RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 SMAD5-AS1Q9Y6J3 95 aa3.47□□□□□ -1.85
CHD9-221ENST00000615216 CREBBPQ92793 2442 aa3.47□□□□□ -1.85
CHD9-221ENST00000615216 TCL1BO95988 128 aa3.47□□□□□ -1.85
CHD9-221ENST00000615216 IGLC6P0CF74 106 aa3.47□□□□□ -1.85
CHD9-221ENST00000615216 P0DMU3 169 aa3.47□□□□□ -1.85
CHD9-221ENST00000615216 FAM231AP0DMU4 169 aa3.47□□□□□ -1.85
CHD9-221ENST00000615216 FAM231CP0DMU5 169 aa3.47□□□□□ -1.85
CHD9-221ENST00000615216 DEFB135Q30KP9 77 aa3.47□□□□□ -1.85
CHD9-221ENST00000615216 IGF1P05019 195 aa3.46□□□□□ -1.85
CHD9-221ENST00000615216 E7EUB6 86 aa3.46□□□□□ -1.86
CHD9-221ENST00000615216 C14orf132Q9NPU4 83 aa3.46□□□□□ -1.86
CHD9-221ENST00000615216 UNQ9165/PRO28630Q6UXU0 137 aa3.46□□□□□ -1.86
CHD9-221ENST00000615216 TIMM17BO60830 172 aa3.46□□□□□ -1.86
CHD9-221ENST00000615216 IGLV2-8P01709 118 aa3.46□□□□□ -1.86
CHD9-221ENST00000615216 TMEM223A0PJW6 202 aa3.46□□□□□ -1.86
CHD9-221ENST00000615216 IBA57-AS1B1ANH7 110 aa3.45□□□□□ -1.86
CHD9-221ENST00000615216 Q6YL49 198 aa3.45□□□□□ -1.86
CHD9-221ENST00000615216 KLK12Q9UKR0 248 aa3.45□□□□□ -1.86
CHD9-221ENST00000615216 NDUFV3P56181 108 aaKnown RBP3.45□□□□□ -1.86
CHD9-221ENST00000615216 REG3AQ06141 175 aa3.45□□□□□ -1.86
CHD9-221ENST00000615216 GPR179Q6PRD1 2367 aa3.45□□□□□ -1.86
CHD9-221ENST00000615216 PRORYQ9H606 182 aa3.45□□□□□ -1.86
CHD9-221ENST00000615216 MLST8Q9BVC4 326 aa3.45□□□□□ -1.86
CHD9-221ENST00000615216 MUC6Q6W4X9 2439 aa3.45□□□□□ -1.86
CHD9-221ENST00000615216 BPY2O14599 106 aa3.45□□□□□ -1.86
CHD9-221ENST00000615216 PRRC2AP48634 2157 aaKnown RBP3.44□□□□□ -1.86
CHD9-221ENST00000615216 H0Y9J4 135 aa3.44□□□□□ -1.86
CHD9-221ENST00000615216 RNASE8Q8TDE3 154 aaKnown RBP3.44□□□□□ -1.86
CHD9-221ENST00000615216 FAM208BQ5VWN6 2430 aa3.44□□□□□ -1.86
CHD9-221ENST00000615216 C11orf45Q8TAV5 145 aa3.44□□□□□ -1.86
CHD9-221ENST00000615216 LINC00467Q9BRT7 94 aa3.44□□□□□ -1.86
CHD9-221ENST00000615216 NAV3Q8IVL0 2385 aa3.44□□□□□ -1.86
CHD9-221ENST00000615216 UQCRQO14949 82 aa3.44□□□□□ -1.86
CHD9-221ENST00000615216 EBI3Q14213 229 aa3.44□□□□□ -1.86
CHD9-221ENST00000615216 LY6LH3BQJ8 138 aa3.44□□□□□ -1.86
CHD9-221ENST00000615216 TRBV30A0A0K0K1B3 111 aa3.44□□□□□ -1.86
CHD9-221ENST00000615216 K7EQG2 157 aa3.44□□□□□ -1.86
CHD9-221ENST00000615216 NDUFC1O43677 76 aa3.44□□□□□ -1.86
CHD9-221ENST00000615216 FAM222AQ5U5X8 452 aa3.44□□□□□ -1.86
CHD9-221ENST00000615216 C20orf173Q96LM9 149 aa3.44□□□□□ -1.86
CHD9-221ENST00000615216 A0A1W2PNU3 283 aaPredicted RBP3.44□□□□□ -1.86
CHD9-221ENST00000615216 GDF5OSQ5U4N7 250 aa3.44□□□□□ -1.86
CHD9-221ENST00000615216 CFAP126Q5VTH2 177 aa3.44□□□□□ -1.86
CHD9-221ENST00000615216 Q8NA96 180 aa3.44□□□□□ -1.86
CHD9-221ENST00000615216 CHCHD10Q8WYQ3 142 aaPredicted RBP3.44□□□□□ -1.86
CHD9-221ENST00000615216 FAM110AQ9BQ89 295 aa3.44□□□□□ -1.86
CHD9-221ENST00000615216 PYGO1Q9Y3Y4 419 aa3.44□□□□□ -1.86
CHD9-221ENST00000615216 IGHV4-31P0DP07 118 aa3.43□□□□□ -1.86
CHD9-221ENST00000615216 ZNF80P51504 273 aaPredicted RBP3.43□□□□□ -1.86
CHD9-221ENST00000615216 MBD6Q96DN6 1003 aa3.43□□□□□ -1.86
CHD9-221ENST00000615216 CRYGDP07320 174 aa3.43□□□□□ -1.86
CHD9-221ENST00000615216 HILS1P60008 231 aa3.43□□□□□ -1.86
CHD9-221ENST00000615216 MUC7Q8TAX7 377 aa3.43□□□□□ -1.86
CHD9-221ENST00000615216 MIFP14174 115 aa3.43□□□□□ -1.86
CHD9-221ENST00000615216 COX17Q14061 63 aa3.43□□□□□ -1.86
CHD9-221ENST00000615216 LINC00269Q8N2A0 174 aa3.43□□□□□ -1.86
CHD9-221ENST00000615216 PRR15LQ9BU68 103 aa3.43□□□□□ -1.86
CHD9-221ENST00000615216 ZFAND3Q9H8U3 227 aa3.43□□□□□ -1.86
CHD9-221ENST00000615216 LMO4P61968 165 aa3.43□□□□□ -1.86
CHD9-221ENST00000615216 C3orf22Q8N5N4 141 aa3.43□□□□□ -1.86
CHD9-221ENST00000615216 V9GYY9 64 aa3.43□□□□□ -1.86
CHD9-221ENST00000615216 IGLV4-3A0A075B6K6 122 aa3.43□□□□□ -1.86
CHD9-221ENST00000615216 TRAV26-1A0A087WT03 109 aa3.43□□□□□ -1.86
CHD9-221ENST00000615216 M0QY20 66 aa3.43□□□□□ -1.86
CHD9-221ENST00000615216 DEFB114Q30KQ6 69 aa3.43□□□□□ -1.86
CHD9-221ENST00000615216 TEX49A0A1B0GTD5 131 aa3.43□□□□□ -1.86
CHD9-221ENST00000615216 TP73-AS1Q9UF72 201 aa3.43□□□□□ -1.86
CHD9-221ENST00000615216 IGKV4-1P06312 121 aa3.42□□□□□ -1.86
CHD9-221ENST00000615216 FAM236DA0A1B0GTK5 79 aa3.42□□□□□ -1.86
CHD9-221ENST00000615216 TRBV6-4A0A1B0GX49 114 aa3.42□□□□□ -1.86
CHD9-221ENST00000615216 FAM236CP0DP71 79 aa3.42□□□□□ -1.86
CHD9-221ENST00000615216 MSMPQ1L6U9 139 aa3.42□□□□□ -1.86
CHD9-221ENST00000615216 ZNF295-AS1Q8N0V1 137 aa3.42□□□□□ -1.86
CHD9-221ENST00000615216 LINC00308Q8TCZ7 52 aa3.42□□□□□ -1.86
CHD9-221ENST00000615216 YPEL4Q96NS1 127 aa3.42□□□□□ -1.86
CHD9-221ENST00000615216 IMUPQ9GZP8 106 aa3.42□□□□□ -1.86
CHD9-221ENST00000615216 DHRS4-AS1Q9P1J3 65 aa3.42□□□□□ -1.86
CHD9-221ENST00000615216 ZNF706Q9Y5V0 76 aaPredicted RBP3.42□□□□□ -1.86
CHD9-221ENST00000615216 TRBV6-5A0A0K0K1A5 114 aa3.42□□□□□ -1.86
CHD9-221ENST00000615216 ZNF22P17026 224 aaPredicted RBP3.42□□□□□ -1.86
CHD9-221ENST00000615216 MRPS36P82909 103 aaKnown RBP3.42□□□□□ -1.86
CHD9-221ENST00000615216 LINC00322Q6ZN03 302 aaPredicted RBP3.42□□□□□ -1.86
CHD9-221ENST00000615216 TP53TG3Q9ULZ0 132 aa3.42□□□□□ -1.86
CHD9-221ENST00000615216 PIK3CD-AS1Q5SR53 167 aa3.42□□□□□ -1.86
CHD9-221ENST00000615216 RNF185Q96GF1 192 aa3.42□□□□□ -1.86
CHD9-221ENST00000615216 TTTY13Q9BZ97 58 aa3.42□□□□□ -1.86
CHD9-221ENST00000615216 IGKV2D-26A0A0A0MRZ7 120 aa3.42□□□□□ -1.86
CHD9-221ENST00000615216 Q6ZTI0 123 aa3.42□□□□□ -1.86
CHD9-221ENST00000615216 TRBV6-8A0A0A6YYG3 113 aa3.42□□□□□ -1.86
CHD9-221ENST00000615216 TRAV23DV6A0A075B6W5 121 aa3.42□□□□□ -1.86
CHD9-221ENST00000615216 TRBV27A0A0K0K1C4 114 aa3.42□□□□□ -1.86
CHD9-221ENST00000615216 BRWD1-AS2P59051 145 aa3.42□□□□□ -1.86
CHD9-221ENST00000615216 PTPRQQ9UMZ3 2332 aa3.42□□□□□ -1.86
CHD9-221ENST00000615216 NDUFC2-KCTD14E9PQ53 114 aa3.42□□□□□ -1.86
CHD9-221ENST00000615216 DEFB4AO15263 64 aa3.42□□□□□ -1.86
CHD9-221ENST00000615216 PRB1P04280 392 aa3.42□□□□□ -1.86
CHD9-221ENST00000615216 FRMD6-AS1P0C7T7 363 aa3.42□□□□□ -1.86
CHD9-221ENST00000615216 COL27A1Q8IZC6 1860 aaPredicted RBP3.41□□□□□ -1.86
CHD9-221ENST00000615216 CRIP3Q6Q6R5 217 aa3.41□□□□□ -1.86
CHD9-221ENST00000615216 ESM1Q9NQ30 184 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms