RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 RHOHQ15669 191 aa10.8□□□□□ -0.68
HIF3A-218ENST00000600383 MRPL35Q9NZE8 188 aaKnown RBP10.8□□□□□ -0.68
HIF3A-218ENST00000600383 TRBV7-3A0A075B6L6 115 aa10.79□□□□□ -0.68
HIF3A-218ENST00000600383 G3V4G9 280 aa10.79□□□□□ -0.68
HIF3A-218ENST00000600383 BAALCQ8WXS3 180 aa10.79□□□□□ -0.68
HIF3A-218ENST00000600383 A0A087WX48 190 aa10.79□□□□□ -0.68
HIF3A-218ENST00000600383 IGIPA6NJ69 53 aa10.79□□□□□ -0.68
HIF3A-218ENST00000600383 C20orf203Q8NBC4 194 aa10.79□□□□□ -0.68
HIF3A-218ENST00000600383 GAGE12JA6NER3 117 aa10.78□□□□□ -0.68
HIF3A-218ENST00000600383 IGKCP01834 107 aa10.78□□□□□ -0.68
HIF3A-218ENST00000600383 RPL36AP83881 106 aaKnown RBP10.78□□□□□ -0.68
HIF3A-218ENST00000600383 GAGE4Q13068 117 aa10.78□□□□□ -0.68
HIF3A-218ENST00000600383 GAGE5Q13069 117 aa10.78□□□□□ -0.68
HIF3A-218ENST00000600383 GAGE13Q4V321 117 aa10.78□□□□□ -0.68
HIF3A-218ENST00000600383 ZC2HC1BQ5TFG8 222 aa10.78□□□□□ -0.68
HIF3A-218ENST00000600383 RPL36ALQ969Q0 106 aaKnown RBP10.78□□□□□ -0.68
HIF3A-218ENST00000600383 OPRPNQ99935 248 aaPredicted RBP10.78□□□□□ -0.68
HIF3A-218ENST00000600383 ZMAT4Q9H898 229 aa10.78□□□□□ -0.68
HIF3A-218ENST00000600383 UQCR10Q9UDW1 63 aa10.78□□□□□ -0.68
HIF3A-218ENST00000600383 DPM2O94777 84 aa10.78□□□□□ -0.68
HIF3A-218ENST00000600383 EGFEM1PQ0D2K5 195 aa10.78□□□□□ -0.68
HIF3A-218ENST00000600383 FAM222AQ5U5X8 452 aa10.78□□□□□ -0.68
HIF3A-218ENST00000600383 CHTOPQ9Y3Y2 248 aaKnown RBP10.78□□□□□ -0.68
HIF3A-218ENST00000600383 IGHV4-28A0A0C4DH34 117 aa10.77□□□□□ -0.69
HIF3A-218ENST00000600383 PRSS29PA6NIE9 313 aa10.77□□□□□ -0.69
HIF3A-218ENST00000600383 LINC01549A6NIU2 74 aa10.77□□□□□ -0.69
HIF3A-218ENST00000600383 COTL1Q14019 142 aa10.77□□□□□ -0.69
HIF3A-218ENST00000600383 TP73-AS1Q9UF72 201 aa10.77□□□□□ -0.69
HIF3A-218ENST00000600383 LOC100131303A0A0U1RQF7 123 aa10.76□□□□□ -0.69
HIF3A-218ENST00000600383 FHL2Q14192 279 aa10.76□□□□□ -0.69
HIF3A-218ENST00000600383 ANKRD39Q53RE8 183 aa10.76□□□□□ -0.69
HIF3A-218ENST00000600383 TRAV12-1A0A0B4J245 112 aa10.76□□□□□ -0.69
HIF3A-218ENST00000600383 TRBV10-1A0A0K0K1A3 114 aa10.76□□□□□ -0.69
HIF3A-218ENST00000600383 TMEM141Q96I45 108 aa10.76□□□□□ -0.69
HIF3A-218ENST00000600383 HHLA3Q9XRX5 114 aa10.76□□□□□ -0.69
HIF3A-218ENST00000600383 RNF183Q96D59 192 aa10.75□□□□□ -0.69
HIF3A-218ENST00000600383 TIMM17AQ99595 171 aa10.75□□□□□ -0.69
HIF3A-218ENST00000600383 NOTCH1P46531 2555 aa10.75□□□□□ -0.69
HIF3A-218ENST00000600383 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.75□□□□□ -0.69
HIF3A-218ENST00000600383 TRBV6-4A0A1B0GX49 114 aa10.75□□□□□ -0.69
HIF3A-218ENST00000600383 IGKV2-29A2NJV5 120 aaPredicted RBP10.75□□□□□ -0.69
HIF3A-218ENST00000600383 F8VRH5 84 aa10.75□□□□□ -0.69
HIF3A-218ENST00000600383 CIDEAO60543 219 aa10.75□□□□□ -0.69
HIF3A-218ENST00000600383 CEMP1Q6PRD7 247 aaPredicted RBP10.75□□□□□ -0.69
HIF3A-218ENST00000600383 PMVKQ15126 192 aa10.74□□□□□ -0.69
HIF3A-218ENST00000600383 CHCHD7Q9BUK0 85 aa10.74□□□□□ -0.69
HIF3A-218ENST00000600383 NMUP48645 174 aa10.73□□□□□ -0.69
HIF3A-218ENST00000600383 HNRNPA3P51991 378 aaKnown RBP10.73□□□□□ -0.69
HIF3A-218ENST00000600383 NPSP0C0P6 89 aa10.73□□□□□ -0.69
HIF3A-218ENST00000600383 MIFP14174 115 aa10.73□□□□□ -0.69
HIF3A-218ENST00000600383 PLNP26678 52 aa10.73□□□□□ -0.69
HIF3A-218ENST00000600383 UBE2D3P61077 147 aa10.73□□□□□ -0.69
HIF3A-218ENST00000600383 UBE2D2P62837 147 aa10.73□□□□□ -0.69
HIF3A-218ENST00000600383 LINC00612Q8N6U2 182 aa10.73□□□□□ -0.69
HIF3A-218ENST00000600383 PRADC1Q9BSG0 188 aa10.73□□□□□ -0.69
HIF3A-218ENST00000600383 CST9LQ9H4G1 147 aa10.73□□□□□ -0.69
HIF3A-218ENST00000600383 LYRM9A8MSI8 78 aa10.72□□□□□ -0.69
HIF3A-218ENST00000600383 SLC25A34Q6PIV7 304 aa10.72□□□□□ -0.69
HIF3A-218ENST00000600383 DAZ4Q86SG3 579 aaKnown RBP10.72□□□□□ -0.69
HIF3A-218ENST00000600383 Q8NAQ8 132 aa10.72□□□□□ -0.69
HIF3A-218ENST00000600383 DAZ3Q9NR90 486 aaKnown RBP10.72□□□□□ -0.69
HIF3A-218ENST00000600383 PRB2P02812 416 aaPredicted RBP10.72□□□□□ -0.69
HIF3A-218ENST00000600383 MDFIQ99750 246 aa10.72□□□□□ -0.69
HIF3A-218ENST00000600383 RNASE13Q5GAN3 156 aaKnown RBP10.71□□□□□ -0.69
HIF3A-218ENST00000600383 COL5A1-AS1Q5SY13 56 aa10.71□□□□□ -0.69
HIF3A-218ENST00000600383 VCX2Q9H322 139 aa10.71□□□□□ -0.69
HIF3A-218ENST00000600383 CMYA5Q8N3K9 4069 aa10.71□□□□□ -0.7
HIF3A-218ENST00000600383 DAD1P61803 113 aa10.7□□□□□ -0.7
HIF3A-218ENST00000600383 RETNQ9HD89 108 aa10.7□□□□□ -0.7
HIF3A-218ENST00000600383 CELA1Q9UNI1 258 aa10.7□□□□□ -0.7
HIF3A-218ENST00000600383 IGLV4-3A0A075B6K6 122 aa10.7□□□□□ -0.7
HIF3A-218ENST00000600383 COX8AP10176 69 aa10.7□□□□□ -0.7
HIF3A-218ENST00000600383 NTM-AS1Q6ZSK4 140 aa10.7□□□□□ -0.7
HIF3A-218ENST00000600383 IGKV2D-26A0A0A0MRZ7 120 aa10.69□□□□□ -0.7
HIF3A-218ENST00000600383 SAMD5Q5TGI4 173 aa10.69□□□□□ -0.7
HIF3A-218ENST00000600383 UBE2D4Q9Y2X8 147 aa10.69□□□□□ -0.7
HIF3A-218ENST00000600383 PCP2Q8IVA1 136 aa10.69□□□□□ -0.7
HIF3A-218ENST00000600383 PYGO1Q9Y3Y4 419 aa10.69□□□□□ -0.7
HIF3A-218ENST00000600383 ANK2Q01484 3957 aa10.68□□□□□ -0.7
HIF3A-218ENST00000600383 IGLV4-69A0A075B6H9 119 aa10.68□□□□□ -0.7
HIF3A-218ENST00000600383 A8MZ25 164 aa10.68□□□□□ -0.7
HIF3A-218ENST00000600383 SPART-AS1P0CW21 52 aa10.68□□□□□ -0.7
HIF3A-218ENST00000600383 BATFQ16520 125 aa10.68□□□□□ -0.7
HIF3A-218ENST00000600383 DGAT2L7PQ6IED9 249 aa10.68□□□□□ -0.7
HIF3A-218ENST00000600383 C11orf86A6NJI1 115 aa10.67□□□□□ -0.7
HIF3A-218ENST00000600383 GYPEP15421 78 aa10.67□□□□□ -0.7
HIF3A-218ENST00000600383 CRYBA4P53673 196 aa10.67□□□□□ -0.7
HIF3A-218ENST00000600383 PAPPA-AS1Q5QFB9 102 aa10.67□□□□□ -0.7
HIF3A-218ENST00000600383 TTTY13Q9BZ97 58 aa10.67□□□□□ -0.7
HIF3A-218ENST00000600383 PRO0255Q9UI72 69 aa10.67□□□□□ -0.7
HIF3A-218ENST00000600383 CBY1Q9Y3M2 126 aa10.67□□□□□ -0.7
HIF3A-218ENST00000600383 LINC00694P0DN24 101 aa10.67□□□□□ -0.7
HIF3A-218ENST00000600383 FAM104AQ969W3 186 aa10.67□□□□□ -0.7
HIF3A-218ENST00000600383 NBEAL1Q6ZS30 2694 aa10.66□□□□□ -0.7
HIF3A-218ENST00000600383 A0A0J9YY99 117 aa10.66□□□□□ -0.7
HIF3A-218ENST00000600383 HTN3P15516 51 aa10.66□□□□□ -0.7
HIF3A-218ENST00000600383 SPANXA1Q9NS26 97 aa10.66□□□□□ -0.7
HIF3A-218ENST00000600383 A0A096LPF7 62 aa10.66□□□□□ -0.7
HIF3A-218ENST00000600383 TRAV8-6A0A0B4J262 113 aa10.66□□□□□ -0.7
HIF3A-218ENST00000600383 TMEM170BQ5T4T1 132 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 246.1 ms