47□□□□□ -1.05
PCDHGA9-202ENST00000616887 TRAV12-2A0A075B6T6 113 aa8.47□□□□□ -1.05
PCDHGA9-202ENST00000616887 TRAV2A0A0B4J234 112 aa8.47□□□□□ -1.05
PCDHGA9-202ENST00000616887 A0A0J9YY99 117 aa8.47□□□□□ -1.05
PCDHGA9-202ENST00000616887 LINC00694P0DN24 101 aa8.47□□□□□ -1.05
PCDHGA9-202ENST00000616887 NEXN-AS1Q8NBZ9 246 aa8.47□□□□□ -1.05
PCDHGA9-202ENST00000616887 LOC107984640A0A0U1RRK4 108 aa8.46□□□□□ -1.05
PCDHGA9-202ENST00000616887 TRAV21A0A0B4J279 112 aa8.46□□□□□ -1.06
PCDHGA9-202ENST00000616887 ELANEP08246 267 aa8.46□□□□□ -1.06
PCDHGA9-202ENST00000616887 UBE2E2Q96LR5 201 aa8.46□□□□□ -1.06
PCDHGA9-202ENST00000616887 ESM1Q9NQ30 184 aa8.46□□□□□ -1.06
PCDHGA9-202ENST00000616887 HIVEP1P15822 2718 aa8.45□□□□□ -1.06
PCDHGA9-202ENST00000616887 TMEM89A2RUT3 159 aa8.45□□□□□ -1.06
PCDHGA9-202ENST00000616887 IGHV3-30P01768 117 aa8.45□□□□□ -1.06
PCDHGA9-202ENST00000616887 IGHV3-30-5P0DP03 117 aa8.45□□□□□ -1.06
PCDHGA9-202ENST00000616887 TRAV12-3A0A0B4J271 114 aa8.45□□□□□ -1.06
PCDHGA9-202ENST00000616887 S100A4P26447 101 aaKnown RBP8.45□□□□□ -1.06
PCDHGA9-202ENST00000616887 EMP1P54849 157 aa8.45□□□□□ -1.06
PCDHGA9-202ENST00000616887 LENEPQ9Y5L5 61 aa8.45□□□□□ -1.06
PCDHGA9-202ENST00000616887 RNASE3P12724 160 aaKnown RBP8.44□□□□□ -1.06
PCDHGA9-202ENST00000616887 ZNF56Q15929 161 aa8.44□□□□□ -1.06
PCDHGA9-202ENST00000616887 BAALCQ8WXS3 180 aa8.44□□□□□ -1.06
PCDHGA9-202ENST00000616887 DNAJC9-AS1A6NH13 148 aa8.44□□□□□ -1.06
PCDHGA9-202ENST00000616887 KRTAP1-1Q07627 177 aa8.44□□□□□ -1.06
PCDHGA9-202ENST00000616887 C14orf178Q8N769 122 aaPredicted RBP8.44□□□□□ -1.06
PCDHGA9-202ENST00000616887 KLLNB2CW77 178 aa8.43□□□□□ -1.06
PCDHGA9-202ENST00000616887 K7EQG2 157 aa8.43□□□□□ -1.06
PCDHGA9-202ENST00000616887 Q6ZSV7 163 aa8.43□□□□□ -1.06
PCDHGA9-202ENST00000616887 DEFB104AQ8WTQ1 72 aa8.43□□□□□ -1.06
PCDHGA9-202ENST00000616887 SMR3AQ99954 134 aa8.43□□□□□ -1.06
PCDHGA9-202ENST00000616887 MUC4Q99102 2169 aa8.43□□□□□ -1.06
PCDHGA9-202ENST00000616887 F8P00451 2351 aa8.43□□□□□ -1.06
PCDHGA9-202ENST00000616887 DUSP14O95147 198 aaKnown RBP8.43□□□□□ -1.06
PCDHGA9-202ENST00000616887 SPINK13Q1W4C9 94 aa8.43□□□□□ -1.06
PCDHGA9-202ENST00000616887 LINC01620Q4KN68 170 aa8.43□□□□□ -1.06
PCDHGA9-202ENST00000616887 APRG1Q8IVJ8 170 aa8.43□□□□□ -1.06
PCDHGA9-202ENST00000616887 TOMM6Q96B49 74 aa8.43□□□□□ -1.06
PCDHGA9-202ENST00000616887 JPT2Q9H910 190 aa8.43□□□□□ -1.06
PCDHGA9-202ENST00000616887 A0A1W2PRX2 142 aa8.42□□□□□ -1.06
PCDHGA9-202ENST00000616887 Q8N2B8 174 aa8.42□□□□□ -1.06
PCDHGA9-202ENST00000616887 RNF152Q8N8N0 203 aa8.42□□□□□ -1.06
PCDHGA9-202ENST00000616887 DNAJC30Q96LL9 226 aa8.42□□□□□ -1.06
PCDHGA9-202ENST00000616887 SMIM2Q9BVW6 85 aa8.42□□□□□ -1.06
PCDHGA9-202ENST00000616887 PHLDA3Q9Y5J5 127 aa8.42□□□□□ -1.06
PCDHGA9-202ENST00000616887 SMIM9A6NGZ8 99 aa8.42□□□□□ -1.06
PCDHGA9-202ENST00000616887 H3BMM0 161 aa8.42□□□□□ -1.06
PCDHGA9-202ENST00000616887 LGALS9O00182 355 aa8.42□□□□□ -1.06
PCDHGA9-202ENST00000616887 MRPL23Q16540 153 aaKnown RBP8.42□□□□□ -1.06
PCDHGA9-202ENST00000616887 Q1RN00 199 aa8.42□□□□□ -1.06
PCDHGA9-202ENST00000616887 UBE2WQ96B02 151 aa8.42□□□□□ -1.06
PCDHGA9-202ENST00000616887 A0A0J9YX75 114 aa8.41□□□□□ -1.06
PCDHGA9-202ENST00000616887 EIF4EBP3O60516 100 aaPredicted RBP8.41□□□□□ -1.06
PCDHGA9-202ENST00000616887 IGHV3-33P01772 117 aa8.41□□□□□ -1.06
PCDHGA9-202ENST00000616887 SLC25A29Q8N8R3 303 aa8.41□□□□□ -1.06
PCDHGA9-202ENST00000616887 RPL39LQ96EH5 51 aaKnown RBP8.41□□□□□ -1.06
PCDHGA9-202ENST00000616887 IGHV4-4A0A075B6R2 117 aa8.41□□□□□ -1.06
PCDHGA9-202ENST00000616887 C11orf86A6NJI1 115 aa8.41□□□□□ -1.06
PCDHGA9-202ENST00000616887 KNCNA6PVL3 124 aa8.41□□□□□ -1.06
PCDHGA9-202ENST00000616887 MGPP08493 103 aa8.41□□□□□ -1.06
PCDHGA9-202ENST00000616887 RPL13AP40429 203 aaKnown RBP8.41□□□□□ -1.06
PCDHGA9-202ENST00000616887 ATXN8Q156A1 80 aa8.41□□□□□ -1.06
PCDHGA9-202ENST00000616887 ORMDL2Q53FV1 153 aa8.41□□□□□ -1.06
PCDHGA9-202ENST00000616887 C2orf66Q6UXQ4 117 aa8.41□□□□□ -1.06
PCDHGA9-202ENST00000616887 JMJD1CQ15652 2540 aa8.4□□□□□ -1.06
PCDHGA9-202ENST00000616887 PRM2P04554 102 aa8.4□□□□□ -1.06
PCDHGA9-202ENST00000616887 TSPEAR-AS2P59090 65 aa8.4□□□□□ -1.06
PCDHGA9-202ENST00000616887 SNRPD3P62318 126 aaKnown RBP8.4□□□□□ -1.06
PCDHGA9-202ENST00000616887 TMEM61Q8N0U2 210 aa8.4□□□□□ -1.07
PCDHGA9-202ENST00000616887 FAM236AA0A1B0GUQ0 79 aa8.39□□□□□ -1.07
PCDHGA9-202ENST00000616887 FAM236BA0A1B0GV22 79 aa8.39□□□□□ -1.07
PCDHGA9-202ENST00000616887 C9orf153Q5TBE3 101 aa8.39□□□□□ -1.07
PCDHGA9-202ENST00000616887 TRGV11A0A075B6L2 103 aa8.39□□□□□ -1.07
PCDHGA9-202ENST00000616887 A0A087WWL8 130 aa8.39□□□□□ -1.07
PCDHGA9-202ENST00000616887 TRBV10-2A0A0K0K1G8 114 aa8.39□□□□□ -1.07
PCDHGA9-202ENST00000616887 LY6G6DO95868 133 aa8.39□□□□□ -1.07
PCDHGA9-202ENST00000616887 RBMY1A1P0DJD3 496 aaKnown RBP8.39□□□□□ -1.07
PCDHGA9-202ENST00000616887 RBMY1CP0DJD4 496 aa8.39□□□□□ -1.07
PCDHGA9-202ENST00000616887 HERVK_113P61574 105 aa8.39□□□□□ -1.07
PCDHGA9-202ENST00000616887 RBMY1FQ15415 496 aaKnown RBP8.39□□□□□ -1.07
PCDHGA9-202ENST00000616887 C2orf82Q6UX34 121 aa8.39□□□□□ -1.07
PCDHGA9-202ENST00000616887 TMEM263Q8WUH6 116 aaKnown RBP8.39□□□□□ -1.07
PCDHGA9-202ENST00000616887 KLK5Q9Y337 293 aaPredicted RBP8.39□□□□□ -1.07
PCDHGA9-202ENST00000616887 DEFB131AP59861 70 aa8.38□□□□□ -1.07
PCDHGA9-202ENST00000616887 SUMO2P61956 95 aaKnown RBP8.38□□□□□ -1.07
PCDHGA9-202ENST00000616887 FAM19A5Q7Z5A7 132 aaPredicted RBP8.38□□□□□ -1.07
PCDHGA9-202ENST00000616887 CRYGDP07320 174 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms