RNA–Protein interactions for RNA: ENST00000602565.2

SGMS1-206, Transcript of sphingomyelin synthase 1, humanhuman

Gene SGMS1, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-206ENST00000602565 BOKQ9UMX3 212 aaPredicted RBP3.09□□□□□ -1.91
SGMS1-206ENST00000602565 MCM3APO60318 1980 aa3.09□□□□□ -1.92
SGMS1-206ENST00000602565 PSME4Q14997 1843 aa3.09□□□□□ -1.92
SGMS1-206ENST00000602565 EDC4Q6P2E9 1401 aaKnown RBP3.08□□□□□ -1.92
SGMS1-206ENST00000602565 TJP1Q07157 1748 aa3.08□□□□□ -1.92
SGMS1-206ENST00000602565 TRAV23DV6A0A075B6W5 121 aa3.08□□□□□ -1.92
SGMS1-206ENST00000602565 TRAV17A0A0B4J275 112 aa3.08□□□□□ -1.92
SGMS1-206ENST00000602565 IL7P13232 177 aa3.08□□□□□ -1.92
SGMS1-206ENST00000602565 PDE6GP18545 87 aa3.08□□□□□ -1.92
SGMS1-206ENST00000602565 CSAG1Q6PB30 78 aa3.08□□□□□ -1.92
SGMS1-206ENST00000602565 LYPD5Q6UWN5 251 aa3.08□□□□□ -1.92
SGMS1-206ENST00000602565 C4orf33Q8N1A6 199 aa3.08□□□□□ -1.92
SGMS1-206ENST00000602565 LIMD2Q9BT23 127 aa3.08□□□□□ -1.92
SGMS1-206ENST00000602565 FOCADQ5VW36 1801 aa3.08□□□□□ -1.92
SGMS1-206ENST00000602565 TRIOBPQ9H2D6 2365 aa3.08□□□□□ -1.92
SGMS1-206ENST00000602565 COL4A1P02462 1669 aa3.08□□□□□ -1.92
SGMS1-206ENST00000602565 ANKRD26Q9UPS8 1709 aa3.07□□□□□ -1.92
SGMS1-206ENST00000602565 IGKV2-29A2NJV5 120 aaPredicted RBP3.07□□□□□ -1.92
SGMS1-206ENST00000602565 GNGT1P63211 74 aa3.07□□□□□ -1.92
SGMS1-206ENST00000602565 OBSCN-AS1Q96MR7 158 aa3.07□□□□□ -1.92
SGMS1-206ENST00000602565 MRC1P22897 1456 aa3.07□□□□□ -1.92
SGMS1-206ENST00000602565 A0A0C4DFX4 3053 aa3.07□□□□□ -1.92
SGMS1-206ENST00000602565 CCDC179H3BU77 68 aa3.06□□□□□ -1.92
SGMS1-206ENST00000602565 IGLV3-1P01715 115 aa3.06□□□□□ -1.92
SGMS1-206ENST00000602565 PKIAP61925 76 aa3.06□□□□□ -1.92
SGMS1-206ENST00000602565 KRTAP5-7Q6L8G8 165 aa3.06□□□□□ -1.92
SGMS1-206ENST00000602565 MRPL36Q9P0J6 103 aaKnown RBP3.06□□□□□ -1.92
SGMS1-206ENST00000602565 GNG8Q9UK08 70 aa3.06□□□□□ -1.92
SGMS1-206ENST00000602565 UNC80Q8N2C7 3258 aa3.05□□□□□ -1.92
SGMS1-206ENST00000602565 NUPR2A6NF83 97 aa3.05□□□□□ -1.92
SGMS1-206ENST00000602565 IFNA17P01571 189 aa3.05□□□□□ -1.92
SGMS1-206ENST00000602565 TRAPPC2P0DI81 140 aa3.05□□□□□ -1.92
SGMS1-206ENST00000602565 TRAPPC2BP0DI82 140 aa3.05□□□□□ -1.92
SGMS1-206ENST00000602565 BTG2P78543 158 aa3.05□□□□□ -1.92
SGMS1-206ENST00000602565 OR2T2Q6IF00 324 aa3.05□□□□□ -1.92
SGMS1-206ENST00000602565 DMAC1Q96GE9 116 aa3.05□□□□□ -1.92
SGMS1-206ENST00000602565 RERGLQ9H628 205 aa3.05□□□□□ -1.92
SGMS1-206ENST00000602565 SCN7AQ01118 1682 aa3.05□□□□□ -1.92
SGMS1-206ENST00000602565 SPTBN5Q9NRC6 3674 aaKnown RBP3.04□□□□□ -1.92
SGMS1-206ENST00000602565 IGKCP01834 107 aa3.04□□□□□ -1.92
SGMS1-206ENST00000602565 AKAIN1P0CW23 69 aa3.04□□□□□ -1.92
SGMS1-206ENST00000602565 OCIAD2Q56VL3 154 aa3.04□□□□□ -1.92
SGMS1-206ENST00000602565 SPANXN1Q5VSR9 72 aa3.04□□□□□ -1.92
SGMS1-206ENST00000602565 C9orf62Q8N4C0 152 aa3.04□□□□□ -1.92
SGMS1-206ENST00000602565 ATG5Q9H1Y0 275 aa3.04□□□□□ -1.92
SGMS1-206ENST00000602565 SCP2D1Q9UJQ7 156 aa3.04□□□□□ -1.92
SGMS1-206ENST00000602565 FBN1P35555 2871 aaKnown RBP3.04□□□□□ -1.92
SGMS1-206ENST00000602565 KDM3BQ7LBC6 1761 aa3.03□□□□□ -1.92
SGMS1-206ENST00000602565 BRCA2P51587 3418 aa3.03□□□□□ -1.92
SGMS1-206ENST00000602565 KIAA0100Q14667 2235 aaKnown RBP3.03□□□□□ -1.92
SGMS1-206ENST00000602565 MRPS10P82664 201 aaKnown RBP3.03□□□□□ -1.92
SGMS1-206ENST00000602565 IL5P05113 134 aa3.02□□□□□ -1.93
SGMS1-206ENST00000602565 PIPP12273 146 aaPredicted RBP3.02□□□□□ -1.93
SGMS1-206ENST00000602565 ACBD7Q8N6N7 88 aa3.02□□□□□ -1.93
SGMS1-206ENST00000602565 C10orf105Q8TEF2 133 aa3.02□□□□□ -1.93
SGMS1-206ENST00000602565 C22orf24Q9Y442 160 aa3.02□□□□□ -1.93
SGMS1-206ENST00000602565 HTTP42858 3142 aa3.02□□□□□ -1.93
SGMS1-206ENST00000602565 VCANP13611 3396 aa3.02□□□□□ -1.93
SGMS1-206ENST00000602565 TRBV10-1A0A0K0K1A3 114 aa3.01□□□□□ -1.93
SGMS1-206ENST00000602565 M0R143 59 aa3.01□□□□□ -1.93
SGMS1-206ENST00000602565 PIRTP0C851 137 aa3.01□□□□□ -1.93
SGMS1-206ENST00000602565 HIST1H1DP16402 221 aaKnown RBP3.01□□□□□ -1.93
SGMS1-206ENST00000602565 PPP3R1P63098 170 aa3.01□□□□□ -1.93
SGMS1-206ENST00000602565 C6orf52Q5T4I8 152 aa3.01□□□□□ -1.93
SGMS1-206ENST00000602565 PP6455Q8WZ26 134 aa3.01□□□□□ -1.93
SGMS1-206ENST00000602565 SPTSSAQ969W0 71 aa3.01□□□□□ -1.93
SGMS1-206ENST00000602565 SEC11CQ9BY50 192 aa3.01□□□□□ -1.93
SGMS1-206ENST00000602565 AGPAT4-IT1Q9H0P7 198 aa3.01□□□□□ -1.93
SGMS1-206ENST00000602565 NAA60Q9H7X0 242 aa3.01□□□□□ -1.93
SGMS1-206ENST00000602565 TMEM242Q9NWH2 141 aa3.01□□□□□ -1.93
SGMS1-206ENST00000602565 MUC19Q7Z5P9 8384 aa3.01□□□□□ -1.93
SGMS1-206ENST00000602565 ZGRF1Q86YA3 2104 aa3.01□□□□□ -1.93
SGMS1-206ENST00000602565 LOC100130705A0A1B0GUX0 176 aa3□□□□□ -1.93
SGMS1-206ENST00000602565 F6UZH7 168 aa3□□□□□ -1.93
SGMS1-206ENST00000602565 IQCJQ1A5X6 159 aa3□□□□□ -1.93
SGMS1-206ENST00000602565 C8orf59Q8N0T1 100 aaPredicted RBP3□□□□□ -1.93
SGMS1-206ENST00000602565 SCN3BQ9NY72 215 aa3□□□□□ -1.93
SGMS1-206ENST00000602565 RANBP2P49792 3224 aaKnown RBP3□□□□□ -1.93
SGMS1-206ENST00000602565 LAMA3Q16787 3333 aa3□□□□□ -1.93
SGMS1-206ENST00000602565 CENPFP49454 3210 aa3□□□□□ -1.93
SGMS1-206ENST00000602565 MED13Q9UHV7 2174 aa3□□□□□ -1.93
SGMS1-206ENST00000602565 LAMB1P07942 1786 aa2.99□□□□□ -1.93
SGMS1-206ENST00000602565 C20orf202A1L168 122 aa2.99□□□□□ -1.93
SGMS1-206ENST00000602565 NDUFB6O95139 128 aa2.99□□□□□ -1.93
SGMS1-206ENST00000602565 SLC25A6P12236 298 aa2.99□□□□□ -1.93
SGMS1-206ENST00000602565 NDUFA11Q86Y39 141 aa2.99□□□□□ -1.93
SGMS1-206ENST00000602565 S100ZQ8WXG8 99 aa2.99□□□□□ -1.93
SGMS1-206ENST00000602565 NDUFA12Q9UI09 145 aa2.99□□□□□ -1.93
SGMS1-206ENST00000602565 SSC5DA1L4H1 1573 aa2.99□□□□□ -1.93
SGMS1-206ENST00000602565 CEP290O15078 2479 aa2.99□□□□□ -1.93
SGMS1-206ENST00000602565 CXorf51AA0A1B0GTR3 108 aa2.98□□□□□ -1.93
SGMS1-206ENST00000602565 CORTO00230 105 aa2.98□□□□□ -1.93
SGMS1-206ENST00000602565 SNCGO76070 127 aa2.98□□□□□ -1.93
SGMS1-206ENST00000602565 MRPL35Q9NZE8 188 aaKnown RBP2.98□□□□□ -1.93
SGMS1-206ENST00000602565 MUC3AQ02505 3323 aa2.98□□□□□ -1.93
SGMS1-206ENST00000602565 CACNA1AO00555 2505 aa2.98□□□□□ -1.93
SGMS1-206ENST00000602565 KIF20BQ96Q89 1820 aa2.98□□□□□ -1.93
SGMS1-206ENST00000602565 HIGD1CA8MV81 97 aa2.97□□□□□ -1.93
SGMS1-206ENST00000602565 PRB4P10163 310 aaPredicted RBP2.97□□□□□ -1.93
SGMS1-206ENST00000602565 Q5BKY6 102 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms