RNA–Protein interactions for RNA: ENST00000605424.5

MMP28-201, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MMP28, Length 1,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-201ENST00000605424 CCL25O15444 150 aa14.35□□□□□ -0.11
MMP28-201ENST00000605424 Q6ZSN1 163 aa14.35□□□□□ -0.11
MMP28-201ENST00000605424 NACAE9PAV3 2078 aa14.35□□□□□ -0.11
MMP28-201ENST00000605424 IGHV3OR16-12A0A075B7B8 117 aa14.34□□□□□ -0.11
MMP28-201ENST00000605424 C9orf118A6NHY6 69 aa14.34□□□□□ -0.11
MMP28-201ENST00000605424 GCSHP23434 173 aa14.34□□□□□ -0.11
MMP28-201ENST00000605424 WNK1Q9H4A3 2382 aa14.33□□□□□ -0.11
MMP28-201ENST00000605424 VCX2Q9H322 139 aa14.33□□□□□ -0.11
MMP28-201ENST00000605424 IGLV4-3A0A075B6K6 122 aa14.33□□□□□ -0.12
MMP28-201ENST00000605424 SMIM13P0DJ93 91 aa14.32□□□□□ -0.12
MMP28-201ENST00000605424 DAZ2Q13117 558 aaKnown RBP14.32□□□□□ -0.12
MMP28-201ENST00000605424 OR4C5Q8NGB2 326 aa14.32□□□□□ -0.12
MMP28-201ENST00000605424 GIG44P09565 113 aaPredicted RBP14.31□□□□□ -0.12
MMP28-201ENST00000605424 ZNRF2Q8NHG8 242 aa14.31□□□□□ -0.12
MMP28-201ENST00000605424 SETD2Q9BYW2 2564 aaPredicted RBP14.31□□□□□ -0.12
MMP28-201ENST00000605424 TRGV1A0A0A0MS02 117 aa14.31□□□□□ -0.12
MMP28-201ENST00000605424 FXYD2P54710 66 aa14.31□□□□□ -0.12
MMP28-201ENST00000605424 KRTAP10-3P60369 221 aa14.31□□□□□ -0.12
MMP28-201ENST00000605424 C16orf74Q96GX8 76 aa14.31□□□□□ -0.12
MMP28-201ENST00000605424 SPANXA1Q9NS26 97 aa14.31□□□□□ -0.12
MMP28-201ENST00000605424 PF4P02776 101 aa14.3□□□□□ -0.12
MMP28-201ENST00000605424 TMEM170BQ5T4T1 132 aa14.3□□□□□ -0.12
MMP28-201ENST00000605424 AMMECR1LQ6DCA0 310 aa14.3□□□□□ -0.12
MMP28-201ENST00000605424 TRAV4A0A0B4J268 109 aa14.29□□□□□ -0.12
MMP28-201ENST00000605424 TRBV10-1A0A0K0K1A3 114 aa14.29□□□□□ -0.12
MMP28-201ENST00000605424 ZNF815PA8K554 130 aa14.29□□□□□ -0.12
MMP28-201ENST00000605424 EMP1P54849 157 aa14.29□□□□□ -0.12
MMP28-201ENST00000605424 COTL1Q14019 142 aa14.29□□□□□ -0.12
MMP28-201ENST00000605424 LINC00482Q8N8I6 264 aa14.29□□□□□ -0.12
MMP28-201ENST00000605424 AMELXQ99217 191 aa14.29□□□□□ -0.12
MMP28-201ENST00000605424 HIST1H4GQ99525 98 aa14.29□□□□□ -0.12
MMP28-201ENST00000605424 OPRPNQ99935 248 aaPredicted RBP14.29□□□□□ -0.12
MMP28-201ENST00000605424 CHCHD7Q9BUK0 85 aa14.29□□□□□ -0.12
MMP28-201ENST00000605424 JMJD1CQ15652 2540 aa14.29□□□□□ -0.12
MMP28-201ENST00000605424 CIDEAO60543 219 aa14.29□□□□□ -0.12
MMP28-201ENST00000605424 TRBV7-3A0A075B6L6 115 aa14.28□□□□□ -0.12
MMP28-201ENST00000605424 CSNK1G2-AS1Q8NCQ2 148 aa14.27□□□□□ -0.12
MMP28-201ENST00000605424 Q9UF83 564 aa14.27□□□□□ -0.12
MMP28-201ENST00000605424 INSL3P51460 131 aa14.26□□□□□ -0.13
MMP28-201ENST00000605424 WFDC10AQ9H1F0 79 aa14.26□□□□□ -0.13
MMP28-201ENST00000605424 TMEM223A0PJW6 202 aa14.25□□□□□ -0.13
MMP28-201ENST00000605424 CRLF1O75462 422 aa14.25□□□□□ -0.13
MMP28-201ENST00000605424 RPL35AP18077 110 aaKnown RBP14.25□□□□□ -0.13
MMP28-201ENST00000605424 SCGB1D4Q6XE38 83 aa14.25□□□□□ -0.13
MMP28-201ENST00000605424 Q6ZTI0 123 aa14.25□□□□□ -0.13
MMP28-201ENST00000605424 UBE2D4Q9Y2X8 147 aa14.25□□□□□ -0.13
MMP28-201ENST00000605424 H3BUT2 72 aa14.25□□□□□ -0.13
MMP28-201ENST00000605424 FAM104AQ969W3 186 aa14.25□□□□□ -0.13
MMP28-201ENST00000605424 ZNF479Q96JC4 524 aa14.25□□□□□ -0.13
MMP28-201ENST00000605424 OVOL2Q9BRP0 275 aa14.25□□□□□ -0.13
MMP28-201ENST00000605424 K7EQD1 137 aa14.24□□□□□ -0.13
MMP28-201ENST00000605424 LEPROTO15243 131 aa14.24□□□□□ -0.13
MMP28-201ENST00000605424 MRPS36P82909 103 aaKnown RBP14.24□□□□□ -0.13
MMP28-201ENST00000605424 RPL36AP83881 106 aaKnown RBP14.24□□□□□ -0.13
MMP28-201ENST00000605424 GTF2H5Q6ZYL4 71 aa14.24□□□□□ -0.13
MMP28-201ENST00000605424 RPL36ALQ969Q0 106 aaKnown RBP14.24□□□□□ -0.13
MMP28-201ENST00000605424 TIMM21Q9BVV7 248 aa14.24□□□□□ -0.13
MMP28-201ENST00000605424 K7EP13 123 aa14.23□□□□□ -0.13
MMP28-201ENST00000605424 ZNF22P17026 224 aaPredicted RBP14.23□□□□□ -0.13
MMP28-201ENST00000605424 RRN3P1Q2M238 152 aa14.23□□□□□ -0.13
MMP28-201ENST00000605424 RAB37Q96AX2 223 aa14.23□□□□□ -0.13
MMP28-201ENST00000605424 NOP10Q9NPE3 64 aaKnown RBP14.23□□□□□ -0.13
MMP28-201ENST00000605424 NHP2Q9NX24 153 aaKnown RBP14.23□□□□□ -0.13
MMP28-201ENST00000605424 PLAC8L1A1L4L8 177 aa14.23□□□□□ -0.13
MMP28-201ENST00000605424 GAGE10A6NGK3 116 aa14.23□□□□□ -0.13
MMP28-201ENST00000605424 J3QQQ9 107 aa14.23□□□□□ -0.13
MMP28-201ENST00000605424 DAZ4Q86SG3 579 aaKnown RBP14.23□□□□□ -0.13
MMP28-201ENST00000605424 PHLDA1Q8WV24 401 aaPredicted RBP14.23□□□□□ -0.13
MMP28-201ENST00000605424 DAZ3Q9NR90 486 aaKnown RBP14.23□□□□□ -0.13
MMP28-201ENST00000605424 A0A0J9YXV3 536 aa14.22□□□□□ -0.13
MMP28-201ENST00000605424 LGALS3P17931 250 aaKnown RBP14.22□□□□□ -0.13
MMP28-201ENST00000605424 A0A1W2PPM0 123 aa14.21□□□□□ -0.13
MMP28-201ENST00000605424 PLEKHB2Q96CS7 222 aa14.21□□□□□ -0.13
MMP28-201ENST00000605424 A0A1B0GWB2 263 aa14.21□□□□□ -0.14
MMP28-201ENST00000605424 SPANXB1Q9NS25 103 aaPredicted RBP14.21□□□□□ -0.14
MMP28-201ENST00000605424 IGHV3-38A0A0C4DH36 116 aa14.2□□□□□ -0.14
MMP28-201ENST00000605424 A0A0J9YY99 117 aa14.2□□□□□ -0.14
MMP28-201ENST00000605424 TMEM238LA0A1B0GVL6 79 aa14.2□□□□□ -0.14
MMP28-201ENST00000605424 A6NJY4 79 aa14.2□□□□□ -0.14
MMP28-201ENST00000605424 C12orf74Q32Q52 190 aa14.2□□□□□ -0.14
MMP28-201ENST00000605424 SAMD5Q5TGI4 173 aa14.2□□□□□ -0.14
MMP28-201ENST00000605424 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.19□□□□□ -0.14
MMP28-201ENST00000605424 TINCRA0A1B0GVN0 87 aa14.19□□□□□ -0.14
MMP28-201ENST00000605424 IGKV2-29A2NJV5 120 aaPredicted RBP14.19□□□□□ -0.14
MMP28-201ENST00000605424 C9orf66Q5T8R8 295 aa14.19□□□□□ -0.14
MMP28-201ENST00000605424 FABP2P12104 132 aa14.19□□□□□ -0.14
MMP28-201ENST00000605424 TSPEAR-AS2P59090 65 aa14.19□□□□□ -0.14
MMP28-201ENST00000605424 SRSF9Q13242 221 aaKnown RBP eCLIP14.19□□□□□ -0.14
MMP28-201ENST00000605424 SLC25A29Q8N8R3 303 aa14.19□□□□□ -0.14
MMP28-201ENST00000605424 OR5A1Q8NGJ0 315 aa14.19□□□□□ -0.14
MMP28-201ENST00000605424 K7EP34 96 aa14.18□□□□□ -0.14
MMP28-201ENST00000605424 SMAGPQ0VAQ4 97 aa14.18□□□□□ -0.14
MMP28-201ENST00000605424 CEMP1Q6PRD7 247 aaPredicted RBP14.18□□□□□ -0.14
MMP28-201ENST00000605424 C2CD3Q4AC94 2353 aa14.18□□□□□ -0.14
MMP28-201ENST00000605424 TRGV2A0A075B6R0 118 aa14.17□□□□□ -0.14
MMP28-201ENST00000605424 TRBV6-4A0A1B0GX49 114 aa14.17□□□□□ -0.14
MMP28-201ENST00000605424 UBE2D3P61077 147 aa14.17□□□□□ -0.14
MMP28-201ENST00000605424 UBE2D2P62837 147 aa14.17□□□□□ -0.14
MMP28-201ENST00000605424 CSDC2Q9Y534 153 aaKnown RBP14.17□□□□□ -0.14
MMP28-201ENST00000605424 K7ERJ3 54 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms