RNA–Protein interactions for RNA: ENST00000611150.3

CDK11B-205, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best)

Gene CDK11B, Length 2,350 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-205ENST00000611150 DAD1P61803 113 aa12.64□□□□□ -0.39
CDK11B-205ENST00000611150 ZFAND3Q9H8U3 227 aa12.64□□□□□ -0.39
CDK11B-205ENST00000611150 ACACAQ13085 2346 aa12.64□□□□□ -0.39
CDK11B-205ENST00000611150 MRGPRG-AS1Q2M3A8 158 aa12.63□□□□□ -0.39
CDK11B-205ENST00000611150 OVOL2Q9BRP0 275 aa12.63□□□□□ -0.39
CDK11B-205ENST00000611150 Q9HAA7 133 aa12.63□□□□□ -0.39
CDK11B-205ENST00000611150 CFAP47Q6ZTR5 3102 aa12.63□□□□□ -0.39
CDK11B-205ENST00000611150 APC2O95996 2303 aa12.63□□□□□ -0.39
CDK11B-205ENST00000611150 IGHV1-58A0A0C4DH39 117 aa12.63□□□□□ -0.39
CDK11B-205ENST00000611150 A0A0J9YXV3 536 aa12.63□□□□□ -0.39
CDK11B-205ENST00000611150 BUB1B-PAK6H3BSN5 160 aa12.63□□□□□ -0.39
CDK11B-205ENST00000611150 DSPP15924 2871 aaKnown RBP12.62□□□□□ -0.39
CDK11B-205ENST00000611150 PCOLCEQ15113 449 aa12.62□□□□□ -0.39
CDK11B-205ENST00000611150 ENHOQ6UWT2 76 aa12.62□□□□□ -0.39
CDK11B-205ENST00000611150 FAM218AQ96MZ4 157 aa12.62□□□□□ -0.39
CDK11B-205ENST00000611150 Q9UF83 564 aa12.62□□□□□ -0.39
CDK11B-205ENST00000611150 SDK2Q58EX2 2172 aa12.62□□□□□ -0.39
CDK11B-205ENST00000611150 POLR2KP53803 58 aaKnown RBP12.62□□□□□ -0.39
CDK11B-205ENST00000611150 WFDC9Q8NEX5 89 aa12.62□□□□□ -0.39
CDK11B-205ENST00000611150 LAMA5O15230 3695 aa12.61□□□□□ -0.39
CDK11B-205ENST00000611150 PKD1L2Q7Z442 2459 aa12.61□□□□□ -0.39
CDK11B-205ENST00000611150 CFHR1Q03591 330 aa12.61□□□□□ -0.39
CDK11B-205ENST00000611150 FAM229BQ4G0N7 80 aa12.61□□□□□ -0.39
CDK11B-205ENST00000611150 COL27A1Q8IZC6 1860 aaPredicted RBP12.61□□□□□ -0.39
CDK11B-205ENST00000611150 IGHV5-10-1A0A0J9YXX1 117 aa12.61□□□□□ -0.39
CDK11B-205ENST00000611150 SPRR3Q9UBC9 169 aa12.61□□□□□ -0.39
CDK11B-205ENST00000611150 CELSR3Q9NYQ7 3312 aa12.6□□□□□ -0.39
CDK11B-205ENST00000611150 URB1O60287 2271 aaKnown RBP12.6□□□□□ -0.39
CDK11B-205ENST00000611150 PLCE1Q9P212 2302 aa12.6□□□□□ -0.39
CDK11B-205ENST00000611150 ZFHX4Q86UP3 3567 aa12.6□□□□□ -0.39
CDK11B-205ENST00000611150 IGHV4OR15-8A0A075B7B6 117 aa12.59□□□□□ -0.39
CDK11B-205ENST00000611150 A0A087WW49 117 aa12.59□□□□□ -0.39
CDK11B-205ENST00000611150 IGHV1-18A0A0C4DH31 117 aa12.59□□□□□ -0.39
CDK11B-205ENST00000611150 PHLDA3Q9Y5J5 127 aa12.59□□□□□ -0.39
CDK11B-205ENST00000611150 CHD6Q8TD26 2715 aa12.59□□□□□ -0.39
CDK11B-205ENST00000611150 ESRGQ1W209 222 aa12.59□□□□□ -0.39
CDK11B-205ENST00000611150 PRAC2D3DTV9 90 aa12.58□□□□□ -0.4
CDK11B-205ENST00000611150 OPRPNQ99935 248 aaPredicted RBP12.58□□□□□ -0.4
CDK11B-205ENST00000611150 S100A4P26447 101 aaKnown RBP12.58□□□□□ -0.4
CDK11B-205ENST00000611150 DEFB104AQ8WTQ1 72 aa12.58□□□□□ -0.4
CDK11B-205ENST00000611150 RBM12B-AS1Q9P1G2 102 aa12.58□□□□□ -0.4
CDK11B-205ENST00000611150 TEX22C9J3V5 150 aa12.57□□□□□ -0.4
CDK11B-205ENST00000611150 C6orf223Q8N319 242 aa12.57□□□□□ -0.4
CDK11B-205ENST00000611150 K7EIM0 57 aa12.57□□□□□ -0.4
CDK11B-205ENST00000611150 C9orf129Q5T035 196 aaKnown RBP12.56□□□□□ -0.4
CDK11B-205ENST00000611150 ABCA1O95477 2261 aa12.56□□□□□ -0.4
CDK11B-205ENST00000611150 ITPR1Q14643 2758 aa12.56□□□□□ -0.4
CDK11B-205ENST00000611150 RNASE4P34096 147 aaKnown RBP12.56□□□□□ -0.4
CDK11B-205ENST00000611150 LINC00308Q8TCZ7 52 aa12.56□□□□□ -0.4
CDK11B-205ENST00000611150 SMAD5-AS1Q9Y6J3 95 aa12.56□□□□□ -0.4
CDK11B-205ENST00000611150 NBEAQ8NFP9 2946 aa12.55□□□□□ -0.4
CDK11B-205ENST00000611150 A0A1W2PNU3 283 aaPredicted RBP12.55□□□□□ -0.4
CDK11B-205ENST00000611150 LY6G5BQ8NDX9 201 aa12.55□□□□□ -0.4
CDK11B-205ENST00000611150 TM2D3Q9BRN9 247 aa12.55□□□□□ -0.4
CDK11B-205ENST00000611150 FAM208BQ5VWN6 2430 aa12.54□□□□□ -0.4
CDK11B-205ENST00000611150 NDUFB3O43676 98 aa12.54□□□□□ -0.4
CDK11B-205ENST00000611150 CCL13Q99616 98 aa12.54□□□□□ -0.4
CDK11B-205ENST00000611150 HIST2H2BCQ6DN03 193 aa12.53□□□□□ -0.4
CDK11B-205ENST00000611150 HIST2H2BDQ6DRA6 164 aa12.53□□□□□ -0.4
CDK11B-205ENST00000611150 HES7Q9BYE0 225 aa12.53□□□□□ -0.4
CDK11B-205ENST00000611150 MIFP14174 115 aa12.52□□□□□ -0.4
CDK11B-205ENST00000611150 FOLR3P41439 243 aa12.52□□□□□ -0.4
CDK11B-205ENST00000611150 C11orf45Q8TAV5 145 aa12.52□□□□□ -0.4
CDK11B-205ENST00000611150 HOXD3P31249 432 aaPredicted RBP12.52□□□□□ -0.41
CDK11B-205ENST00000611150 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.52□□□□□ -0.41
CDK11B-205ENST00000611150 ZFYVE26Q68DK2 2539 aa12.52□□□□□ -0.41
CDK11B-205ENST00000611150 PIK3CD-AS1Q5SR53 167 aa12.51□□□□□ -0.41
CDK11B-205ENST00000611150 UBL5Q9BZL1 73 aa12.51□□□□□ -0.41
CDK11B-205ENST00000611150 ARHGAP32A7KAX9 2087 aa12.51□□□□□ -0.41
CDK11B-205ENST00000611150 IGLV4-3A0A075B6K6 122 aa12.5□□□□□ -0.41
CDK11B-205ENST00000611150 MED14OSP0DP75 135 aa12.5□□□□□ -0.41
CDK11B-205ENST00000611150 KTN1-AS1Q86SY8 53 aa12.5□□□□□ -0.41
CDK11B-205ENST00000611150 NCR3O14931 201 aa12.49□□□□□ -0.41
CDK11B-205ENST00000611150 C15orf32Q32M92 178 aa12.49□□□□□ -0.41
CDK11B-205ENST00000611150 VMO1Q7Z5L0 202 aa12.49□□□□□ -0.41
CDK11B-205ENST00000611150 ZNF625Q96I27 306 aaPredicted RBP12.49□□□□□ -0.41
CDK11B-205ENST00000611150 UBE2E2Q96LR5 201 aa12.49□□□□□ -0.41
CDK11B-205ENST00000611150 MALRD1Q5VYJ5 2156 aa12.49□□□□□ -0.41
CDK11B-205ENST00000611150 DYNLRB2Q8TF09 96 aa12.49□□□□□ -0.41
CDK11B-205ENST00000611150 MRPL53Q96EL3 112 aaKnown RBP12.49□□□□□ -0.41
CDK11B-205ENST00000611150 A0A087WZ39 114 aa12.48□□□□□ -0.41
CDK11B-205ENST00000611150 C9orf47Q6ZRZ4 202 aa12.48□□□□□ -0.41
CDK11B-205ENST00000611150 PTPRQQ9UMZ3 2332 aa12.48□□□□□ -0.41
CDK11B-205ENST00000611150 APOC4P55056 127 aa12.48□□□□□ -0.41
CDK11B-205ENST00000611150 SUMO4Q6EEV6 95 aa12.48□□□□□ -0.41
CDK11B-205ENST00000611150 CCDC140Q96MF4 163 aa12.48□□□□□ -0.41
CDK11B-205ENST00000611150 GAFA1Q96PS6 74 aa12.48□□□□□ -0.41
CDK11B-205ENST00000611150 C11orf68Q9H3H3 251 aaKnown RBP12.48□□□□□ -0.41
CDK11B-205ENST00000611150 IGHV3-72A0A0B4J1Y9 119 aa12.47□□□□□ -0.41
CDK11B-205ENST00000611150 NDUFA1O15239 70 aa12.47□□□□□ -0.41
CDK11B-205ENST00000611150 TRBV6-5A0A0K0K1A5 114 aa12.47□□□□□ -0.41
CDK11B-205ENST00000611150 PF4P02776 101 aa12.47□□□□□ -0.41
CDK11B-205ENST00000611150 C20orf203Q8NBC4 194 aa12.47□□□□□ -0.41
CDK11B-205ENST00000611150 LOC400499M0QZD8 3231 aa12.46□□□□□ -0.41
CDK11B-205ENST00000611150 F5H697 171 aa12.45□□□□□ -0.42
CDK11B-205ENST00000611150 LINC00315P59091 139 aa12.45□□□□□ -0.42
CDK11B-205ENST00000611150 IGSF10Q6WRI0 2623 aa12.45□□□□□ -0.42
CDK11B-205ENST00000611150 CCL4P13236 92 aa12.45□□□□□ -0.42
CDK11B-205ENST00000611150 KIF25-AS1Q9Y6Z4 181 aa12.45□□□□□ -0.42
CDK11B-205ENST00000611150 RPL11P62913 178 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms