RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 A8MWL6 223 aa8.97□□□□□ -0.97
CTSA-218ENST00000607814 H7C1H1 209 aa8.97□□□□□ -0.97
CTSA-218ENST00000607814 GAS8-AS1O95177 125 aa8.97□□□□□ -0.97
CTSA-218ENST00000607814 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.97□□□□□ -0.97
CTSA-218ENST00000607814 CNFNQ9BYD5 112 aa8.97□□□□□ -0.97
CTSA-218ENST00000607814 NIT2Q9NQR4 276 aa8.97□□□□□ -0.97
CTSA-218ENST00000607814 PLA2G2DQ9UNK4 145 aa8.97□□□□□ -0.97
CTSA-218ENST00000607814 TRBV25-1A0A075B6N4 114 aa8.96□□□□□ -0.98
CTSA-218ENST00000607814 RPL23P62829 140 aaKnown RBP8.96□□□□□ -0.98
CTSA-218ENST00000607814 RBX1P62877 108 aa8.96□□□□□ -0.98
CTSA-218ENST00000607814 TMEM241Q24JQ0 296 aa8.96□□□□□ -0.98
CTSA-218ENST00000607814 LINC01620Q4KN68 170 aa8.96□□□□□ -0.98
CTSA-218ENST00000607814 IGHV1-24A0A0C4DH33 117 aa8.95□□□□□ -0.98
CTSA-218ENST00000607814 HIGD1CA8MV81 97 aa8.95□□□□□ -0.98
CTSA-218ENST00000607814 OXTP01178 125 aa8.95□□□□□ -0.98
CTSA-218ENST00000607814 ELOBQ15370 118 aa8.95□□□□□ -0.98
CTSA-218ENST00000607814 ADIRFQ15847 76 aa8.95□□□□□ -0.98
CTSA-218ENST00000607814 SLC7A5P1Q8MH63 180 aa8.95□□□□□ -0.98
CTSA-218ENST00000607814 TSKUQ8WUA8 353 aa8.95□□□□□ -0.98
CTSA-218ENST00000607814 FAM30AQ9NZY2 134 aa8.95□□□□□ -0.98
CTSA-218ENST00000607814 V9GYV3 84 aa8.95□□□□□ -0.98
CTSA-218ENST00000607814 IQCJQ1A5X6 159 aa8.94□□□□□ -0.98
CTSA-218ENST00000607814 Q6ZSA8 131 aa8.94□□□□□ -0.98
CTSA-218ENST00000607814 LINC00528Q8N1L1 170 aa8.94□□□□□ -0.98
CTSA-218ENST00000607814 LINC00269Q8N2A0 174 aa8.94□□□□□ -0.98
CTSA-218ENST00000607814 ISOC2Q96AB3 205 aa8.94□□□□□ -0.98
CTSA-218ENST00000607814 CHCHD7Q9BUK0 85 aa8.94□□□□□ -0.98
CTSA-218ENST00000607814 OSTCQ9NRP0 149 aa8.94□□□□□ -0.98
CTSA-218ENST00000607814 FAT3Q8TDW7 4589 aa8.94□□□□□ -0.98
CTSA-218ENST00000607814 IGLV4-60A0A075B6I1 120 aa8.93□□□□□ -0.98
CTSA-218ENST00000607814 CRPP02741 224 aa8.93□□□□□ -0.98
CTSA-218ENST00000607814 S100A1P23297 94 aa8.93□□□□□ -0.98
CTSA-218ENST00000607814 TMEM97Q5BJF2 176 aa8.93□□□□□ -0.98
CTSA-218ENST00000607814 CT83Q5H943 113 aa8.93□□□□□ -0.98
CTSA-218ENST00000607814 SMIM15Q7Z3B0 74 aa8.93□□□□□ -0.98
CTSA-218ENST00000607814 RMI2Q96E14 147 aa8.93□□□□□ -0.98
CTSA-218ENST00000607814 GFRA4Q9GZZ7 299 aa8.93□□□□□ -0.98
CTSA-218ENST00000607814 IGLV10-54A0A075B6I4 117 aa8.92□□□□□ -0.98
CTSA-218ENST00000607814 C20orf203Q8NBC4 194 aa8.92□□□□□ -0.98
CTSA-218ENST00000607814 NUP35Q8NFH5 326 aa8.92□□□□□ -0.98
CTSA-218ENST00000607814 BORCS7Q96B45 105 aa8.92□□□□□ -0.98
CTSA-218ENST00000607814 RNF185Q96GF1 192 aa8.92□□□□□ -0.98
CTSA-218ENST00000607814 TMEM243Q9BU79 118 aa8.92□□□□□ -0.98
CTSA-218ENST00000607814 C1orf43Q9BWL3 253 aa8.92□□□□□ -0.98
CTSA-218ENST00000607814 NAT8Q9UHE5 227 aa8.92□□□□□ -0.98
CTSA-218ENST00000607814 A0A1B0GUT8 65 aa8.91□□□□□ -0.98
CTSA-218ENST00000607814 TMEM218A2RU14 115 aa8.91□□□□□ -0.98
CTSA-218ENST00000607814 SMKR1H3BMG3 65 aa8.91□□□□□ -0.98
CTSA-218ENST00000607814 HLA-DQA1P01909 254 aa8.91□□□□□ -0.98
CTSA-218ENST00000607814 AMTP48728 403 aa8.91□□□□□ -0.98
CTSA-218ENST00000607814 Q0VG73 95 aa8.91□□□□□ -0.98
CTSA-218ENST00000607814 COTL1Q14019 142 aa8.91□□□□□ -0.98
CTSA-218ENST00000607814 FAM74A3Q4VXF1 159 aa8.91□□□□□ -0.98
CTSA-218ENST00000607814 AMN1Q8IY45 258 aa8.91□□□□□ -0.98
CTSA-218ENST00000607814 IGKV3OR2-268A0A0C4DH90 116 aa8.9□□□□□ -0.98
CTSA-218ENST00000607814 RPS10P46783 165 aaKnown RBP8.9□□□□□ -0.98
CTSA-218ENST00000607814 SEC11CQ9BY50 192 aa8.9□□□□□ -0.98
CTSA-218ENST00000607814 COX11Q9Y6N1 276 aa8.9□□□□□ -0.98
CTSA-218ENST00000607814 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.89□□□□□ -0.99
CTSA-218ENST00000607814 IGKV2-29A2NJV5 120 aaPredicted RBP8.89□□□□□ -0.99
CTSA-218ENST00000607814 SDHAF1A6NFY7 115 aa8.89□□□□□ -0.99
CTSA-218ENST00000607814 ATP6V1G1O75348 118 aa8.89□□□□□ -0.99
CTSA-218ENST00000607814 NCR2O95944 276 aa8.89□□□□□ -0.99
CTSA-218ENST00000607814 RAB4AP20338 218 aa8.89□□□□□ -0.99
CTSA-218ENST00000607814 REG3AQ06141 175 aa8.89□□□□□ -0.99
CTSA-218ENST00000607814 PRR34Q9NV39 138 aa8.89□□□□□ -0.99
CTSA-218ENST00000607814 UBE2L6O14933 153 aa8.88□□□□□ -0.99
CTSA-218ENST00000607814 KRTAP26-1Q6PEX3 210 aa8.88□□□□□ -0.99
CTSA-218ENST00000607814 TMEM191AQ9H0A3 160 aa8.88□□□□□ -0.99
CTSA-218ENST00000607814 RNF213Q63HN8 5207 aa8.88□□□□□ -0.99
CTSA-218ENST00000607814 USP17L23D6RBM5 183 aa8.87□□□□□ -0.99
CTSA-218ENST00000607814 F8W036 122 aa8.87□□□□□ -0.99
CTSA-218ENST00000607814 PMCHP20382 165 aa8.87□□□□□ -0.99
CTSA-218ENST00000607814 CAMPP49913 170 aa8.87□□□□□ -0.99
CTSA-218ENST00000607814 PKIAP61925 76 aa8.87□□□□□ -0.99
CTSA-218ENST00000607814 RIGQ13278 110 aa8.87□□□□□ -0.99
CTSA-218ENST00000607814 MIAQ16674 131 aa8.87□□□□□ -0.99
CTSA-218ENST00000607814 C10orf91Q5T1B1 145 aa8.87□□□□□ -0.99
CTSA-218ENST00000607814 NAT8BQ9UHF3 227 aa8.87□□□□□ -0.99
CTSA-218ENST00000607814 CARHSP1Q9Y2V2 147 aaKnown RBP8.87□□□□□ -0.99
CTSA-218ENST00000607814 FAM231BA6NCW3 169 aa8.86□□□□□ -0.99
CTSA-218ENST00000607814 MRPL54Q6P161 138 aaKnown RBP8.86□□□□□ -0.99
CTSA-218ENST00000607814 TMEM242Q9NWH2 141 aa8.86□□□□□ -0.99
CTSA-218ENST00000607814 SMIM27A0A1W2PRY6 76 aa8.85□□□□□ -0.99
CTSA-218ENST00000607814 APCSP02743 223 aa8.85□□□□□ -0.99
CTSA-218ENST00000607814 KRTAP10-4P60372 401 aaPredicted RBP8.85□□□□□ -0.99
CTSA-218ENST00000607814 RNASEKQ6P5S7 137 aaKnown RBP8.85□□□□□ -0.99
CTSA-218ENST00000607814 ST20Q9HBF5 79 aa8.85□□□□□ -0.99
CTSA-218ENST00000607814 PKHD1L1Q86WI1 4243 aa8.85□□□□□ -0.99
CTSA-218ENST00000607814 TRBV6-5A0A0K0K1A5 114 aa8.84□□□□□ -0.99
CTSA-218ENST00000607814 A0A1B0GUV1 79 aa8.84□□□□□ -0.99
CTSA-218ENST00000607814 I3L3M4 83 aa8.84□□□□□ -0.99
CTSA-218ENST00000607814 TSHBP01222 138 aa8.84□□□□□ -0.99
CTSA-218ENST00000607814 PRSS1P07477 247 aa8.84□□□□□ -0.99
CTSA-218ENST00000607814 PNRC1Q12796 327 aaPredicted RBP8.84□□□□□ -0.99
CTSA-218ENST00000607814 AMMECR1LQ6DCA0 310 aa8.84□□□□□ -0.99
CTSA-218ENST00000607814 FGF6P10767 208 aa8.83□□□□□ -1
CTSA-218ENST00000607814 MRPL51Q4U2R6 128 aaKnown RBP8.83□□□□□ -1
CTSA-218ENST00000607814 SCXQ7RTU7 201 aa8.83□□□□□ -1
CTSA-218ENST00000607814 SVBPQ8N300 66 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms