RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 GPHB5Q86YW7 130 aa6.58□□□□□ -1.36
VPS11-206ENST00000614944 PTPN13Q12923 2485 aa6.58□□□□□ -1.36
VPS11-206ENST00000614944 NBPF19A0A087WUL8 3843 aa6.58□□□□□ -1.36
VPS11-206ENST00000614944 D6R8Y8 96 aa6.57□□□□□ -1.36
VPS11-206ENST00000614944 APELAP0DMC3 54 aa6.57□□□□□ -1.36
VPS11-206ENST00000614944 GP9P14770 177 aa6.57□□□□□ -1.36
VPS11-206ENST00000614944 Q6ZS46 218 aa6.57□□□□□ -1.36
VPS11-206ENST00000614944 FP248Q71RG6 208 aaPredicted RBP6.57□□□□□ -1.36
VPS11-206ENST00000614944 ESM1Q9NQ30 184 aa6.57□□□□□ -1.36
VPS11-206ENST00000614944 ANK3Q12955 4377 aaKnown RBP6.57□□□□□ -1.36
VPS11-206ENST00000614944 KNCNA6PVL3 124 aa6.57□□□□□ -1.36
VPS11-206ENST00000614944 CFC1BP0CG36 223 aa6.57□□□□□ -1.36
VPS11-206ENST00000614944 CFC1P0CG37 223 aa6.57□□□□□ -1.36
VPS11-206ENST00000614944 FAM104BQ5XKR9 115 aa6.57□□□□□ -1.36
VPS11-206ENST00000614944 LINC00305Q7Z4B0 112 aa6.57□□□□□ -1.36
VPS11-206ENST00000614944 TMEM243Q9BU79 118 aa6.57□□□□□ -1.36
VPS11-206ENST00000614944 UNC79Q9P2D8 2635 aa6.57□□□□□ -1.36
VPS11-206ENST00000614944 TRBV6-1A0A0K0K1D8 114 aa6.57□□□□□ -1.36
VPS11-206ENST00000614944 Q6ZSV7 163 aa6.57□□□□□ -1.36
VPS11-206ENST00000614944 ORMDL3Q8N138 153 aa6.57□□□□□ -1.36
VPS11-206ENST00000614944 FXYD5Q96DB9 178 aa6.57□□□□□ -1.36
VPS11-206ENST00000614944 GCN1Q92616 2671 aaKnown RBP6.56□□□□□ -1.36
VPS11-206ENST00000614944 NAV2Q8IVL1 2488 aa6.56□□□□□ -1.36
VPS11-206ENST00000614944 Q8N8P6 123 aa6.56□□□□□ -1.36
VPS11-206ENST00000614944 MRPL35Q9NZE8 188 aaKnown RBP6.56□□□□□ -1.36
VPS11-206ENST00000614944 C4orf3Q8WVX3 66 aa6.56□□□□□ -1.36
VPS11-206ENST00000614944 PLNP26678 52 aa6.55□□□□□ -1.36
VPS11-206ENST00000614944 COPS9Q8WXC6 57 aa6.55□□□□□ -1.36
VPS11-206ENST00000614944 PAXXQ9BUH6 204 aa6.55□□□□□ -1.36
VPS11-206ENST00000614944 NAV3Q8IVL0 2385 aa6.55□□□□□ -1.36
VPS11-206ENST00000614944 CLPSL1A2RUU4 121 aa6.55□□□□□ -1.36
VPS11-206ENST00000614944 FHL2Q14192 279 aa6.55□□□□□ -1.36
VPS11-206ENST00000614944 ORMDL2Q53FV1 153 aa6.55□□□□□ -1.36
VPS11-206ENST00000614944 KHDC1LQ5JSQ8 128 aa6.55□□□□□ -1.36
VPS11-206ENST00000614944 SMCR5Q8TEV8 140 aa6.55□□□□□ -1.36
VPS11-206ENST00000614944 Q9UF83 564 aa6.55□□□□□ -1.36
VPS11-206ENST00000614944 CRYBG3Q68DQ2 2970 aa6.55□□□□□ -1.36
VPS11-206ENST00000614944 ZNF815PA8K554 130 aa6.54□□□□□ -1.36
VPS11-206ENST00000614944 ARMS2P0C7Q2 107 aa6.54□□□□□ -1.36
VPS11-206ENST00000614944 LYZP61626 148 aa6.54□□□□□ -1.36
VPS11-206ENST00000614944 CLEC19AQ6UXS0 136 aa6.54□□□□□ -1.36
VPS11-206ENST00000614944 LINC00322Q6ZN03 302 aaPredicted RBP6.54□□□□□ -1.36
VPS11-206ENST00000614944 OXLD1Q5BKU9 147 aa6.54□□□□□ -1.36
VPS11-206ENST00000614944 Q6ZRU5 148 aa6.54□□□□□ -1.36
VPS11-206ENST00000614944 U3KQK5 164 aa6.54□□□□□ -1.36
VPS11-206ENST00000614944 IGHV3-21A0A0B4J1V1 117 aa6.54□□□□□ -1.36
VPS11-206ENST00000614944 A0A0B4J2C4 111 aa6.54□□□□□ -1.36
VPS11-206ENST00000614944 BUB3O43684 328 aa6.54□□□□□ -1.36
VPS11-206ENST00000614944 IGHV3-48P01763 117 aa6.54□□□□□ -1.36
VPS11-206ENST00000614944 C11orf45Q8TAV5 145 aa6.54□□□□□ -1.36
VPS11-206ENST00000614944 KLK15Q9H2R5 256 aa6.54□□□□□ -1.36
VPS11-206ENST00000614944 PLXNB1O43157 2135 aa6.53□□□□□ -1.36
VPS11-206ENST00000614944 H7C423 109 aa6.53□□□□□ -1.36
VPS11-206ENST00000614944 PAX4O43316 350 aa6.53□□□□□ -1.36
VPS11-206ENST00000614944 SS18Q15532 418 aa6.53□□□□□ -1.36
VPS11-206ENST00000614944 Q1RN00 199 aa6.53□□□□□ -1.36
VPS11-206ENST00000614944 MORN5Q5VZ52 161 aa6.53□□□□□ -1.36
VPS11-206ENST00000614944 DAZ1Q9NQZ3 744 aaKnown RBP6.53□□□□□ -1.36
VPS11-206ENST00000614944 ITPR3Q14573 2671 aa6.53□□□□□ -1.36
VPS11-206ENST00000614944 DAZ2Q13117 558 aaKnown RBP6.53□□□□□ -1.36
VPS11-206ENST00000614944 CIRBPQ14011 172 aaKnown RBP6.53□□□□□ -1.36
VPS11-206ENST00000614944 DAZ4Q86SG3 579 aaKnown RBP6.53□□□□□ -1.36
VPS11-206ENST00000614944 ZNF329Q86UD4 541 aa6.53□□□□□ -1.36
VPS11-206ENST00000614944 DAZ3Q9NR90 486 aaKnown RBP6.53□□□□□ -1.36
VPS11-206ENST00000614944 VPS13CQ709C8 3753 aa6.53□□□□□ -1.36
VPS11-206ENST00000614944 TRBV19A0A075B6N1 114 aa6.52□□□□□ -1.37
VPS11-206ENST00000614944 H3BS24 57 aa6.52□□□□□ -1.37
VPS11-206ENST00000614944 H7C2G1 150 aa6.52□□□□□ -1.37
VPS11-206ENST00000614944 IGHV3-33P01772 117 aa6.52□□□□□ -1.37
VPS11-206ENST00000614944 PRR15Q8IV56 129 aa6.52□□□□□ -1.37
VPS11-206ENST00000614944 RHOHQ15669 191 aa6.52□□□□□ -1.37
VPS11-206ENST00000614944 LAMTOR3Q9UHA4 124 aa6.52□□□□□ -1.37
VPS11-206ENST00000614944 SNRPD3P62318 126 aaKnown RBP6.52□□□□□ -1.37
VPS11-206ENST00000614944 SLC50A1Q9BRV3 221 aa6.52□□□□□ -1.37
VPS11-206ENST00000614944 SPG11Q96JI7 2443 aa6.51□□□□□ -1.37
VPS11-206ENST00000614944 MRPS36P82909 103 aaKnown RBP6.51□□□□□ -1.37
VPS11-206ENST00000614944 LINC01006Q8NI28 216 aa6.51□□□□□ -1.37
VPS11-206ENST00000614944 TACC2O95359 2948 aa6.51□□□□□ -1.37
VPS11-206ENST00000614944 CKS2P33552 79 aa6.51□□□□□ -1.37
VPS11-206ENST00000614944 PROK1P58294 105 aa6.51□□□□□ -1.37
VPS11-206ENST00000614944 SDIM1Q6ZPB5 146 aa6.51□□□□□ -1.37
VPS11-206ENST00000614944 COX8CQ7Z4L0 72 aa6.51□□□□□ -1.37
VPS11-206ENST00000614944 SMR3AQ99954 134 aa6.51□□□□□ -1.37
VPS11-206ENST00000614944 IGHV7-4-1A0A0J9YVY3 117 aa6.51□□□□□ -1.37
VPS11-206ENST00000614944 ERCC8Q13216 396 aa6.51□□□□□ -1.37
VPS11-206ENST00000614944 TIMM17BO60830 172 aa6.5□□□□□ -1.37
VPS11-206ENST00000614944 IGHV3-23P01764 117 aa6.5□□□□□ -1.37
VPS11-206ENST00000614944 CSMD2Q7Z408 3487 aa6.5□□□□□ -1.37
VPS11-206ENST00000614944 INAFM1C9JVW0 142 aa6.5□□□□□ -1.37
VPS11-206ENST00000614944 SMAD5-AS1Q9Y6J3 95 aa6.5□□□□□ -1.37
VPS11-206ENST00000614944 IGHV3-30P01768 117 aa6.49□□□□□ -1.37
VPS11-206ENST00000614944 IGHV3-30-5P0DP03 117 aa6.49□□□□□ -1.37
VPS11-206ENST00000614944 MRPL51Q4U2R6 128 aaKnown RBP6.49□□□□□ -1.37
VPS11-206ENST00000614944 TMEM75Q8N9X5 138 aa6.49□□□□□ -1.37
VPS11-206ENST00000614944 FMC1Q96HJ9 113 aa6.49□□□□□ -1.37
VPS11-206ENST00000614944 ABCA12Q86UK0 2595 aa6.49□□□□□ -1.37
VPS11-206ENST00000614944 TRBV12-3P01733 135 aa6.49□□□□□ -1.37
VPS11-206ENST00000614944 S4R3C0 116 aa6.49□□□□□ -1.37
VPS11-206ENST00000614944 ZNF469Q96JG9 3925 aaPredicted RBP6.49□□□□□ -1.37
VPS11-206ENST00000614944 Q9H3A6 140 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms