RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 GAGE12HA6NDE8 117 aa7.03□□□□□ -1.28
CLTCL1-208ENST00000615606 NDUFA1O15239 70 aa7.03□□□□□ -1.28
CLTCL1-208ENST00000615606 RPL18AQ02543 176 aaKnown RBP7.03□□□□□ -1.28
CLTCL1-208ENST00000615606 SCRT2Q9NQ03 307 aa7.02□□□□□ -1.28
CLTCL1-208ENST00000615606 TRAV10A0A0B4J240 114 aa7.02□□□□□ -1.29
CLTCL1-208ENST00000615606 H3BMG7 143 aa7.02□□□□□ -1.29
CLTCL1-208ENST00000615606 CXCL5P42830 114 aa7.02□□□□□ -1.29
CLTCL1-208ENST00000615606 COX7B2Q8TF08 81 aa7.02□□□□□ -1.29
CLTCL1-208ENST00000615606 DCANP1Q8TF63 244 aa7.02□□□□□ -1.29
CLTCL1-208ENST00000615606 A0A1B0GXF2 115 aa7.02□□□□□ -1.29
CLTCL1-208ENST00000615606 TMEM126AQ9H061 195 aa7.02□□□□□ -1.29
CLTCL1-208ENST00000615606 JMJD1CQ15652 2540 aa7.01□□□□□ -1.29
CLTCL1-208ENST00000615606 HCFC1P51610 2035 aa7.01□□□□□ -1.29
CLTCL1-208ENST00000615606 IGHV4-28A0A0C4DH34 117 aa7.01□□□□□ -1.29
CLTCL1-208ENST00000615606 OXLD1Q5BKU9 147 aa7.01□□□□□ -1.29
CLTCL1-208ENST00000615606 USP9XQ93008 2570 aaPredicted RBP7.01□□□□□ -1.29
CLTCL1-208ENST00000615606 C12orf74Q32Q52 190 aa7.01□□□□□ -1.29
CLTCL1-208ENST00000615606 PCP2Q8IVA1 136 aa7.01□□□□□ -1.29
CLTCL1-208ENST00000615606 NACAE9PAV3 2078 aa7.01□□□□□ -1.29
CLTCL1-208ENST00000615606 TRBV6-4A0A1B0GX49 114 aa7.01□□□□□ -1.29
CLTCL1-208ENST00000615606 NUPR1O60356 82 aa7.01□□□□□ -1.29
CLTCL1-208ENST00000615606 C14orf177Q52M58 125 aa7.01□□□□□ -1.29
CLTCL1-208ENST00000615606 RNF183Q96D59 192 aa7.01□□□□□ -1.29
CLTCL1-208ENST00000615606 ZFYVE26Q68DK2 2539 aa7.01□□□□□ -1.29
CLTCL1-208ENST00000615606 RS1O15537 224 aa7□□□□□ -1.29
CLTCL1-208ENST00000615606 BAALCQ8WXS3 180 aa7□□□□□ -1.29
CLTCL1-208ENST00000615606 ABCA12Q86UK0 2595 aa7□□□□□ -1.29
CLTCL1-208ENST00000615606 IFITM1P13164 125 aa7□□□□□ -1.29
CLTCL1-208ENST00000615606 SPAG11BQ08648 103 aa7□□□□□ -1.29
CLTCL1-208ENST00000615606 WFDC10AQ9H1F0 79 aa7□□□□□ -1.29
CLTCL1-208ENST00000615606 PKD1L2Q7Z442 2459 aa7□□□□□ -1.29
CLTCL1-208ENST00000615606 KLLNB2CW77 178 aa7□□□□□ -1.29
CLTCL1-208ENST00000615606 CCL25O15444 150 aa7□□□□□ -1.29
CLTCL1-208ENST00000615606 IGLV1-51P01701 117 aa7□□□□□ -1.29
CLTCL1-208ENST00000615606 TIRAPP58753 221 aa7□□□□□ -1.29
CLTCL1-208ENST00000615606 LINC01545Q5VT33 79 aa7□□□□□ -1.29
CLTCL1-208ENST00000615606 CFAP126Q5VTH2 177 aa7□□□□□ -1.29
CLTCL1-208ENST00000615606 FASNP49327 2511 aaKnown RBP6.99□□□□□ -1.29
CLTCL1-208ENST00000615606 H7C423 109 aa6.99□□□□□ -1.29
CLTCL1-208ENST00000615606 CARD19Q96LW7 228 aa6.99□□□□□ -1.29
CLTCL1-208ENST00000615606 C15orf53Q8NAA6 179 aa6.99□□□□□ -1.29
CLTCL1-208ENST00000615606 P0DMU3 169 aa6.99□□□□□ -1.29
CLTCL1-208ENST00000615606 FAM231AP0DMU4 169 aa6.99□□□□□ -1.29
CLTCL1-208ENST00000615606 FAM231CP0DMU5 169 aa6.99□□□□□ -1.29
CLTCL1-208ENST00000615606 IGHV4-30-4P0DP06 118 aa6.99□□□□□ -1.29
CLTCL1-208ENST00000615606 Q6ZVH6 145 aa6.99□□□□□ -1.29
CLTCL1-208ENST00000615606 SPANXDQ9BXN6 97 aa6.99□□□□□ -1.29
CLTCL1-208ENST00000615606 TLN2Q9Y4G6 2542 aa6.99□□□□□ -1.29
CLTCL1-208ENST00000615606 LRRK2Q5S007 2527 aa6.98□□□□□ -1.29
CLTCL1-208ENST00000615606 CRIP1P50238 77 aa6.98□□□□□ -1.29
CLTCL1-208ENST00000615606 UBL5Q9BZL1 73 aa6.98□□□□□ -1.29
CLTCL1-208ENST00000615606 IGLV2-11P01706 119 aa6.98□□□□□ -1.29
CLTCL1-208ENST00000615606 LINC00173Q6ZV60 143 aa6.98□□□□□ -1.29
CLTCL1-208ENST00000615606 USP9YO00507 2555 aaPredicted RBP6.98□□□□□ -1.29
CLTCL1-208ENST00000615606 CFC1BP0CG36 223 aa6.98□□□□□ -1.29
CLTCL1-208ENST00000615606 CFC1P0CG37 223 aa6.98□□□□□ -1.29
CLTCL1-208ENST00000615606 NEXN-AS1Q8NBZ9 246 aa6.98□□□□□ -1.29
CLTCL1-208ENST00000615606 SORL1Q92673 2214 aa6.97□□□□□ -1.29
CLTCL1-208ENST00000615606 ODF3L2Q3SX64 289 aa6.97□□□□□ -1.29
CLTCL1-208ENST00000615606 FRMD6-AS1P0C7T7 363 aa6.97□□□□□ -1.29
CLTCL1-208ENST00000615606 TDRG1Q3Y452 100 aa6.97□□□□□ -1.29
CLTCL1-208ENST00000615606 ETDCA0A1B0GVM5 59 aa6.97□□□□□ -1.29
CLTCL1-208ENST00000615606 C11orf86A6NJI1 115 aa6.97□□□□□ -1.29
CLTCL1-208ENST00000615606 CRYGDP07320 174 aa6.97□□□□□ -1.29
CLTCL1-208ENST00000615606 HAMPP81172 84 aa6.97□□□□□ -1.29
CLTCL1-208ENST00000615606 REG3AQ06141 175 aa6.97□□□□□ -1.29
CLTCL1-208ENST00000615606 Q6ZUT4 128 aa6.97□□□□□ -1.29
CLTCL1-208ENST00000615606 ANKRD39Q53RE8 183 aa6.96□□□□□ -1.29
CLTCL1-208ENST00000615606 NTN5Q8WTR8 489 aaPredicted RBP6.96□□□□□ -1.3
CLTCL1-208ENST00000615606 LINC00269Q8N2A0 174 aa6.96□□□□□ -1.3
CLTCL1-208ENST00000615606 CITED1Q99966 193 aa6.96□□□□□ -1.3
CLTCL1-208ENST00000615606 SND1-IT1Q9HBX3 110 aa6.96□□□□□ -1.3
CLTCL1-208ENST00000615606 EPG5Q9HCE0 2579 aa6.96□□□□□ -1.3
CLTCL1-208ENST00000615606 M0QY20 66 aa6.96□□□□□ -1.3
CLTCL1-208ENST00000615606 PROK1P58294 105 aa6.96□□□□□ -1.3
CLTCL1-208ENST00000615606 DOPEY1Q5JWR5 2465 aa6.95□□□□□ -1.3
CLTCL1-208ENST00000615606 TRBV6-8A0A0A6YYG3 113 aa6.95□□□□□ -1.3
CLTCL1-208ENST00000615606 PRR9Q5T870 116 aa6.95□□□□□ -1.3
CLTCL1-208ENST00000615606 Q8N2B8 174 aa6.95□□□□□ -1.3
CLTCL1-208ENST00000615606 IGHV1-58A0A0C4DH39 117 aa6.95□□□□□ -1.3
CLTCL1-208ENST00000615606 E9PLD3 99 aa6.95□□□□□ -1.3
CLTCL1-208ENST00000615606 MRPS12O15235 138 aaKnown RBP6.95□□□□□ -1.3
CLTCL1-208ENST00000615606 PRB2P02812 416 aaPredicted RBP6.95□□□□□ -1.3
CLTCL1-208ENST00000615606 RNASE3P12724 160 aaKnown RBP6.95□□□□□ -1.3
CLTCL1-208ENST00000615606 PIK3CD-AS1Q5SR53 167 aa6.95□□□□□ -1.3
CLTCL1-208ENST00000615606 C9orf85Q96MD7 179 aa6.94□□□□□ -1.3
CLTCL1-208ENST00000615606 DSCR8Q96T75 97 aa6.94□□□□□ -1.3
CLTCL1-208ENST00000615606 RPL32P62910 135 aaKnown RBP6.94□□□□□ -1.3
CLTCL1-208ENST00000615606 RBMY1FQ15415 496 aaKnown RBP6.94□□□□□ -1.3
CLTCL1-208ENST00000615606 CEMP1Q6PRD7 247 aaPredicted RBP6.94□□□□□ -1.3
CLTCL1-208ENST00000615606 LINC00467Q9BRT7 94 aa6.94□□□□□ -1.3
CLTCL1-208ENST00000615606 TINCRA0A1B0GVN0 87 aa6.94□□□□□ -1.3
CLTCL1-208ENST00000615606 CRYBA4P53673 196 aa6.94□□□□□ -1.3
CLTCL1-208ENST00000615606 ODF1Q14990 250 aa6.94□□□□□ -1.3
CLTCL1-208ENST00000615606 TANC2Q9HCD6 1990 aa6.94□□□□□ -1.3
CLTCL1-208ENST00000615606 EDN2P20800 178 aa6.93□□□□□ -1.3
CLTCL1-208ENST00000615606 KPRPQ5T749 579 aaPredicted RBP6.93□□□□□ -1.3
CLTCL1-208ENST00000615606 OPRPNQ99935 248 aaPredicted RBP6.93□□□□□ -1.3
CLTCL1-208ENST00000615606 TRBV6-5A0A0K0K1A5 114 aa6.93□□□□□ -1.3
CLTCL1-208ENST00000615606 CHCHD10Q8WYQ3 142 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms