RNA–Protein interactions for RNA: ENST00000612548.4

CIT-219, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 1 (best) BASIC

Gene CIT, Length 1,799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-219ENST00000612548 GAGE4Q13068 117 aa10.42□□□□□ -0.74
CIT-219ENST00000612548 GAGE5Q13069 117 aa10.42□□□□□ -0.74
CIT-219ENST00000612548 GAGE13Q4V321 117 aa10.42□□□□□ -0.74
CIT-219ENST00000612548 ORMDL2Q53FV1 153 aa10.42□□□□□ -0.74
CIT-219ENST00000612548 PHLDA1Q8WV24 401 aaPredicted RBP10.42□□□□□ -0.74
CIT-219ENST00000612548 RPL36ALQ969Q0 106 aaKnown RBP10.42□□□□□ -0.74
CIT-219ENST00000612548 HHLA3Q9XRX5 114 aa10.42□□□□□ -0.74
CIT-219ENST00000612548 TRBV7-3A0A075B6L6 115 aa10.41□□□□□ -0.74
CIT-219ENST00000612548 IGHV3-38A0A0C4DH36 116 aa10.41□□□□□ -0.74
CIT-219ENST00000612548 EREGO14944 169 aa10.41□□□□□ -0.74
CIT-219ENST00000612548 ATP5G1P05496 136 aa10.41□□□□□ -0.74
CIT-219ENST00000612548 FCER1GP30273 86 aa10.41□□□□□ -0.74
CIT-219ENST00000612548 LINC00173Q6ZV60 143 aa10.41□□□□□ -0.74
CIT-219ENST00000612548 Q8N976 141 aa10.41□□□□□ -0.74
CIT-219ENST00000612548 SNHG12Q9BXW3 62 aa10.41□□□□□ -0.74
CIT-219ENST00000612548 K7EMI3 77 aa10.4□□□□□ -0.74
CIT-219ENST00000612548 TSHBP01222 138 aa10.4□□□□□ -0.74
CIT-219ENST00000612548 HTN3P15516 51 aa10.4□□□□□ -0.74
CIT-219ENST00000612548 C12orf74Q32Q52 190 aa10.4□□□□□ -0.74
CIT-219ENST00000612548 PRADC1Q9BSG0 188 aa10.4□□□□□ -0.74
CIT-219ENST00000612548 CRYBA4P53673 196 aa10.39□□□□□ -0.75
CIT-219ENST00000612548 ZMAT4Q9H898 229 aa10.39□□□□□ -0.75
CIT-219ENST00000612548 PRO0255Q9UI72 69 aa10.39□□□□□ -0.75
CIT-219ENST00000612548 PAM16Q9Y3D7 125 aa10.39□□□□□ -0.75
CIT-219ENST00000612548 F5H768 121 aa10.38□□□□□ -0.75
CIT-219ENST00000612548 UBE2D3P61077 147 aa10.38□□□□□ -0.75
CIT-219ENST00000612548 UBE2D2P62837 147 aa10.38□□□□□ -0.75
CIT-219ENST00000612548 HSPB8Q9UJY1 196 aa10.38□□□□□ -0.75
CIT-219ENST00000612548 PRKDCP78527 4128 aaKnown RBP10.38□□□□□ -0.75
CIT-219ENST00000612548 C3orf79P0CE67 100 aa10.37□□□□□ -0.75
CIT-219ENST00000612548 GYPEP15421 78 aa10.37□□□□□ -0.75
CIT-219ENST00000612548 B9D2Q9BPU9 175 aa10.37□□□□□ -0.75
CIT-219ENST00000612548 A0A0J9YY99 117 aa10.37□□□□□ -0.75
CIT-219ENST00000612548 PAX4O43316 350 aa10.37□□□□□ -0.75
CIT-219ENST00000612548 COTL1Q14019 142 aa10.37□□□□□ -0.75
CIT-219ENST00000612548 C2orf66Q6UXQ4 117 aa10.37□□□□□ -0.75
CIT-219ENST00000612548 Q6ZTC4 211 aa10.37□□□□□ -0.75
CIT-219ENST00000612548 NANOS2P60321 138 aaKnown RBP10.36□□□□□ -0.75
CIT-219ENST00000612548 DAZ4Q86SG3 579 aaKnown RBP10.36□□□□□ -0.75
CIT-219ENST00000612548 C11orf45Q8TAV5 145 aa10.36□□□□□ -0.75
CIT-219ENST00000612548 TOMM6Q96B49 74 aa10.36□□□□□ -0.75
CIT-219ENST00000612548 DAZ3Q9NR90 486 aaKnown RBP10.36□□□□□ -0.75
CIT-219ENST00000612548 COL7A1Q02388 2944 aa10.35□□□□□ -0.75
CIT-219ENST00000612548 MEGF8Q7Z7M0 2845 aa10.35□□□□□ -0.75
CIT-219ENST00000612548 TRAV26-1A0A087WT03 109 aa10.35□□□□□ -0.75
CIT-219ENST00000612548 LINC00694P0DN24 101 aa10.35□□□□□ -0.75
CIT-219ENST00000612548 RPL39P62891 51 aaKnown RBP10.35□□□□□ -0.75
CIT-219ENST00000612548 VSIG2Q96IQ7 327 aa10.35□□□□□ -0.75
CIT-219ENST00000612548 CYSLTR1Q9Y271 337 aa10.35□□□□□ -0.75
CIT-219ENST00000612548 H0Y8G0 127 aa10.34□□□□□ -0.75
CIT-219ENST00000612548 IFI27L1Q96BM0 104 aa10.34□□□□□ -0.75
CIT-219ENST00000612548 MAP1LC3CQ9BXW4 147 aa10.34□□□□□ -0.75
CIT-219ENST00000612548 C20orf202A1L168 122 aa10.34□□□□□ -0.75
CIT-219ENST00000612548 SPATA45Q537H7 98 aa10.34□□□□□ -0.75
CIT-219ENST00000612548 UQCR10Q9UDW1 63 aa10.34□□□□□ -0.75
CIT-219ENST00000612548 G0S2P27469 103 aa10.33□□□□□ -0.76
CIT-219ENST00000612548 C20orf203Q8NBC4 194 aa10.33□□□□□ -0.76
CIT-219ENST00000612548 SCGB3A1Q96QR1 104 aa10.33□□□□□ -0.76
CIT-219ENST00000612548 CHCHD7Q9BUK0 85 aa10.33□□□□□ -0.76
CIT-219ENST00000612548 SYS1-DBNDD2H3BUS1 97 aa10.32□□□□□ -0.76
CIT-219ENST00000612548 SPATA12Q7Z6I5 190 aa10.32□□□□□ -0.76
CIT-219ENST00000612548 A0A096LPF7 62 aa10.31□□□□□ -0.76
CIT-219ENST00000612548 ATP5LO75964 103 aa10.31□□□□□ -0.76
CIT-219ENST00000612548 NTM-AS1Q6ZSK4 140 aa10.31□□□□□ -0.76
CIT-219ENST00000612548 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.31□□□□□ -0.76
CIT-219ENST00000612548 IGKV2-29A2NJV5 120 aaPredicted RBP10.31□□□□□ -0.76
CIT-219ENST00000612548 IGLC3P0DOY3 106 aa10.31□□□□□ -0.76
CIT-219ENST00000612548 ATP6V0E2Q8NHE4 81 aa10.31□□□□□ -0.76
CIT-219ENST00000612548 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.29□□□□□ -0.76
CIT-219ENST00000612548 PET117Q6UWS5 81 aa10.29□□□□□ -0.76
CIT-219ENST00000612548 ERASQ7Z444 233 aa10.29□□□□□ -0.76
CIT-219ENST00000612548 GTSF1LQ9H1H1 148 aa10.29□□□□□ -0.76
CIT-219ENST00000612548 TRAV9-2A0A087WT02 112 aa10.29□□□□□ -0.76
CIT-219ENST00000612548 DEFB131BA0A096LNP1 70 aa10.29□□□□□ -0.76
CIT-219ENST00000612548 LINC01549A6NIU2 74 aa10.29□□□□□ -0.76
CIT-219ENST00000612548 IGIPA6NJ69 53 aa10.29□□□□□ -0.76
CIT-219ENST00000612548 PRSS1P07477 247 aa10.29□□□□□ -0.76
CIT-219ENST00000612548 Q6ZN92 141 aa10.29□□□□□ -0.76
CIT-219ENST00000612548 ICOSQ9Y6W8 199 aa10.29□□□□□ -0.76
CIT-219ENST00000612548 STAB2Q8WWQ8 2551 aa10.28□□□□□ -0.76
CIT-219ENST00000612548 COL5A1-AS1Q5SY13 56 aa10.28□□□□□ -0.76
CIT-219ENST00000612548 PMCHL2Q9BQD1 86 aa10.28□□□□□ -0.76
CIT-219ENST00000612548 TRBV25-1A0A075B6N4 114 aa10.27□□□□□ -0.77
CIT-219ENST00000612548 HNRNPA3P51991 378 aaKnown RBP10.27□□□□□ -0.77
CIT-219ENST00000612548 MRPL23Q16540 153 aaKnown RBP10.27□□□□□ -0.77
CIT-219ENST00000612548 TIMM17AQ99595 171 aa10.27□□□□□ -0.77
CIT-219ENST00000612548 TRBV6-8A0A0A6YYG3 113 aa10.26□□□□□ -0.77
CIT-219ENST00000612548 LINC01545Q5VT33 79 aa10.26□□□□□ -0.77
CIT-219ENST00000612548 CEMP1Q6PRD7 247 aaPredicted RBP10.26□□□□□ -0.77
CIT-219ENST00000612548 BAALCQ8WXS3 180 aa10.26□□□□□ -0.77
CIT-219ENST00000612548 TMEM141Q96I45 108 aa10.26□□□□□ -0.77
CIT-219ENST00000612548 OPRPNQ99935 248 aaPredicted RBP10.26□□□□□ -0.77
CIT-219ENST00000612548 TMEM243Q9BU79 118 aa10.26□□□□□ -0.77
CIT-219ENST00000612548 MRPS16Q9Y3D3 137 aaKnown RBP10.26□□□□□ -0.77
CIT-219ENST00000612548 NHLRC4P0CG21 123 aaPredicted RBP10.26□□□□□ -0.77
CIT-219ENST00000612548 TMEM97Q5BJF2 176 aa10.26□□□□□ -0.77
CIT-219ENST00000612548 ATOH7Q8N100 152 aa10.26□□□□□ -0.77
CIT-219ENST00000612548 UBE2D4Q9Y2X8 147 aa10.26□□□□□ -0.77
CIT-219ENST00000612548 TRAV10A0A0B4J240 114 aa10.25□□□□□ -0.77
CIT-219ENST00000612548 UBE2L6O14933 153 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms