RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 TMEM70Q9BUB7 260 aa11.17□□□□□ -0.62
IRF1-211ENST00000613424 DNAH11Q96DT5 4516 aa11.17□□□□□ -0.62
IRF1-211ENST00000613424 HECTD4Q9Y4D8 3996 aa11.17□□□□□ -0.62
IRF1-211ENST00000613424 PKIAP61925 76 aa11.16□□□□□ -0.62
IRF1-211ENST00000613424 NDUFA5Q16718 116 aa11.16□□□□□ -0.62
IRF1-211ENST00000613424 MPV17L2Q567V2 206 aa11.16□□□□□ -0.62
IRF1-211ENST00000613424 ATRAIDQ6UW56 229 aa11.16□□□□□ -0.62
IRF1-211ENST00000613424 SLC7A5P1Q8MH63 180 aa11.16□□□□□ -0.62
IRF1-211ENST00000613424 TMEM243Q9BU79 118 aa11.16□□□□□ -0.62
IRF1-211ENST00000613424 KLK12Q9UKR0 248 aa11.16□□□□□ -0.62
IRF1-211ENST00000613424 TRBV24-1A0A075B6N3 115 aa11.15□□□□□ -0.62
IRF1-211ENST00000613424 TRAV9-1A0A075B6T8 112 aa11.15□□□□□ -0.62
IRF1-211ENST00000613424 A0A1B0GVY2 172 aa11.15□□□□□ -0.62
IRF1-211ENST00000613424 D6R8Y8 96 aa11.15□□□□□ -0.62
IRF1-211ENST00000613424 S100PP25815 95 aa11.15□□□□□ -0.62
IRF1-211ENST00000613424 AMTP48728 403 aa11.15□□□□□ -0.62
IRF1-211ENST00000613424 LAGE3Q14657 143 aa11.15□□□□□ -0.62
IRF1-211ENST00000613424 Q9HAA7 133 aa11.15□□□□□ -0.62
IRF1-211ENST00000613424 TRBV27A0A0K0K1C4 114 aa11.14□□□□□ -0.63
IRF1-211ENST00000613424 VCYO14598 125 aa11.14□□□□□ -0.63
IRF1-211ENST00000613424 SNAPINO95295 136 aa11.14□□□□□ -0.63
IRF1-211ENST00000613424 TNFRSF6BO95407 300 aa11.14□□□□□ -0.63
IRF1-211ENST00000613424 SUMO2P61956 95 aaKnown RBP11.14□□□□□ -0.63
IRF1-211ENST00000613424 ELOBQ15370 118 aa11.14□□□□□ -0.63
IRF1-211ENST00000613424 SVBPQ8N300 66 aa11.14□□□□□ -0.63
IRF1-211ENST00000613424 Q8N976 141 aa11.14□□□□□ -0.63
IRF1-211ENST00000613424 TRAV8-3A0A0A6YYJ7 113 aa11.13□□□□□ -0.63
IRF1-211ENST00000613424 TSHBP01222 138 aa11.13□□□□□ -0.63
IRF1-211ENST00000613424 APCSP02743 223 aa11.13□□□□□ -0.63
IRF1-211ENST00000613424 PPBPP02775 128 aa11.13□□□□□ -0.63
IRF1-211ENST00000613424 RBX1P62877 108 aa11.13□□□□□ -0.63
IRF1-211ENST00000613424 TMEM136Q6ZRR5 245 aa11.13□□□□□ -0.63
IRF1-211ENST00000613424 C20orf78Q9BR46 151 aa11.13□□□□□ -0.63
IRF1-211ENST00000613424 UBE2L6O14933 153 aa11.12□□□□□ -0.63
IRF1-211ENST00000613424 ANGP03950 147 aaKnown RBP11.12□□□□□ -0.63
IRF1-211ENST00000613424 ORMDL3Q8N138 153 aa11.12□□□□□ -0.63
IRF1-211ENST00000613424 UBE2WQ96B02 151 aa11.12□□□□□ -0.63
IRF1-211ENST00000613424 A0A1B0GUV1 79 aa11.11□□□□□ -0.63
IRF1-211ENST00000613424 NPYP01303 97 aa11.11□□□□□ -0.63
IRF1-211ENST00000613424 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.1□□□□□ -0.63
IRF1-211ENST00000613424 IGKV2-29A2NJV5 120 aaPredicted RBP11.1□□□□□ -0.63
IRF1-211ENST00000613424 PHOX2AO14813 284 aa11.1□□□□□ -0.63
IRF1-211ENST00000613424 ESDP10768 282 aa11.1□□□□□ -0.63
IRF1-211ENST00000613424 RPL32P62910 135 aaKnown RBP11.1□□□□□ -0.63
IRF1-211ENST00000613424 ENHOQ6UWT2 76 aa11.1□□□□□ -0.63
IRF1-211ENST00000613424 PRELID3AQ96N28 172 aa11.1□□□□□ -0.63
IRF1-211ENST00000613424 IGLV4-60A0A075B6I1 120 aa11.09□□□□□ -0.63
IRF1-211ENST00000613424 H7C423 109 aa11.09□□□□□ -0.63
IRF1-211ENST00000613424 Q0VG73 95 aa11.09□□□□□ -0.63
IRF1-211ENST00000613424 KIR2DL4Q99706 377 aa11.09□□□□□ -0.63
IRF1-211ENST00000613424 TM2D2Q9BX73 214 aa11.09□□□□□ -0.63
IRF1-211ENST00000613424 PSCAO43653 123 aa11.08□□□□□ -0.64
IRF1-211ENST00000613424 FCER1GP30273 86 aa11.08□□□□□ -0.64
IRF1-211ENST00000613424 LINC00269Q8N2A0 174 aa11.08□□□□□ -0.64
IRF1-211ENST00000613424 C20orf203Q8NBC4 194 aa11.08□□□□□ -0.64
IRF1-211ENST00000613424 GNB1LQ9BYB4 327 aa11.08□□□□□ -0.64
IRF1-211ENST00000613424 PKHD1P08F94 4074 aa11.08□□□□□ -0.64
IRF1-211ENST00000613424 CRPP02741 224 aa11.07□□□□□ -0.64
IRF1-211ENST00000613424 SMIM2Q9BVW6 85 aa11.07□□□□□ -0.64
IRF1-211ENST00000613424 PRR34Q9NV39 138 aa11.07□□□□□ -0.64
IRF1-211ENST00000613424 LAMTOR2Q9Y2Q5 125 aa11.07□□□□□ -0.64
IRF1-211ENST00000613424 BIRC6Q9NR09 4857 aa11.06□□□□□ -0.64
IRF1-211ENST00000613424 DYNC1H1Q14204 4646 aaKnown RBP11.06□□□□□ -0.64
IRF1-211ENST00000613424 IGKV2D-24A0A075B6R9 120 aa11.06□□□□□ -0.64
IRF1-211ENST00000613424 A0A087WTM6 91 aa11.06□□□□□ -0.64
IRF1-211ENST00000613424 PRSS47A8MTI9 375 aa11.06□□□□□ -0.64
IRF1-211ENST00000613424 HLA-DQA1P01909 254 aa11.06□□□□□ -0.64
IRF1-211ENST00000613424 FGF6P10767 208 aa11.06□□□□□ -0.64
IRF1-211ENST00000613424 KIAA1644Q3SXP7 199 aa11.06□□□□□ -0.64
IRF1-211ENST00000613424 AMMECR1LQ6DCA0 310 aa11.06□□□□□ -0.64
IRF1-211ENST00000613424 RNASEKQ6P5S7 137 aaKnown RBP11.06□□□□□ -0.64
IRF1-211ENST00000613424 CLPSL2Q6UWE3 100 aa11.06□□□□□ -0.64
IRF1-211ENST00000613424 RMI2Q96E14 147 aa11.06□□□□□ -0.64
IRF1-211ENST00000613424 TGIF2-C20orf24A0A0A6YYL0 155 aa11.05□□□□□ -0.64
IRF1-211ENST00000613424 COX19Q49B96 90 aa11.05□□□□□ -0.64
IRF1-211ENST00000613424 COX11Q9Y6N1 276 aa11.05□□□□□ -0.64
IRF1-211ENST00000613424 DNAH5Q8TE73 4624 aa11.04□□□□□ -0.64
IRF1-211ENST00000613424 LOC389332A0A1B0GUA5 103 aa11.04□□□□□ -0.64
IRF1-211ENST00000613424 LRCOL1A6NCL2 159 aa11.04□□□□□ -0.64
IRF1-211ENST00000613424 TCAPO15273 167 aa11.04□□□□□ -0.64
IRF1-211ENST00000613424 REG3AQ06141 175 aa11.04□□□□□ -0.64
IRF1-211ENST00000613424 MIAQ16674 131 aa11.04□□□□□ -0.64
IRF1-211ENST00000613424 MAPKAPK5-AS1Q8N8E1 139 aa11.04□□□□□ -0.64
IRF1-211ENST00000613424 EREGO14944 169 aa11.03□□□□□ -0.64
IRF1-211ENST00000613424 ZNF25P17030 456 aaPredicted RBP11.03□□□□□ -0.64
IRF1-211ENST00000613424 C1orf43Q9BWL3 253 aa11.03□□□□□ -0.64
IRF1-211ENST00000613424 MAP1LC3AQ9H492 121 aa11.03□□□□□ -0.64
IRF1-211ENST00000613424 KRTAP10-2P60368 255 aa11.02□□□□□ -0.65
IRF1-211ENST00000613424 SPATA12Q7Z6I5 190 aa11.02□□□□□ -0.65
IRF1-211ENST00000613424 MRPL52Q86TS9 123 aaKnown RBP11.02□□□□□ -0.65
IRF1-211ENST00000613424 TMEM101Q96IK0 257 aa11.02□□□□□ -0.65
IRF1-211ENST00000613424 MRPL18Q9H0U6 180 aaKnown RBP11.02□□□□□ -0.65
IRF1-211ENST00000613424 MT-ND6P03923 174 aa11.01□□□□□ -0.65
IRF1-211ENST00000613424 RAB5AP20339 215 aa11.01□□□□□ -0.65
IRF1-211ENST00000613424 FABP9Q0Z7S8 132 aa11.01□□□□□ -0.65
IRF1-211ENST00000613424 Q8N8P6 123 aa11.01□□□□□ -0.65
IRF1-211ENST00000613424 BAALCQ8WXS3 180 aa11.01□□□□□ -0.65
IRF1-211ENST00000613424 IGLV10-54A0A075B6I4 117 aa11□□□□□ -0.65
IRF1-211ENST00000613424 OR5A1Q8NGJ0 315 aa11□□□□□ -0.65
IRF1-211ENST00000613424 TMEM18Q96B42 140 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms