RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 KIF25-AS1Q9Y6Z4 181 aa7.22□□□□□ -1.25
NFKB1-212ENST00000600343 CNOT1A5YKK6 2376 aaKnown RBP7.22□□□□□ -1.25
NFKB1-212ENST00000600343 LY6G5BQ8NDX9 201 aa7.22□□□□□ -1.25
NFKB1-212ENST00000600343 IGLV1-44P01699 117 aa7.21□□□□□ -1.25
NFKB1-212ENST00000600343 MED14OSP0DP75 135 aa7.21□□□□□ -1.25
NFKB1-212ENST00000600343 CFAP47Q6ZTR5 3102 aa7.21□□□□□ -1.25
NFKB1-212ENST00000600343 FRYLO94915 3013 aa7.21□□□□□ -1.26
NFKB1-212ENST00000600343 ZNF561-AS1K7EIQ3 104 aa7.21□□□□□ -1.26
NFKB1-212ENST00000600343 PRB3Q04118 309 aaPredicted RBP7.21□□□□□ -1.26
NFKB1-212ENST00000600343 SPTBN2O15020 2390 aa7.21□□□□□ -1.26
NFKB1-212ENST00000600343 MED13Q9UHV7 2174 aa7.21□□□□□ -1.26
NFKB1-212ENST00000600343 NCR3O14931 201 aa7.21□□□□□ -1.26
NFKB1-212ENST00000600343 ATP5EP56381 51 aaPredicted RBP7.21□□□□□ -1.26
NFKB1-212ENST00000600343 FAM74A4Q5TZK3 123 aa7.21□□□□□ -1.26
NFKB1-212ENST00000600343 U3KQE9 123 aa7.21□□□□□ -1.26
NFKB1-212ENST00000600343 WNK2Q9Y3S1 2297 aa7.21□□□□□ -1.26
NFKB1-212ENST00000600343 IGLV11-55A0A075B6I3 123 aa7.2□□□□□ -1.26
NFKB1-212ENST00000600343 RNASE3P12724 160 aaKnown RBP7.2□□□□□ -1.26
NFKB1-212ENST00000600343 CCL4P13236 92 aa7.2□□□□□ -1.26
NFKB1-212ENST00000600343 BLCAPP62952 87 aa7.2□□□□□ -1.26
NFKB1-212ENST00000600343 CFHR3Q02985 330 aa7.2□□□□□ -1.26
NFKB1-212ENST00000600343 PRR15Q8IV56 129 aa7.2□□□□□ -1.26
NFKB1-212ENST00000600343 ZNF625Q96I27 306 aaPredicted RBP7.2□□□□□ -1.26
NFKB1-212ENST00000600343 OVOL2Q9BRP0 275 aa7.2□□□□□ -1.26
NFKB1-212ENST00000600343 NCOR1O75376 2440 aa7.2□□□□□ -1.26
NFKB1-212ENST00000600343 CLPSL1A2RUU4 121 aa7.2□□□□□ -1.26
NFKB1-212ENST00000600343 CTSGP08311 255 aa7.2□□□□□ -1.26
NFKB1-212ENST00000600343 SAA4P35542 130 aa7.2□□□□□ -1.26
NFKB1-212ENST00000600343 MRPL53Q96EL3 112 aaKnown RBP7.2□□□□□ -1.26
NFKB1-212ENST00000600343 IGHV1-46P01743 117 aa7.2□□□□□ -1.26
NFKB1-212ENST00000600343 RNASE13Q5GAN3 156 aaKnown RBP7.2□□□□□ -1.26
NFKB1-212ENST00000600343 SPTBN1Q01082 2364 aaKnown RBP7.2□□□□□ -1.26
NFKB1-212ENST00000600343 TRBV6-5A0A0K0K1A5 114 aa7.19□□□□□ -1.26
NFKB1-212ENST00000600343 IGHV1-8P0DP01 117 aa7.19□□□□□ -1.26
NFKB1-212ENST00000600343 RNASE4P34096 147 aaKnown RBP7.19□□□□□ -1.26
NFKB1-212ENST00000600343 OBSCN-AS1Q96MR7 158 aa7.19□□□□□ -1.26
NFKB1-212ENST00000600343 SPRR3Q9UBC9 169 aa7.19□□□□□ -1.26
NFKB1-212ENST00000600343 PRUNE2Q8WUY3 3088 aa7.19□□□□□ -1.26
NFKB1-212ENST00000600343 PLAC8L1A1L4L8 177 aa7.19□□□□□ -1.26
NFKB1-212ENST00000600343 PAX4O43316 350 aa7.19□□□□□ -1.26
NFKB1-212ENST00000600343 NDUFB3O43676 98 aa7.19□□□□□ -1.26
NFKB1-212ENST00000600343 HIST2H2BCQ6DN03 193 aa7.19□□□□□ -1.26
NFKB1-212ENST00000600343 HIST2H2BDQ6DRA6 164 aa7.19□□□□□ -1.26
NFKB1-212ENST00000600343 IGHV3-49A0A0A0MS15 119 aa7.18□□□□□ -1.26
NFKB1-212ENST00000600343 FAM229BQ4G0N7 80 aa7.18□□□□□ -1.26
NFKB1-212ENST00000600343 C1orf158Q8N1D5 194 aa7.18□□□□□ -1.26
NFKB1-212ENST00000600343 PRSS33Q8NF86 280 aa7.18□□□□□ -1.26
NFKB1-212ENST00000600343 LENEPQ9Y5L5 61 aa7.18□□□□□ -1.26
NFKB1-212ENST00000600343 M0R1B8 84 aa7.18□□□□□ -1.26
NFKB1-212ENST00000600343 NDUFA1O15239 70 aa7.18□□□□□ -1.26
NFKB1-212ENST00000600343 MNX1P50219 401 aaPredicted RBP7.18□□□□□ -1.26
NFKB1-212ENST00000600343 Q6ZRU5 148 aa7.18□□□□□ -1.26
NFKB1-212ENST00000600343 ZFAND2AQ8N6M9 145 aa7.18□□□□□ -1.26
NFKB1-212ENST00000600343 WDFY4Q6ZS81 3184 aa7.18□□□□□ -1.26
NFKB1-212ENST00000600343 APC2O95996 2303 aa7.18□□□□□ -1.26
NFKB1-212ENST00000600343 A0A087WYN8 130 aa7.18□□□□□ -1.26
NFKB1-212ENST00000600343 NDUFC1O43677 76 aa7.18□□□□□ -1.26
NFKB1-212ENST00000600343 ZNF576Q9H609 170 aa7.18□□□□□ -1.26
NFKB1-212ENST00000600343 MGAQ8IWI9 3026 aa7.18□□□□□ -1.26
NFKB1-212ENST00000600343 TRAV13-2A0A0B4J235 113 aa7.17□□□□□ -1.26
NFKB1-212ENST00000600343 BCE1O60756 84 aa7.17□□□□□ -1.26
NFKB1-212ENST00000600343 C15orf32Q32M92 178 aa7.17□□□□□ -1.26
NFKB1-212ENST00000600343 PIK3CD-AS1Q5SR53 167 aa7.17□□□□□ -1.26
NFKB1-212ENST00000600343 CELSR3Q9NYQ7 3312 aa7.17□□□□□ -1.26
NFKB1-212ENST00000600343 Q9H8V8 135 aa7.17□□□□□ -1.26
NFKB1-212ENST00000600343 CHD9Q3L8U1 2897 aa7.16□□□□□ -1.26
NFKB1-212ENST00000600343 TRIOBPQ9H2D6 2365 aa7.16□□□□□ -1.26
NFKB1-212ENST00000600343 TRBV10-3A0A0K0K1G6 114 aa7.16□□□□□ -1.26
NFKB1-212ENST00000600343 LAMTOR3Q9UHA4 124 aa7.16□□□□□ -1.26
NFKB1-212ENST00000600343 MUC4Q99102 2169 aa7.15□□□□□ -1.26
NFKB1-212ENST00000600343 LYPD2Q6UXB3 125 aa7.15□□□□□ -1.26
NFKB1-212ENST00000600343 MRPL55Q7Z7F7 128 aaKnown RBP7.15□□□□□ -1.26
NFKB1-212ENST00000600343 RNF5Q99942 180 aa7.15□□□□□ -1.26
NFKB1-212ENST00000600343 CACNA1HO95180 2353 aa7.15□□□□□ -1.26
NFKB1-212ENST00000600343 IGLV3-9A0A075B6K5 115 aa7.15□□□□□ -1.26
NFKB1-212ENST00000600343 CRPP02741 224 aa7.15□□□□□ -1.26
NFKB1-212ENST00000600343 COX7A1P24310 79 aa7.15□□□□□ -1.26
NFKB1-212ENST00000600343 UBL5Q9BZL1 73 aa7.15□□□□□ -1.26
NFKB1-212ENST00000600343 MIR7-3HGQ8N6C7 128 aa7.15□□□□□ -1.27
NFKB1-212ENST00000600343 EP300Q09472 2414 aaPredicted RBP7.14□□□□□ -1.27
NFKB1-212ENST00000600343 SPTBN5Q9NRC6 3674 aaKnown RBP7.14□□□□□ -1.27
NFKB1-212ENST00000600343 LY6G6EA0A0G2JKS1 128 aa7.14□□□□□ -1.27
NFKB1-212ENST00000600343 M0QY20 66 aa7.14□□□□□ -1.27
NFKB1-212ENST00000600343 U3KQA8 63 aa7.14□□□□□ -1.27
NFKB1-212ENST00000600343 LECT2O14960 151 aa7.14□□□□□ -1.27
NFKB1-212ENST00000600343 DAD1P61803 113 aa7.14□□□□□ -1.27
NFKB1-212ENST00000600343 REV3LO60673 3130 aa7.14□□□□□ -1.27
NFKB1-212ENST00000600343 IGLV1-47P01700 117 aa7.13□□□□□ -1.27
NFKB1-212ENST00000600343 CDKN2A-AS1Q9UH64 79 aa7.13□□□□□ -1.27
NFKB1-212ENST00000600343 DCHS1Q96JQ0 3298 aa7.13□□□□□ -1.27
NFKB1-212ENST00000600343 PKDREJQ9NTG1 2253 aa7.13□□□□□ -1.27
NFKB1-212ENST00000600343 TRAV10A0A0B4J240 114 aa7.12□□□□□ -1.27
NFKB1-212ENST00000600343 MIFP14174 115 aa7.12□□□□□ -1.27
NFKB1-212ENST00000600343 DEFB1P60022 68 aa7.12□□□□□ -1.27
NFKB1-212ENST00000600343 ESRGQ1W209 222 aa7.12□□□□□ -1.27
NFKB1-212ENST00000600343 GPR179Q6PRD1 2367 aa7.12□□□□□ -1.27
NFKB1-212ENST00000600343 PF4P02776 101 aa7.12□□□□□ -1.27
NFKB1-212ENST00000600343 SLPIP03973 132 aa7.12□□□□□ -1.27
NFKB1-212ENST00000600343 C4orf48Q5BLP8 95 aa7.12□□□□□ -1.27
NFKB1-212ENST00000600343 FAM110DQ8TAY7 271 aaPredicted RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms