RNA–Protein interactions for RNA: ENST00000600841.1

NOTCH3-205, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-205ENST00000600841 LINC00269Q8N2A0 174 aa11.06□□□□□ -0.64
NOTCH3-205ENST00000600841 TSKUQ8WUA8 353 aa11.06□□□□□ -0.64
NOTCH3-205ENST00000600841 OSTCQ9NRP0 149 aa11.06□□□□□ -0.64
NOTCH3-205ENST00000600841 PRR34Q9NV39 138 aa11.06□□□□□ -0.64
NOTCH3-205ENST00000600841 C14orf177Q52M58 125 aa11.05□□□□□ -0.64
NOTCH3-205ENST00000600841 GFRA4Q9GZZ7 299 aa11.05□□□□□ -0.64
NOTCH3-205ENST00000600841 HIGD1CA8MV81 97 aa11.04□□□□□ -0.64
NOTCH3-205ENST00000600841 UBE2L6O14933 153 aa11.04□□□□□ -0.64
NOTCH3-205ENST00000600841 AMTP48728 403 aa11.04□□□□□ -0.64
NOTCH3-205ENST00000600841 HAMPP81172 84 aa11.04□□□□□ -0.64
NOTCH3-205ENST00000600841 IFITM2Q01629 132 aa11.04□□□□□ -0.64
NOTCH3-205ENST00000600841 CLLU1Q5K131 121 aa11.04□□□□□ -0.64
NOTCH3-205ENST00000600841 DEFB104AQ8WTQ1 72 aa11.04□□□□□ -0.64
NOTCH3-205ENST00000600841 RPL39LQ96EH5 51 aaKnown RBP11.04□□□□□ -0.64
NOTCH3-205ENST00000600841 A0A1B0GUT8 65 aa11.03□□□□□ -0.64
NOTCH3-205ENST00000600841 A0A1B0GUV1 79 aa11.03□□□□□ -0.64
NOTCH3-205ENST00000600841 FAM231BA6NCW3 169 aa11.03□□□□□ -0.64
NOTCH3-205ENST00000600841 HLA-DQA1P01909 254 aa11.03□□□□□ -0.64
NOTCH3-205ENST00000600841 FAM30AQ9NZY2 134 aa11.03□□□□□ -0.64
NOTCH3-205ENST00000600841 NAT8Q9UHE5 227 aa11.03□□□□□ -0.64
NOTCH3-205ENST00000600841 VPS13BQ7Z7G8 4022 aa11.02□□□□□ -0.64
NOTCH3-205ENST00000600841 SMR3BP02814 79 aaPredicted RBP11.02□□□□□ -0.65
NOTCH3-205ENST00000600841 REG3AQ06141 175 aa11.02□□□□□ -0.65
NOTCH3-205ENST00000600841 ADIRFQ15847 76 aa11.02□□□□□ -0.65
NOTCH3-205ENST00000600841 Q5VSD8 79 aa11.02□□□□□ -0.65
NOTCH3-205ENST00000600841 C20orf203Q8NBC4 194 aa11.02□□□□□ -0.65
NOTCH3-205ENST00000600841 ISOC2Q96AB3 205 aa11.02□□□□□ -0.65
NOTCH3-205ENST00000600841 USP17L23D6RBM5 183 aa11.01□□□□□ -0.65
NOTCH3-205ENST00000600841 RPL23P62829 140 aaKnown RBP11.01□□□□□ -0.65
NOTCH3-205ENST00000600841 LINC01620Q4KN68 170 aa11.01□□□□□ -0.65
NOTCH3-205ENST00000600841 V9GYV3 84 aa11.01□□□□□ -0.65
NOTCH3-205ENST00000600841 IGLV4-60A0A075B6I1 120 aa11□□□□□ -0.65
NOTCH3-205ENST00000600841 NCR2O95944 276 aa11□□□□□ -0.65
NOTCH3-205ENST00000600841 Q6ZSA8 131 aa11□□□□□ -0.65
NOTCH3-205ENST00000600841 TMEM191AQ9H0A3 160 aa11□□□□□ -0.65
NOTCH3-205ENST00000600841 TRAV8-4A0A0B4J246 113 aa10.99□□□□□ -0.65
NOTCH3-205ENST00000600841 SDHAF1A6NFY7 115 aa10.99□□□□□ -0.65
NOTCH3-205ENST00000600841 FAM229AH3BQW9 127 aa10.99□□□□□ -0.65
NOTCH3-205ENST00000600841 RIGQ13278 110 aa10.99□□□□□ -0.65
NOTCH3-205ENST00000600841 KRTAP26-1Q6PEX3 210 aa10.99□□□□□ -0.65
NOTCH3-205ENST00000600841 IGLV10-54A0A075B6I4 117 aa10.98□□□□□ -0.65
NOTCH3-205ENST00000600841 APCSP02743 223 aa10.98□□□□□ -0.65
NOTCH3-205ENST00000600841 NUP35Q8NFH5 326 aa10.98□□□□□ -0.65
NOTCH3-205ENST00000600841 TRBV6-5A0A0K0K1A5 114 aa10.97□□□□□ -0.65
NOTCH3-205ENST00000600841 I3L3M4 83 aa10.97□□□□□ -0.65
NOTCH3-205ENST00000600841 PMCHP20382 165 aa10.97□□□□□ -0.65
NOTCH3-205ENST00000600841 ST20Q9HBF5 79 aa10.97□□□□□ -0.65
NOTCH3-205ENST00000600841 NAT8BQ9UHF3 227 aa10.97□□□□□ -0.65
NOTCH3-205ENST00000600841 RAB4AP20338 218 aa10.96□□□□□ -0.65
NOTCH3-205ENST00000600841 AMMECR1LQ6DCA0 310 aa10.96□□□□□ -0.65
NOTCH3-205ENST00000600841 MRAP2Q96G30 205 aa10.96□□□□□ -0.65
NOTCH3-205ENST00000600841 RNF185Q96GF1 192 aa10.96□□□□□ -0.65
NOTCH3-205ENST00000600841 SRRM2Q9UQ35 2752 aaKnown RBP10.96□□□□□ -0.66
NOTCH3-205ENST00000600841 H7C423 109 aa10.95□□□□□ -0.66
NOTCH3-205ENST00000600841 GAS8-AS1O95177 125 aa10.95□□□□□ -0.66
NOTCH3-205ENST00000600841 PRSS1P07477 247 aa10.95□□□□□ -0.66
NOTCH3-205ENST00000600841 INAFM2P0DMQ5 153 aa10.95□□□□□ -0.66
NOTCH3-205ENST00000600841 AMN1Q8IY45 258 aa10.95□□□□□ -0.66
NOTCH3-205ENST00000600841 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.94□□□□□ -0.66
NOTCH3-205ENST00000600841 IGKV2-29A2NJV5 120 aaPredicted RBP10.94□□□□□ -0.66
NOTCH3-205ENST00000600841 DGAT2L7PQ6IED9 249 aa10.94□□□□□ -0.66
NOTCH3-205ENST00000600841 RNASEKQ6P5S7 137 aaKnown RBP10.94□□□□□ -0.66
NOTCH3-205ENST00000600841 CLRN3Q8NCR9 226 aa10.94□□□□□ -0.66
NOTCH3-205ENST00000600841 SMIM27A0A1W2PRY6 76 aa10.93□□□□□ -0.66
NOTCH3-205ENST00000600841 FGF6P10767 208 aa10.93□□□□□ -0.66
NOTCH3-205ENST00000600841 RPS10P46783 165 aaKnown RBP10.93□□□□□ -0.66
NOTCH3-205ENST00000600841 IGKV3OR2-268A0A0C4DH90 116 aa10.92□□□□□ -0.66
NOTCH3-205ENST00000600841 TSHBP01222 138 aa10.92□□□□□ -0.66
NOTCH3-205ENST00000600841 UQCC3Q6UW78 93 aa10.92□□□□□ -0.66
NOTCH3-205ENST00000600841 SCXQ7RTU7 201 aa10.92□□□□□ -0.66
NOTCH3-205ENST00000600841 CHAC1Q9BUX1 264 aa10.92□□□□□ -0.66
NOTCH3-205ENST00000600841 TMEM242Q9NWH2 141 aa10.92□□□□□ -0.66
NOTCH3-205ENST00000600841 TRBV27A0A0K0K1C4 114 aa10.91□□□□□ -0.66
NOTCH3-205ENST00000600841 PPP1R17O96001 155 aa10.91□□□□□ -0.66
NOTCH3-205ENST00000600841 ZNF25P17030 456 aaPredicted RBP10.91□□□□□ -0.66
NOTCH3-205ENST00000600841 POLR2KP53803 58 aaKnown RBP10.91□□□□□ -0.66
NOTCH3-205ENST00000600841 COMMD7Q86VX2 200 aa10.91□□□□□ -0.66
NOTCH3-205ENST00000600841 A0A1B0GW15 77 aa10.9□□□□□ -0.66
NOTCH3-205ENST00000600841 hDV102S1A0JD36 115 aa10.9□□□□□ -0.66
NOTCH3-205ENST00000600841 SMKR1H3BMG3 65 aa10.9□□□□□ -0.66
NOTCH3-205ENST00000600841 ESDP10768 282 aa10.9□□□□□ -0.66
NOTCH3-205ENST00000600841 CAMPP49913 170 aa10.9□□□□□ -0.66
NOTCH3-205ENST00000600841 TMEM101Q96IK0 257 aa10.9□□□□□ -0.66
NOTCH3-205ENST00000600841 BTF3L4Q96K17 158 aa10.9□□□□□ -0.66
NOTCH3-205ENST00000600841 GAGE12HA6NDE8 117 aa10.89□□□□□ -0.67
NOTCH3-205ENST00000600841 PNRC1Q12796 327 aaPredicted RBP10.89□□□□□ -0.67
NOTCH3-205ENST00000600841 FAM104BQ5XKR9 115 aa10.89□□□□□ -0.67
NOTCH3-205ENST00000600841 LINC00528Q8N1L1 170 aa10.89□□□□□ -0.67
NOTCH3-205ENST00000600841 C9orf163Q8N9P6 203 aa10.89□□□□□ -0.67
NOTCH3-205ENST00000600841 FLG2Q5D862 2391 aaPredicted RBP10.88□□□□□ -0.67
NOTCH3-205ENST00000600841 F8W036 122 aa10.88□□□□□ -0.67
NOTCH3-205ENST00000600841 VCYO14598 125 aa10.88□□□□□ -0.67
NOTCH3-205ENST00000600841 PPP1R2P9O14990 202 aa10.88□□□□□ -0.67
NOTCH3-205ENST00000600841 PLA2G1BP04054 148 aaKnown RBP10.88□□□□□ -0.67
NOTCH3-205ENST00000600841 NRACQ8N912 160 aa10.88□□□□□ -0.67
NOTCH3-205ENST00000600841 OR5A1Q8NGJ0 315 aa10.88□□□□□ -0.67
NOTCH3-205ENST00000600841 CIRBP-AS1Q8TBR5 109 aa10.88□□□□□ -0.67
NOTCH3-205ENST00000600841 AP5S1Q9NUS5 200 aa10.88□□□□□ -0.67
NOTCH3-205ENST00000600841 TMEM218A2RU14 115 aa10.87□□□□□ -0.67
NOTCH3-205ENST00000600841 C7orf77A4D0Y5 90 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms