RNA–Protein interactions for RNA: ENST00000602029.1

VRK3-226, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 578 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-226ENST00000602029 ZNF25P17030 456 aaPredicted RBP3.62□□□□□ -1.83
VRK3-226ENST00000602029 CKS2P33552 79 aa3.62□□□□□ -1.83
VRK3-226ENST00000602029 FUSP35637 526 aaKnown RBP eCLIP3.62□□□□□ -1.83
VRK3-226ENST00000602029 KRTAP10-2P60368 255 aa3.62□□□□□ -1.83
VRK3-226ENST00000602029 MRPL51Q4U2R6 128 aaKnown RBP3.62□□□□□ -1.83
VRK3-226ENST00000602029 LCE2CQ5TA81 110 aa3.62□□□□□ -1.83
VRK3-226ENST00000602029 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.62□□□□□ -1.83
VRK3-226ENST00000602029 OR8A1Q8NGG7 326 aa3.62□□□□□ -1.83
VRK3-226ENST00000602029 MRAP2Q96G30 205 aa3.62□□□□□ -1.83
VRK3-226ENST00000602029 LINC00477Q96M19 166 aa3.62□□□□□ -1.83
VRK3-226ENST00000602029 CLUHP3Q96NS8 147 aa3.62□□□□□ -1.83
VRK3-226ENST00000602029 ODF3Q96PU9 254 aa3.62□□□□□ -1.83
VRK3-226ENST00000602029 COX11Q9Y6N1 276 aa3.62□□□□□ -1.83
VRK3-226ENST00000602029 A0A096LPF7 62 aa3.61□□□□□ -1.83
VRK3-226ENST00000602029 TRGV1A0A0A0MS02 117 aa3.61□□□□□ -1.83
VRK3-226ENST00000602029 C7orf71A4D174 169 aa3.61□□□□□ -1.83
VRK3-226ENST00000602029 A6NDN8 102 aa3.61□□□□□ -1.83
VRK3-226ENST00000602029 D6R8Y8 96 aa3.61□□□□□ -1.83
VRK3-226ENST00000602029 H3BTX0 84 aa3.61□□□□□ -1.83
VRK3-226ENST00000602029 IGHV3-53P01767 116 aa3.61□□□□□ -1.83
VRK3-226ENST00000602029 FCER1GP30273 86 aa3.61□□□□□ -1.83
VRK3-226ENST00000602029 CDKN1BP46527 198 aa3.61□□□□□ -1.83
VRK3-226ENST00000602029 LINC00315P59091 139 aa3.61□□□□□ -1.83
VRK3-226ENST00000602029 RPL32P62910 135 aaKnown RBP3.61□□□□□ -1.83
VRK3-226ENST00000602029 TWIST1Q15672 202 aa3.61□□□□□ -1.83
VRK3-226ENST00000602029 Q5VSD8 79 aa3.61□□□□□ -1.83
VRK3-226ENST00000602029 AMTNQ6UX39 209 aa3.61□□□□□ -1.83
VRK3-226ENST00000602029 AMN1Q8IY45 258 aa3.61□□□□□ -1.83
VRK3-226ENST00000602029 Q8N8P6 123 aa3.61□□□□□ -1.83
VRK3-226ENST00000602029 TMEM263Q8WUH6 116 aaKnown RBP3.61□□□□□ -1.83
VRK3-226ENST00000602029 IFI27L1Q96BM0 104 aa3.61□□□□□ -1.83
VRK3-226ENST00000602029 SGK494Q96LW2 274 aa3.61□□□□□ -1.83
VRK3-226ENST00000602029 C17orf77Q96MU5 243 aa3.61□□□□□ -1.83
VRK3-226ENST00000602029 C20orf78Q9BR46 151 aa3.61□□□□□ -1.83
VRK3-226ENST00000602029 HIGD1BQ9P298 99 aa3.61□□□□□ -1.83
VRK3-226ENST00000602029 IGKV2-40A0A087WW87 121 aaPredicted RBP3.6□□□□□ -1.83
VRK3-226ENST00000602029 A0A096LNJ9 63 aa3.6□□□□□ -1.83
VRK3-226ENST00000602029 TRAV8-2A0A0B4J237 113 aa3.6□□□□□ -1.83
VRK3-226ENST00000602029 TRAV12-1A0A0B4J245 112 aa3.6□□□□□ -1.83
VRK3-226ENST00000602029 TRAV12-3A0A0B4J271 114 aa3.6□□□□□ -1.83
VRK3-226ENST00000602029 TRAV21A0A0B4J279 112 aa3.6□□□□□ -1.83
VRK3-226ENST00000602029 FAM229AH3BQW9 127 aa3.6□□□□□ -1.83
VRK3-226ENST00000602029 PSCAO43653 123 aa3.6□□□□□ -1.83
VRK3-226ENST00000602029 NXPH4O95158 308 aa3.6□□□□□ -1.83
VRK3-226ENST00000602029 IGKV2D-40P01614 121 aaPredicted RBP3.6□□□□□ -1.83
VRK3-226ENST00000602029 ORM1P02763 201 aa3.6□□□□□ -1.83
VRK3-226ENST00000602029 SMR3BP02814 79 aaPredicted RBP3.6□□□□□ -1.83
VRK3-226ENST00000602029 PLNP26678 52 aa3.6□□□□□ -1.83
VRK3-226ENST00000602029 IFI27P40305 119 aaPredicted RBP3.6□□□□□ -1.83
VRK3-226ENST00000602029 LEPP41159 167 aa3.6□□□□□ -1.83
VRK3-226ENST00000602029 HSD52Q0P140 79 aa3.6□□□□□ -1.83
VRK3-226ENST00000602029 UBE2V1Q13404 147 aa3.6□□□□□ -1.83
VRK3-226ENST00000602029 ESRGQ1W209 222 aa3.6□□□□□ -1.83
VRK3-226ENST00000602029 ORMDL2Q53FV1 153 aa3.6□□□□□ -1.83
VRK3-226ENST00000602029 C8orf49Q96NF6 230 aa3.6□□□□□ -1.83
VRK3-226ENST00000602029 K7EP13 123 aa3.59□□□□□ -1.83
VRK3-226ENST00000602029 PAX4O43316 350 aa3.59□□□□□ -1.83
VRK3-226ENST00000602029 TNFRSF6BO95407 300 aa3.59□□□□□ -1.83
VRK3-226ENST00000602029 EVI2AP22794 236 aa3.59□□□□□ -1.83
VRK3-226ENST00000602029 HAMPP81172 84 aa3.59□□□□□ -1.83
VRK3-226ENST00000602029 ZNF415Q09FC8 603 aa3.59□□□□□ -1.83
VRK3-226ENST00000602029 TAL2Q16559 108 aa3.59□□□□□ -1.83
VRK3-226ENST00000602029 BVES-AS1Q5T3Y7 98 aa3.59□□□□□ -1.83
VRK3-226ENST00000602029 Q6ZTI0 123 aa3.59□□□□□ -1.83
VRK3-226ENST00000602029 NFE4Q86UQ8 179 aa3.59□□□□□ -1.83
VRK3-226ENST00000602029 STPG4Q8N801 248 aa3.59□□□□□ -1.83
VRK3-226ENST00000602029 FAM19A4Q96LR4 140 aa3.59□□□□□ -1.83
VRK3-226ENST00000602029 C18orf15Q96N68 181 aa3.59□□□□□ -1.83
VRK3-226ENST00000602029 VGLL1Q99990 258 aa3.59□□□□□ -1.83
VRK3-226ENST00000602029 TPPP3Q9BW30 176 aa3.59□□□□□ -1.83
VRK3-226ENST00000602029 KRTAP1-5Q9BYS1 174 aa3.59□□□□□ -1.83
VRK3-226ENST00000602029 MDFICQ9P1T7 246 aa3.59□□□□□ -1.83
VRK3-226ENST00000602029 CBY1Q9Y3M2 126 aa3.59□□□□□ -1.83
VRK3-226ENST00000602029 ICOSQ9Y6W8 199 aa3.59□□□□□ -1.83
VRK3-226ENST00000602029 PKHD1L1Q86WI1 4243 aa3.59□□□□□ -1.84
VRK3-226ENST00000602029 TRGV4A0A0C4DH28 118 aa3.58□□□□□ -1.84
VRK3-226ENST00000602029 PLAC8L1A1L4L8 177 aa3.58□□□□□ -1.84
VRK3-226ENST00000602029 DPM2O94777 84 aa3.58□□□□□ -1.84
VRK3-226ENST00000602029 NPYP01303 97 aa3.58□□□□□ -1.84
VRK3-226ENST00000602029 DNAH10OSP0CZ25 163 aa3.58□□□□□ -1.84
VRK3-226ENST00000602029 RNASE4P34096 147 aaKnown RBP3.58□□□□□ -1.84
VRK3-226ENST00000602029 HINT1P49773 126 aaPredicted RBP3.58□□□□□ -1.84
VRK3-226ENST00000602029 ZNF80P51504 273 aaPredicted RBP3.58□□□□□ -1.84
VRK3-226ENST00000602029 LAGE3Q14657 143 aa3.58□□□□□ -1.84
VRK3-226ENST00000602029 BATFQ16520 125 aa3.58□□□□□ -1.84
VRK3-226ENST00000602029 TMEM97Q5BJF2 176 aa3.58□□□□□ -1.84
VRK3-226ENST00000602029 PAPPA-AS1Q5QFB9 102 aa3.58□□□□□ -1.84
VRK3-226ENST00000602029 Q6ZSN1 163 aa3.58□□□□□ -1.84
VRK3-226ENST00000602029 ERASQ7Z444 233 aa3.58□□□□□ -1.84
VRK3-226ENST00000602029 ATOH7Q8N100 152 aa3.58□□□□□ -1.84
VRK3-226ENST00000602029 Q8TAT8 98 aa3.58□□□□□ -1.84
VRK3-226ENST00000602029 RNASE8Q8TDE3 154 aaKnown RBP3.58□□□□□ -1.84
VRK3-226ENST00000602029 RNF185Q96GF1 192 aa3.58□□□□□ -1.84
VRK3-226ENST00000602029 AP1S3Q96PC3 154 aa3.58□□□□□ -1.84
VRK3-226ENST00000602029 AGPAT4-IT1Q9H0P7 198 aa3.58□□□□□ -1.84
VRK3-226ENST00000602029 DPH3P1Q9H4G8 78 aa3.58□□□□□ -1.84
VRK3-226ENST00000602029 FAT3Q8TDW7 4589 aa3.58□□□□□ -1.84
VRK3-226ENST00000602029 IGLV5-52A0A0A0MRZ9 124 aa3.57□□□□□ -1.84
VRK3-226ENST00000602029 IGKV3D-20A0A0C4DH25 116 aa3.57□□□□□ -1.84
VRK3-226ENST00000602029 hDV102S1A0JD36 115 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms