RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 GNG4P50150 75 aa11.41□□□□□ -0.58
CHMP2A-208ENST00000601220 WDR73Q6P4I2 378 aa11.41□□□□□ -0.58
CHMP2A-208ENST00000601220 SPACA4Q8TDM5 124 aa11.41□□□□□ -0.58
CHMP2A-208ENST00000601220 DPH3P1Q9H4G8 78 aa11.41□□□□□ -0.58
CHMP2A-208ENST00000601220 A0A087WYN8 130 aa11.4□□□□□ -0.58
CHMP2A-208ENST00000601220 TRGC1P0CF51 173 aa11.4□□□□□ -0.58
CHMP2A-208ENST00000601220 C15orf56Q8N910 161 aa11.4□□□□□ -0.58
CHMP2A-208ENST00000601220 CNFNQ9BYD5 112 aa11.4□□□□□ -0.58
CHMP2A-208ENST00000601220 XKRY2A2RUG3 117 aa11.39□□□□□ -0.59
CHMP2A-208ENST00000601220 IFNA1P01562 189 aa11.39□□□□□ -0.59
CHMP2A-208ENST00000601220 CTRLP40313 264 aa11.39□□□□□ -0.59
CHMP2A-208ENST00000601220 MEF2BQ02080 365 aaPredicted RBP11.39□□□□□ -0.59
CHMP2A-208ENST00000601220 NUDT10Q8NFP7 164 aa11.39□□□□□ -0.59
CHMP2A-208ENST00000601220 NUDT11Q96G61 164 aa11.39□□□□□ -0.59
CHMP2A-208ENST00000601220 RNF185Q96GF1 192 aa11.39□□□□□ -0.59
CHMP2A-208ENST00000601220 PDE6DO43924 150 aa11.38□□□□□ -0.59
CHMP2A-208ENST00000601220 GATD1Q8NB37 220 aa11.38□□□□□ -0.59
CHMP2A-208ENST00000601220 AP5S1Q9NUS5 200 aa11.38□□□□□ -0.59
CHMP2A-208ENST00000601220 PLAC8Q9NZF1 115 aa11.38□□□□□ -0.59
CHMP2A-208ENST00000601220 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.37□□□□□ -0.59
CHMP2A-208ENST00000601220 AMTP48728 403 aa11.37□□□□□ -0.59
CHMP2A-208ENST00000601220 SULT1A2P50226 295 aa11.37□□□□□ -0.59
CHMP2A-208ENST00000601220 COTL1Q14019 142 aa11.37□□□□□ -0.59
CHMP2A-208ENST00000601220 MED9Q9NWA0 146 aa11.37□□□□□ -0.59
CHMP2A-208ENST00000601220 GAGE12HA6NDE8 117 aa11.36□□□□□ -0.59
CHMP2A-208ENST00000601220 UBE2L6O14933 153 aa11.35□□□□□ -0.59
CHMP2A-208ENST00000601220 DPH3Q96FX2 82 aa11.35□□□□□ -0.59
CHMP2A-208ENST00000601220 BIN3Q9NQY0 253 aa11.35□□□□□ -0.59
CHMP2A-208ENST00000601220 TRAV26-2A0A0B4J265 109 aa11.34□□□□□ -0.59
CHMP2A-208ENST00000601220 BCL2P10415 239 aa11.34□□□□□ -0.59
CHMP2A-208ENST00000601220 TWIST1Q15672 202 aa11.34□□□□□ -0.59
CHMP2A-208ENST00000601220 Q6ZNX1 250 aa11.34□□□□□ -0.59
CHMP2A-208ENST00000601220 TEX46H3BTG2 121 aa11.33□□□□□ -0.6
CHMP2A-208ENST00000601220 K7EN84 100 aa11.33□□□□□ -0.6
CHMP2A-208ENST00000601220 FOXA3P55318 350 aaPredicted RBP11.33□□□□□ -0.6
CHMP2A-208ENST00000601220 COX6A2Q02221 97 aa11.33□□□□□ -0.6
CHMP2A-208ENST00000601220 EIF5AL1Q6IS14 154 aaKnown RBP11.33□□□□□ -0.6
CHMP2A-208ENST00000601220 CFAP161Q6P656 301 aa11.33□□□□□ -0.6
CHMP2A-208ENST00000601220 RPL39LQ96EH5 51 aaKnown RBP11.33□□□□□ -0.6
CHMP2A-208ENST00000601220 RNASE7Q9H1E1 156 aaKnown RBP11.33□□□□□ -0.6
CHMP2A-208ENST00000601220 PHOX2AO14813 284 aa11.32□□□□□ -0.6
CHMP2A-208ENST00000601220 RPS10P46783 165 aaKnown RBP11.32□□□□□ -0.6
CHMP2A-208ENST00000601220 PRSS3P2Q8NHM4 247 aa11.32□□□□□ -0.6
CHMP2A-208ENST00000601220 OCC1Q8TAD7 63 aa11.32□□□□□ -0.6
CHMP2A-208ENST00000601220 GTSF1Q8WW33 167 aa11.32□□□□□ -0.6
CHMP2A-208ENST00000601220 CHCHD10Q8WYQ3 142 aaPredicted RBP11.32□□□□□ -0.6
CHMP2A-208ENST00000601220 RPP21Q9H633 154 aaKnown RBP11.32□□□□□ -0.6
CHMP2A-208ENST00000601220 IGKV3OR2-268A0A0C4DH90 116 aa11.31□□□□□ -0.6
CHMP2A-208ENST00000601220 HIGD2BQ4VC39 106 aa11.31□□□□□ -0.6
CHMP2A-208ENST00000601220 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.3□□□□□ -0.6
CHMP2A-208ENST00000601220 GVQW2A0A096LPI5 108 aaPredicted RBP11.3□□□□□ -0.6
CHMP2A-208ENST00000601220 IGKV2-29A2NJV5 120 aaPredicted RBP11.3□□□□□ -0.6
CHMP2A-208ENST00000601220 H7C423 109 aa11.3□□□□□ -0.6
CHMP2A-208ENST00000601220 NDUFS6O75380 124 aaKnown RBP11.3□□□□□ -0.6
CHMP2A-208ENST00000601220 NCR2O95944 276 aa11.3□□□□□ -0.6
CHMP2A-208ENST00000601220 FAM231BA6NCW3 169 aa11.29□□□□□ -0.6
CHMP2A-208ENST00000601220 FOXI1Q12951 378 aa11.29□□□□□ -0.6
CHMP2A-208ENST00000601220 FGF6P10767 208 aa11.28□□□□□ -0.6
CHMP2A-208ENST00000601220 LRP2P98164 4655 aa11.27□□□□□ -0.6
CHMP2A-208ENST00000601220 SDHAF1A6NFY7 115 aa11.27□□□□□ -0.61
CHMP2A-208ENST00000601220 MAJINQ3KP22 176 aa11.27□□□□□ -0.61
CHMP2A-208ENST00000601220 AMMECR1LQ6DCA0 310 aa11.27□□□□□ -0.61
CHMP2A-208ENST00000601220 C7orf33Q8WU49 177 aa11.27□□□□□ -0.61
CHMP2A-208ENST00000601220 IGKV2-24A0A0C4DH68 120 aa11.26□□□□□ -0.61
CHMP2A-208ENST00000601220 GAS8-AS1O95177 125 aa11.26□□□□□ -0.61
CHMP2A-208ENST00000601220 APCSP02743 223 aa11.26□□□□□ -0.61
CHMP2A-208ENST00000601220 TAGLN2P37802 199 aaKnown RBP11.26□□□□□ -0.61
CHMP2A-208ENST00000601220 PRR3P79522 188 aaKnown RBP11.26□□□□□ -0.61
CHMP2A-208ENST00000601220 RNASEKQ6P5S7 137 aaKnown RBP11.26□□□□□ -0.61
CHMP2A-208ENST00000601220 SLC51BQ86UW2 128 aa11.26□□□□□ -0.61
CHMP2A-208ENST00000601220 LINC01600Q96MT4 127 aa11.26□□□□□ -0.61
CHMP2A-208ENST00000601220 A0A096LNI7 61 aa11.25□□□□□ -0.61
CHMP2A-208ENST00000601220 TRBV6-5A0A0K0K1A5 114 aa11.25□□□□□ -0.61
CHMP2A-208ENST00000601220 ESDP10768 282 aa11.25□□□□□ -0.61
CHMP2A-208ENST00000601220 TEX261Q6UWH6 196 aa11.25□□□□□ -0.61
CHMP2A-208ENST00000601220 TCTE3Q8IZS6 198 aa11.25□□□□□ -0.61
CHMP2A-208ENST00000601220 STPG4Q8N801 248 aa11.25□□□□□ -0.61
CHMP2A-208ENST00000601220 OR5A1Q8NGJ0 315 aa11.25□□□□□ -0.61
CHMP2A-208ENST00000601220 LINC00959A0A1B0GUT2 108 aa11.23□□□□□ -0.61
CHMP2A-208ENST00000601220 I3L3M4 83 aa11.23□□□□□ -0.61
CHMP2A-208ENST00000601220 ZNF25P17030 456 aaPredicted RBP11.23□□□□□ -0.61
CHMP2A-208ENST00000601220 FAM231DQ6ZW35 169 aa11.23□□□□□ -0.61
CHMP2A-208ENST00000601220 TSHBP01222 138 aa11.22□□□□□ -0.61
CHMP2A-208ENST00000601220 XCL1P47992 114 aa11.22□□□□□ -0.61
CHMP2A-208ENST00000601220 SMIM15Q7Z3B0 74 aa11.22□□□□□ -0.61
CHMP2A-208ENST00000601220 LYPD6BQ8NI32 183 aa11.22□□□□□ -0.61
CHMP2A-208ENST00000601220 GATCO43716 136 aaKnown RBP11.21□□□□□ -0.61
CHMP2A-208ENST00000601220 PMCHP20382 165 aa11.21□□□□□ -0.61
CHMP2A-208ENST00000601220 ODF1Q14990 250 aa11.21□□□□□ -0.61
CHMP2A-208ENST00000601220 LINC00526Q96FQ7 95 aa11.21□□□□□ -0.61
CHMP2A-208ENST00000601220 A8MWL6 223 aa11.2□□□□□ -0.62
CHMP2A-208ENST00000601220 TMEM250H0YL14 139 aa11.2□□□□□ -0.62
CHMP2A-208ENST00000601220 CCL25O15444 150 aa11.2□□□□□ -0.62
CHMP2A-208ENST00000601220 POLR2KP53803 58 aaKnown RBP11.2□□□□□ -0.62
CHMP2A-208ENST00000601220 CDC42SE2Q9NRR3 84 aa11.2□□□□□ -0.62
CHMP2A-208ENST00000601220 IGHV1-58A0A0C4DH39 117 aa11.19□□□□□ -0.62
CHMP2A-208ENST00000601220 KRTAP10-8P60410 259 aa11.19□□□□□ -0.62
CHMP2A-208ENST00000601220 SRSF9Q13242 221 aaKnown RBP eCLIP11.19□□□□□ -0.62
CHMP2A-208ENST00000601220 CT83Q5H943 113 aa11.19□□□□□ -0.62
CHMP2A-208ENST00000601220 TMEM242Q9NWH2 141 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms