RNA–Protein interactions for RNA: ENST00000612927.1

PCDHGA4-202, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA4, Length 2,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-202ENST00000612927 AMELXQ99217 191 aa9.37□□□□□ -0.91
PCDHGA4-202ENST00000612927 MYO9AB2RTY4 2548 aa9.37□□□□□ -0.91
PCDHGA4-202ENST00000612927 IGHV4OR15-8A0A075B7B6 117 aa9.37□□□□□ -0.91
PCDHGA4-202ENST00000612927 A0A087WW49 117 aa9.37□□□□□ -0.91
PCDHGA4-202ENST00000612927 TSHBP01222 138 aa9.37□□□□□ -0.91
PCDHGA4-202ENST00000612927 IGKV3-20P01619 116 aa9.37□□□□□ -0.91
PCDHGA4-202ENST00000612927 ELANEP08246 267 aa9.37□□□□□ -0.91
PCDHGA4-202ENST00000612927 TRPT1Q86TN4 253 aaKnown RBP9.37□□□□□ -0.91
PCDHGA4-202ENST00000612927 APRG1Q8IVJ8 170 aa9.37□□□□□ -0.91
PCDHGA4-202ENST00000612927 ODF3Q96PU9 254 aa9.37□□□□□ -0.91
PCDHGA4-202ENST00000612927 TIMM17AQ99595 171 aa9.37□□□□□ -0.91
PCDHGA4-202ENST00000612927 J3QQQ9 107 aa9.36□□□□□ -0.91
PCDHGA4-202ENST00000612927 LINC01620Q4KN68 170 aa9.36□□□□□ -0.91
PCDHGA4-202ENST00000612927 POM121L12Q8N7R1 296 aa9.36□□□□□ -0.91
PCDHGA4-202ENST00000612927 SORL1Q92673 2214 aa9.36□□□□□ -0.91
PCDHGA4-202ENST00000612927 MUC4Q99102 2169 aa9.36□□□□□ -0.91
PCDHGA4-202ENST00000612927 LGALS3P17931 250 aaKnown RBP9.36□□□□□ -0.91
PCDHGA4-202ENST00000612927 SYNJ2BPP57105 145 aa9.36□□□□□ -0.91
PCDHGA4-202ENST00000612927 TP53TG1Q9Y2A0 90 aa9.36□□□□□ -0.91
PCDHGA4-202ENST00000612927 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.35□□□□□ -0.91
PCDHGA4-202ENST00000612927 TRAV12-3A0A0B4J271 114 aa9.35□□□□□ -0.91
PCDHGA4-202ENST00000612927 KLLNB2CW77 178 aa9.35□□□□□ -0.91
PCDHGA4-202ENST00000612927 TENM4Q6N022 2769 aa9.35□□□□□ -0.91
PCDHGA4-202ENST00000612927 TRBV10-2A0A0K0K1G8 114 aa9.35□□□□□ -0.91
PCDHGA4-202ENST00000612927 C18orf65Q6ZTR6 163 aa9.35□□□□□ -0.91
PCDHGA4-202ENST00000612927 MDFICQ9P1T7 246 aa9.35□□□□□ -0.91
PCDHGA4-202ENST00000612927 TRAV12-2A0A075B6T6 113 aa9.34□□□□□ -0.91
PCDHGA4-202ENST00000612927 SMIM9A6NGZ8 99 aa9.34□□□□□ -0.91
PCDHGA4-202ENST00000612927 TMEM170BQ5T4T1 132 aa9.34□□□□□ -0.91
PCDHGA4-202ENST00000612927 FAM159AQ6UWV7 190 aa9.34□□□□□ -0.91
PCDHGA4-202ENST00000612927 RNF152Q8N8N0 203 aa9.34□□□□□ -0.91
PCDHGA4-202ENST00000612927 C15orf53Q8NAA6 179 aa9.34□□□□□ -0.91
PCDHGA4-202ENST00000612927 DEFB104AQ8WTQ1 72 aa9.34□□□□□ -0.91
PCDHGA4-202ENST00000612927 UBE2E2Q96LR5 201 aa9.34□□□□□ -0.91
PCDHGA4-202ENST00000612927 JPT2Q9H910 190 aa9.34□□□□□ -0.91
PCDHGA4-202ENST00000612927 H3BMM0 161 aa9.34□□□□□ -0.91
PCDHGA4-202ENST00000612927 PLA2G2AP14555 144 aa9.34□□□□□ -0.91
PCDHGA4-202ENST00000612927 HOXD3P31249 432 aaPredicted RBP9.34□□□□□ -0.91
PCDHGA4-202ENST00000612927 ZNF876PQ49A33 203 aa9.34□□□□□ -0.91
PCDHGA4-202ENST00000612927 UBE2WQ96B02 151 aa9.34□□□□□ -0.91
PCDHGA4-202ENST00000612927 EIF4EBP3O60516 100 aaPredicted RBP9.33□□□□□ -0.92
PCDHGA4-202ENST00000612927 Q8N2B8 174 aa9.33□□□□□ -0.92
PCDHGA4-202ENST00000612927 TRBV30A0A0K0K1B3 111 aa9.33□□□□□ -0.92
PCDHGA4-202ENST00000612927 LGALS9O00182 355 aa9.33□□□□□ -0.92
PCDHGA4-202ENST00000612927 LEPROTO15243 131 aa9.33□□□□□ -0.92
PCDHGA4-202ENST00000612927 EMP1P54849 157 aa9.33□□□□□ -0.92
PCDHGA4-202ENST00000612927 DEFB136Q30KP8 78 aa9.32□□□□□ -0.92
PCDHGA4-202ENST00000612927 ZNRF2Q8NHG8 242 aa9.32□□□□□ -0.92
PCDHGA4-202ENST00000612927 SONP18583 2426 aaKnown RBP9.32□□□□□ -0.92
PCDHGA4-202ENST00000612927 TRAV2A0A0B4J234 112 aa9.32□□□□□ -0.92
PCDHGA4-202ENST00000612927 FAM240AA0A1B0GVK7 77 aa9.32□□□□□ -0.92
PCDHGA4-202ENST00000612927 A0A087WWL8 130 aa9.31□□□□□ -0.92
PCDHGA4-202ENST00000612927 A0A0J9YX75 114 aa9.31□□□□□ -0.92
PCDHGA4-202ENST00000612927 TEX49A0A1B0GTD5 131 aa9.31□□□□□ -0.92
PCDHGA4-202ENST00000612927 NXPH4O95158 308 aa9.31□□□□□ -0.92
PCDHGA4-202ENST00000612927 POLR2KP53803 58 aaKnown RBP9.31□□□□□ -0.92
PCDHGA4-202ENST00000612927 Q1RN00 199 aa9.31□□□□□ -0.92
PCDHGA4-202ENST00000612927 HIST2H2BDQ6DRA6 164 aa9.31□□□□□ -0.92
PCDHGA4-202ENST00000612927 ITPR3Q14573 2671 aa9.31□□□□□ -0.92
PCDHGA4-202ENST00000612927 AKAP9Q99996 3911 aa9.31□□□□□ -0.92
PCDHGA4-202ENST00000612927 K7EQG2 157 aa9.31□□□□□ -0.92
PCDHGA4-202ENST00000612927 SLURP1P55000 103 aa9.31□□□□□ -0.92
PCDHGA4-202ENST00000612927 TMEM126AQ9H061 195 aa9.31□□□□□ -0.92
PCDHGA4-202ENST00000612927 CHD6Q8TD26 2715 aa9.31□□□□□ -0.92
PCDHGA4-202ENST00000612927 J3QKU1 62 aa9.3□□□□□ -0.92
PCDHGA4-202ENST00000612927 VCYO14598 125 aa9.3□□□□□ -0.92
PCDHGA4-202ENST00000612927 SPINK13Q1W4C9 94 aa9.3□□□□□ -0.92
PCDHGA4-202ENST00000612927 MEIG1Q5JSS6 88 aa9.3□□□□□ -0.92
PCDHGA4-202ENST00000612927 TMEM223A0PJW6 202 aa9.3□□□□□ -0.92
PCDHGA4-202ENST00000612927 SDHAF1A6NFY7 115 aa9.3□□□□□ -0.92
PCDHGA4-202ENST00000612927 H3BT86 120 aa9.3□□□□□ -0.92
PCDHGA4-202ENST00000612927 LINC00315P59091 139 aa9.3□□□□□ -0.92
PCDHGA4-202ENST00000612927 SNRPD3P62318 126 aaKnown RBP9.3□□□□□ -0.92
PCDHGA4-202ENST00000612927 MUSTN1Q8IVN3 82 aa9.3□□□□□ -0.92
PCDHGA4-202ENST00000612927 KIF25-AS1Q9Y6Z4 181 aa9.3□□□□□ -0.92
PCDHGA4-202ENST00000612927 H7C2G1 150 aa9.29□□□□□ -0.92
PCDHGA4-202ENST00000612927 M0R2P5 195 aa9.29□□□□□ -0.92
PCDHGA4-202ENST00000612927 CUBNO60494 3623 aa9.29□□□□□ -0.92
PCDHGA4-202ENST00000612927 RPL39P62891 51 aaKnown RBP9.29□□□□□ -0.92
PCDHGA4-202ENST00000612927 CCDC168Q8NDH2 2452 aa9.29□□□□□ -0.92
PCDHGA4-202ENST00000612927 FAM74A4Q5TZK3 123 aa9.28□□□□□ -0.92
PCDHGA4-202ENST00000612927 C2orf82Q6UX34 121 aa9.28□□□□□ -0.92
PCDHGA4-202ENST00000612927 DNAJC30Q96LL9 226 aa9.28□□□□□ -0.92
PCDHGA4-202ENST00000612927 DUX3Q96PT4 197 aa9.28□□□□□ -0.92
PCDHGA4-202ENST00000612927 TRBV7-7A0A0K0K1E9 115 aa9.28□□□□□ -0.92
PCDHGA4-202ENST00000612927 TRIAP1O43715 76 aa9.28□□□□□ -0.92
PCDHGA4-202ENST00000612927 DEFB121Q5J5C9 76 aa9.28□□□□□ -0.92
PCDHGA4-202ENST00000612927 SUMO4Q6EEV6 95 aa9.28□□□□□ -0.92
PCDHGA4-202ENST00000612927 KMT2BQ9UMN6 2715 aaPredicted RBP9.28□□□□□ -0.92
PCDHGA4-202ENST00000612927 DNAJC9-AS1A6NH13 148 aa9.28□□□□□ -0.92
PCDHGA4-202ENST00000612927 F5H697 171 aa9.28□□□□□ -0.92
PCDHGA4-202ENST00000612927 KRTAP1-1Q07627 177 aa9.28□□□□□ -0.92
PCDHGA4-202ENST00000612927 Q6ZSV7 163 aa9.28□□□□□ -0.92
PCDHGA4-202ENST00000612927 TMEM86BQ8N661 226 aa9.28□□□□□ -0.92
PCDHGA4-202ENST00000612927 IGHV3-16A0A0C4DH30 117 aa9.27□□□□□ -0.93
PCDHGA4-202ENST00000612927 TRBV27A0A0K0K1C4 114 aa9.27□□□□□ -0.93
PCDHGA4-202ENST00000612927 KHDC1LQ5JSQ8 128 aa9.27□□□□□ -0.93
PCDHGA4-202ENST00000612927 NF1P21359 2839 aa9.27□□□□□ -0.93
PCDHGA4-202ENST00000612927 SPANXDQ9BXN6 97 aa9.27□□□□□ -0.93
PCDHGA4-202ENST00000612927 TRBV6-5A0A0K0K1A5 114 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms