RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 C18orf65Q6ZTR6 163 aa3.57□□□□□ -1.84
SPTBN1-206ENST00000602898 FAM216BQ8N7L0 139 aa3.57□□□□□ -1.84
SPTBN1-206ENST00000602898 IGLV2-18A0A075B6J9 118 aa3.56□□□□□ -1.84
SPTBN1-206ENST00000602898 E7EUB6 86 aa3.56□□□□□ -1.84
SPTBN1-206ENST00000602898 LEPROTO15243 131 aa3.56□□□□□ -1.84
SPTBN1-206ENST00000602898 FAM53AQ6NSI3 398 aaPredicted RBP3.56□□□□□ -1.84
SPTBN1-206ENST00000602898 MPLKIPQ8TAP9 179 aa3.56□□□□□ -1.84
SPTBN1-206ENST00000602898 OPRPNQ99935 248 aaPredicted RBP3.56□□□□□ -1.84
SPTBN1-206ENST00000602898 REV3LO60673 3130 aa3.56□□□□□ -1.84
SPTBN1-206ENST00000602898 IGLV3-32A0A0A0MS00 114 aa3.56□□□□□ -1.84
SPTBN1-206ENST00000602898 ESPL1Q14674 2120 aa3.56□□□□□ -1.84
SPTBN1-206ENST00000602898 ESRGQ1W209 222 aa3.56□□□□□ -1.84
SPTBN1-206ENST00000602898 ZDBF2Q9HCK1 2354 aa3.55□□□□□ -1.84
SPTBN1-206ENST00000602898 UNC13CQ8NB66 2214 aa3.55□□□□□ -1.84
SPTBN1-206ENST00000602898 IGKV1OR2-108A0A075B7D4 117 aa3.55□□□□□ -1.84
SPTBN1-206ENST00000602898 A0A087WVE0 104 aa3.55□□□□□ -1.84
SPTBN1-206ENST00000602898 IGHV1-45A0A0A0MS14 117 aa3.55□□□□□ -1.84
SPTBN1-206ENST00000602898 F8WEM9 126 aa3.55□□□□□ -1.84
SPTBN1-206ENST00000602898 COX7A1P24310 79 aa3.55□□□□□ -1.84
SPTBN1-206ENST00000602898 IGHV3-15A0A0B4J1V0 119 aa3.55□□□□□ -1.84
SPTBN1-206ENST00000602898 Q1T7F1 81 aa3.55□□□□□ -1.84
SPTBN1-206ENST00000602898 Q6YL49 198 aa3.55□□□□□ -1.84
SPTBN1-206ENST00000602898 C7orf65Q6ZTY9 151 aa3.55□□□□□ -1.84
SPTBN1-206ENST00000602898 TRANK1O15050 2925 aa3.55□□□□□ -1.84
SPTBN1-206ENST00000602898 USF3Q68DE3 2245 aa3.55□□□□□ -1.84
SPTBN1-206ENST00000602898 IGKV3D-7A0A0C4DH55 119 aa3.54□□□□□ -1.84
SPTBN1-206ENST00000602898 TRBV10-3A0A0K0K1G6 114 aa3.54□□□□□ -1.84
SPTBN1-206ENST00000602898 IGHV3-48P01763 117 aa3.54□□□□□ -1.84
SPTBN1-206ENST00000602898 CGB3P0DN86 165 aa3.54□□□□□ -1.84
SPTBN1-206ENST00000602898 CGB7P0DN87 165 aa3.54□□□□□ -1.84
SPTBN1-206ENST00000602898 LCE3BQ5TA77 95 aa3.54□□□□□ -1.84
SPTBN1-206ENST00000602898 ZNF826PQ6ZT77 177 aa3.54□□□□□ -1.84
SPTBN1-206ENST00000602898 NOTCH2NLQ7Z3S9 236 aa3.54□□□□□ -1.84
SPTBN1-206ENST00000602898 VMO1Q7Z5L0 202 aa3.54□□□□□ -1.84
SPTBN1-206ENST00000602898 MUC4Q99102 2169 aa3.54□□□□□ -1.84
SPTBN1-206ENST00000602898 IGLV5-37A0A075B6J1 123 aa3.54□□□□□ -1.84
SPTBN1-206ENST00000602898 IGKV1D-17A0A075B6S4 117 aa3.54□□□□□ -1.84
SPTBN1-206ENST00000602898 A0A0J9YX75 114 aa3.54□□□□□ -1.84
SPTBN1-206ENST00000602898 A0A0J9YXY3 114 aa3.54□□□□□ -1.84
SPTBN1-206ENST00000602898 KRTAP23-1A1A580 65 aa3.54□□□□□ -1.84
SPTBN1-206ENST00000602898 TFF1P04155 84 aa3.54□□□□□ -1.84
SPTBN1-206ENST00000602898 BLCAPP62952 87 aa3.54□□□□□ -1.84
SPTBN1-206ENST00000602898 Q0VFX4 171 aa3.54□□□□□ -1.84
SPTBN1-206ENST00000602898 FAM229BQ4G0N7 80 aa3.54□□□□□ -1.84
SPTBN1-206ENST00000602898 CLEC2BQ92478 149 aa3.54□□□□□ -1.84
SPTBN1-206ENST00000602898 DIRC1Q969H9 104 aa3.54□□□□□ -1.84
SPTBN1-206ENST00000602898 BPESC1Q9GZL8 116 aa3.54□□□□□ -1.84
SPTBN1-206ENST00000602898 PTPRZ1P23471 2315 aaPredicted RBP3.54□□□□□ -1.84
SPTBN1-206ENST00000602898 ASH1LQ9NR48 2969 aaKnown RBP3.54□□□□□ -1.84
SPTBN1-206ENST00000602898 E7EQL1 145 aa3.54□□□□□ -1.84
SPTBN1-206ENST00000602898 DNAL4O96015 105 aa3.54□□□□□ -1.84
SPTBN1-206ENST00000602898 LYZL1Q6UWQ5 148 aa3.54□□□□□ -1.84
SPTBN1-206ENST00000602898 KLHL30-AS1Q8NEE0 82 aa3.54□□□□□ -1.84
SPTBN1-206ENST00000602898 AMELXQ99217 191 aa3.54□□□□□ -1.84
SPTBN1-206ENST00000602898 CACNA1DQ01668 2161 aa3.53□□□□□ -1.84
SPTBN1-206ENST00000602898 COL27A1Q8IZC6 1860 aaPredicted RBP3.53□□□□□ -1.84
SPTBN1-206ENST00000602898 OTOGLQ3ZCN5 2332 aa3.53□□□□□ -1.84
SPTBN1-206ENST00000602898 SDHAF1A6NFY7 115 aa3.53□□□□□ -1.84
SPTBN1-206ENST00000602898 MUSTN1Q8IVN3 82 aa3.53□□□□□ -1.84
SPTBN1-206ENST00000602898 Q8IYB0 196 aa3.53□□□□□ -1.84
SPTBN1-206ENST00000602898 MED12Q93074 2177 aa3.53□□□□□ -1.84
SPTBN1-206ENST00000602898 C11orf86A6NJI1 115 aa3.53□□□□□ -1.84
SPTBN1-206ENST00000602898 EGFEM1PQ0D2K5 195 aa3.53□□□□□ -1.84
SPTBN1-206ENST00000602898 C10orf113Q5VZT2 155 aa3.53□□□□□ -1.84
SPTBN1-206ENST00000602898 C14orf178Q8N769 122 aaPredicted RBP3.53□□□□□ -1.84
SPTBN1-206ENST00000602898 CNFNQ9BYD5 112 aa3.53□□□□□ -1.84
SPTBN1-206ENST00000602898 RP1P56715 2156 aa3.53□□□□□ -1.84
SPTBN1-206ENST00000602898 FAM186AA6NE01 2351 aa3.52□□□□□ -1.85
SPTBN1-206ENST00000602898 I3L3M4 83 aa3.52□□□□□ -1.85
SPTBN1-206ENST00000602898 M0R3E3 92 aa3.52□□□□□ -1.85
SPTBN1-206ENST00000602898 IGLV2-11P01706 119 aa3.52□□□□□ -1.85
SPTBN1-206ENST00000602898 Q8N1X5 172 aa3.52□□□□□ -1.85
SPTBN1-206ENST00000602898 DYNLRB2Q8TF09 96 aa3.52□□□□□ -1.85
SPTBN1-206ENST00000602898 INTS1Q8N201 2190 aaKnown RBP3.52□□□□□ -1.85
SPTBN1-206ENST00000602898 SPTBN4Q9H254 2564 aa3.52□□□□□ -1.85
SPTBN1-206ENST00000602898 IGHV3-43A0A0B4J1X8 118 aa3.52□□□□□ -1.85
SPTBN1-206ENST00000602898 PROP1O75360 226 aa3.52□□□□□ -1.85
SPTBN1-206ENST00000602898 MIFP14174 115 aa3.52□□□□□ -1.85
SPTBN1-206ENST00000602898 RPL28P46779 137 aaKnown RBP3.52□□□□□ -1.85
SPTBN1-206ENST00000602898 KLF14Q8TD94 323 aaPredicted RBP3.52□□□□□ -1.85
SPTBN1-206ENST00000602898 IMMP1LQ96LU5 166 aa3.52□□□□□ -1.85
SPTBN1-206ENST00000602898 SCGB3A1Q96QR1 104 aa3.52□□□□□ -1.85
SPTBN1-206ENST00000602898 PHLDA3Q9Y5J5 127 aa3.52□□□□□ -1.85
SPTBN1-206ENST00000602898 WDFY4Q6ZS81 3184 aa3.51□□□□□ -1.85
SPTBN1-206ENST00000602898 DEFB108AA8MXU0 73 aa3.51□□□□□ -1.85
SPTBN1-206ENST00000602898 PATE2Q6UY27 113 aa3.51□□□□□ -1.85
SPTBN1-206ENST00000602898 TMEM14BQ9NUH8 114 aa3.51□□□□□ -1.85
SPTBN1-206ENST00000602898 A6NED7 52 aa3.51□□□□□ -1.85
SPTBN1-206ENST00000602898 IGIPA6NJ69 53 aa3.51□□□□□ -1.85
SPTBN1-206ENST00000602898 SH2D1AO60880 128 aa3.51□□□□□ -1.85
SPTBN1-206ENST00000602898 ZNF575Q86XF7 245 aa3.51□□□□□ -1.85
SPTBN1-206ENST00000602898 RMI2Q96E14 147 aa3.51□□□□□ -1.85
SPTBN1-206ENST00000602898 CACNA1HO95180 2353 aa3.51□□□□□ -1.85
SPTBN1-206ENST00000602898 TRAV23DV6A0A075B6W5 121 aa3.5□□□□□ -1.85
SPTBN1-206ENST00000602898 IGHV4-34P06331 123 aa3.5□□□□□ -1.85
SPTBN1-206ENST00000602898 PROK1P58294 105 aa3.5□□□□□ -1.85
SPTBN1-206ENST00000602898 TSPEAR-AS2P59090 65 aa3.5□□□□□ -1.85
SPTBN1-206ENST00000602898 KRTAP1-3Q8IUG1 177 aa3.5□□□□□ -1.85
SPTBN1-206ENST00000602898 OCR1Q9BZK8 76 aa3.5□□□□□ -1.85
SPTBN1-206ENST00000602898 LINC00846Q9NV44 126 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms