RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 KIF25-AS1Q9Y6Z4 181 aa4.95□□□□□ -1.62
LMO3-235ENST00000616247 NPFFO15130 113 aa4.95□□□□□ -1.62
LMO3-235ENST00000616247 BRI3O95415 125 aa4.95□□□□□ -1.62
LMO3-235ENST00000616247 Q9HAA7 133 aa4.95□□□□□ -1.62
LMO3-235ENST00000616247 BAALC-AS2P0C853 105 aa4.95□□□□□ -1.62
LMO3-235ENST00000616247 HERVK_113P63121 156 aa4.95□□□□□ -1.62
LMO3-235ENST00000616247 POM121L12Q8N7R1 296 aa4.95□□□□□ -1.62
LMO3-235ENST00000616247 TMEM126AQ9H061 195 aa4.95□□□□□ -1.62
LMO3-235ENST00000616247 IGHV3OR16-12A0A075B7B8 117 aa4.94□□□□□ -1.62
LMO3-235ENST00000616247 IGKV3D-7A0A0C4DH55 119 aa4.94□□□□□ -1.62
LMO3-235ENST00000616247 ATP5J2P56134 94 aa4.94□□□□□ -1.62
LMO3-235ENST00000616247 BLCAPP62952 87 aa4.94□□□□□ -1.62
LMO3-235ENST00000616247 BPESC1Q9GZL8 116 aa4.94□□□□□ -1.62
LMO3-235ENST00000616247 NCOR2Q9Y618 2525 aa4.94□□□□□ -1.62
LMO3-235ENST00000616247 IGHV1-58A0A0C4DH39 117 aa4.94□□□□□ -1.62
LMO3-235ENST00000616247 LST1O00453 97 aa4.94□□□□□ -1.62
LMO3-235ENST00000616247 NDUFA4O00483 81 aa4.94□□□□□ -1.62
LMO3-235ENST00000616247 MIAQ16674 131 aa4.94□□□□□ -1.62
LMO3-235ENST00000616247 C5orf56Q8N8D9 126 aa4.94□□□□□ -1.62
LMO3-235ENST00000616247 Q8NA96 180 aa4.94□□□□□ -1.62
LMO3-235ENST00000616247 Q9H8V8 135 aa4.94□□□□□ -1.62
LMO3-235ENST00000616247 MOB4Q9Y3A3 225 aa4.94□□□□□ -1.62
LMO3-235ENST00000616247 U3KQE9 123 aa4.94□□□□□ -1.62
LMO3-235ENST00000616247 IGHV1OR15-1A0A075B7D0 117 aa4.93□□□□□ -1.62
LMO3-235ENST00000616247 IGHV1-69P01742 117 aa4.93□□□□□ -1.62
LMO3-235ENST00000616247 SNRPD3P62318 126 aaKnown RBP4.93□□□□□ -1.62
LMO3-235ENST00000616247 DAZ2Q13117 558 aaKnown RBP4.93□□□□□ -1.62
LMO3-235ENST00000616247 EBI3Q14213 229 aa4.93□□□□□ -1.62
LMO3-235ENST00000616247 DAZ4Q86SG3 579 aaKnown RBP4.93□□□□□ -1.62
LMO3-235ENST00000616247 TMEM61Q8N0U2 210 aa4.93□□□□□ -1.62
LMO3-235ENST00000616247 DAZ1Q9NQZ3 744 aaKnown RBP4.93□□□□□ -1.62
LMO3-235ENST00000616247 DAZ3Q9NR90 486 aaKnown RBP4.93□□□□□ -1.62
LMO3-235ENST00000616247 TOMM7Q9P0U1 55 aa4.93□□□□□ -1.62
LMO3-235ENST00000616247 Q9UF83 564 aa4.93□□□□□ -1.62
LMO3-235ENST00000616247 CDKN2A-AS1Q9UH64 79 aa4.93□□□□□ -1.62
LMO3-235ENST00000616247 hADV29S1A0JD25 119 aa4.93□□□□□ -1.62
LMO3-235ENST00000616247 H3BUX3 64 aa4.93□□□□□ -1.62
LMO3-235ENST00000616247 MED14OSP0DP75 135 aa4.93□□□□□ -1.62
LMO3-235ENST00000616247 NSUN5P1Q3KNT7 163 aa4.93□□□□□ -1.62
LMO3-235ENST00000616247 PRIMA1Q86XR5 153 aa4.93□□□□□ -1.62
LMO3-235ENST00000616247 COL27A1Q8IZC6 1860 aaPredicted RBP4.93□□□□□ -1.62
LMO3-235ENST00000616247 TLN2Q9Y4G6 2542 aa4.93□□□□□ -1.62
LMO3-235ENST00000616247 FAM223BA6NKX1 122 aa4.93□□□□□ -1.62
LMO3-235ENST00000616247 CDSNQ15517 529 aa4.93□□□□□ -1.62
LMO3-235ENST00000616247 FAM223AQ8IWN6 122 aa4.93□□□□□ -1.62
LMO3-235ENST00000616247 USP9XQ93008 2570 aaPredicted RBP4.93□□□□□ -1.62
LMO3-235ENST00000616247 NDUFA7O95182 113 aa4.92□□□□□ -1.62
LMO3-235ENST00000616247 DNAL4O96015 105 aa4.92□□□□□ -1.62
LMO3-235ENST00000616247 SDIM1Q6ZPB5 146 aa4.92□□□□□ -1.62
LMO3-235ENST00000616247 PIP4P1Q86T03 277 aa4.92□□□□□ -1.62
LMO3-235ENST00000616247 C3orf22Q8N5N4 141 aa4.92□□□□□ -1.62
LMO3-235ENST00000616247 VSIG2Q96IQ7 327 aa4.92□□□□□ -1.62
LMO3-235ENST00000616247 LINC01587Q99440 93 aa4.92□□□□□ -1.62
LMO3-235ENST00000616247 SIRPDQ9H106 197 aa4.92□□□□□ -1.62
LMO3-235ENST00000616247 RNASE1P07998 156 aaKnown RBP4.92□□□□□ -1.62
LMO3-235ENST00000616247 HIST1H4AP62805 103 aaKnown RBP4.91□□□□□ -1.62
LMO3-235ENST00000616247 KHDC1LQ5JSQ8 128 aa4.91□□□□□ -1.62
LMO3-235ENST00000616247 OR13C6PQ8NH95 151 aa4.91□□□□□ -1.62
LMO3-235ENST00000616247 SPANXA1Q9NS26 97 aa4.91□□□□□ -1.62
LMO3-235ENST00000616247 HIVEP3Q5T1R4 2406 aa4.91□□□□□ -1.62
LMO3-235ENST00000616247 TRBV6-5A0A0K0K1A5 114 aa4.91□□□□□ -1.62
LMO3-235ENST00000616247 LINC00643Q86TS7 51 aa4.91□□□□□ -1.62
LMO3-235ENST00000616247 CELSR1Q9NYQ6 3014 aa4.91□□□□□ -1.62
LMO3-235ENST00000616247 TINCRA0A1B0GVN0 87 aa4.91□□□□□ -1.62
LMO3-235ENST00000616247 KLLNB2CW77 178 aa4.91□□□□□ -1.62
LMO3-235ENST00000616247 SOCS3O14543 225 aa4.91□□□□□ -1.62
LMO3-235ENST00000616247 UQCRQO14949 82 aa4.91□□□□□ -1.62
LMO3-235ENST00000616247 IGHV3-53P01767 116 aa4.91□□□□□ -1.62
LMO3-235ENST00000616247 PIK3CD-AS1Q5SR53 167 aa4.91□□□□□ -1.62
LMO3-235ENST00000616247 SPTBN4Q9H254 2564 aa4.91□□□□□ -1.62
LMO3-235ENST00000616247 A0A1B0GX51 115 aa4.9□□□□□ -1.62
LMO3-235ENST00000616247 Q8N2B8 174 aa4.9□□□□□ -1.62
LMO3-235ENST00000616247 SMCR5Q8TEV8 140 aa4.9□□□□□ -1.62
LMO3-235ENST00000616247 LITAFQ99732 161 aa4.9□□□□□ -1.62
LMO3-235ENST00000616247 LINC00467Q9BRT7 94 aa4.9□□□□□ -1.62
LMO3-235ENST00000616247 CHD8Q9HCK8 2581 aa4.9□□□□□ -1.63
LMO3-235ENST00000616247 JMJD1CQ15652 2540 aa4.9□□□□□ -1.63
LMO3-235ENST00000616247 CUBNO60494 3623 aa4.9□□□□□ -1.63
LMO3-235ENST00000616247 TIRAPP58753 221 aa4.9□□□□□ -1.63
LMO3-235ENST00000616247 FAM19A5Q7Z5A7 132 aaPredicted RBP4.9□□□□□ -1.63
LMO3-235ENST00000616247 ATP5G1P05496 136 aa4.89□□□□□ -1.63
LMO3-235ENST00000616247 NBL1P41271 181 aa4.89□□□□□ -1.63
LMO3-235ENST00000616247 C10orf99Q6UWK7 81 aa4.89□□□□□ -1.63
LMO3-235ENST00000616247 LINC00308Q8TCZ7 52 aa4.89□□□□□ -1.63
LMO3-235ENST00000616247 C14orf132Q9NPU4 83 aa4.89□□□□□ -1.63
LMO3-235ENST00000616247 CSDC2Q9Y534 153 aaKnown RBP4.89□□□□□ -1.63
LMO3-235ENST00000616247 A0A087WVE0 104 aa4.89□□□□□ -1.63
LMO3-235ENST00000616247 J3KT08 172 aa4.89□□□□□ -1.63
LMO3-235ENST00000616247 COX7A2LO14548 114 aa4.89□□□□□ -1.63
LMO3-235ENST00000616247 TRACP01848 142 aa4.89□□□□□ -1.63
LMO3-235ENST00000616247 ACYP1P07311 99 aa4.89□□□□□ -1.63
LMO3-235ENST00000616247 MRPS36P82909 103 aaKnown RBP4.89□□□□□ -1.63
LMO3-235ENST00000616247 USMG5Q96IX5 58 aa4.89□□□□□ -1.63
LMO3-235ENST00000616247 A0A0J9YX75 114 aa4.89□□□□□ -1.63
LMO3-235ENST00000616247 TRBV7-7A0A0K0K1E9 115 aa4.89□□□□□ -1.63
LMO3-235ENST00000616247 FAM240AA0A1B0GVK7 77 aa4.89□□□□□ -1.63
LMO3-235ENST00000616247 DEFB131AP59861 70 aa4.89□□□□□ -1.63
LMO3-235ENST00000616247 DNAJC30Q96LL9 226 aa4.89□□□□□ -1.63
LMO3-235ENST00000616247 SPANXDQ9BXN6 97 aa4.89□□□□□ -1.63
LMO3-235ENST00000616247 C11orf68Q9H3H3 251 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms