RNA–Protein interactions for RNA: ENST00000599563.5

SH2D3A-208, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 845 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-208ENST00000599563 DNAH11Q96DT5 4516 aa8.71□□□□□ -1.01
SH2D3A-208ENST00000599563 TRBV6-5A0A0K0K1A5 114 aa8.71□□□□□ -1.02
SH2D3A-208ENST00000599563 DNAH10OSP0CZ25 163 aa8.71□□□□□ -1.02
SH2D3A-208ENST00000599563 ORMDL3Q8N138 153 aa8.71□□□□□ -1.02
SH2D3A-208ENST00000599563 ATP6V0E2Q8NHE4 81 aa8.71□□□□□ -1.02
SH2D3A-208ENST00000599563 TNFRSF18Q9Y5U5 241 aa8.71□□□□□ -1.02
SH2D3A-208ENST00000599563 HERC2O95714 4834 aa8.7□□□□□ -1.02
SH2D3A-208ENST00000599563 KIAA1109Q2LD37 5005 aa8.7□□□□□ -1.02
SH2D3A-208ENST00000599563 TRAV8-6A0A0B4J262 113 aa8.7□□□□□ -1.02
SH2D3A-208ENST00000599563 SDHAF1A6NFY7 115 aa8.7□□□□□ -1.02
SH2D3A-208ENST00000599563 RAB5AP20339 215 aa8.7□□□□□ -1.02
SH2D3A-208ENST00000599563 POLR2KP53803 58 aaKnown RBP8.7□□□□□ -1.02
SH2D3A-208ENST00000599563 NTM-AS1Q6ZSK4 140 aa8.7□□□□□ -1.02
SH2D3A-208ENST00000599563 TMEM70Q9BUB7 260 aa8.7□□□□□ -1.02
SH2D3A-208ENST00000599563 ST20Q9HBF5 79 aa8.7□□□□□ -1.02
SH2D3A-208ENST00000599563 PHOX2AO14813 284 aa8.69□□□□□ -1.02
SH2D3A-208ENST00000599563 PPBPP02775 128 aa8.69□□□□□ -1.02
SH2D3A-208ENST00000599563 TRGC2P03986 189 aa8.69□□□□□ -1.02
SH2D3A-208ENST00000599563 SUMO2P61956 95 aaKnown RBP8.69□□□□□ -1.02
SH2D3A-208ENST00000599563 IQCJQ1A5X6 159 aa8.69□□□□□ -1.02
SH2D3A-208ENST00000599563 ALKBH7Q9BT30 221 aaPredicted RBP8.69□□□□□ -1.02
SH2D3A-208ENST00000599563 LOC389332A0A1B0GUA5 103 aa8.68□□□□□ -1.02
SH2D3A-208ENST00000599563 CDK2AP2O75956 126 aa8.68□□□□□ -1.02
SH2D3A-208ENST00000599563 Q6ZRN7 208 aaPredicted RBP8.68□□□□□ -1.02
SH2D3A-208ENST00000599563 SPATA12Q7Z6I5 190 aa8.68□□□□□ -1.02
SH2D3A-208ENST00000599563 WFDC10BQ8IUB3 73 aa8.68□□□□□ -1.02
SH2D3A-208ENST00000599563 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.68□□□□□ -1.02
SH2D3A-208ENST00000599563 SMIM2Q9BVW6 85 aa8.68□□□□□ -1.02
SH2D3A-208ENST00000599563 GTSF1LQ9H1H1 148 aa8.68□□□□□ -1.02
SH2D3A-208ENST00000599563 TSHBP01222 138 aa8.67□□□□□ -1.02
SH2D3A-208ENST00000599563 LINC01556Q5JQF7 62 aa8.66□□□□□ -1.02
SH2D3A-208ENST00000599563 LELP1Q5T871 98 aa8.66□□□□□ -1.02
SH2D3A-208ENST00000599563 CDPF1Q6NVV7 123 aa8.66□□□□□ -1.02
SH2D3A-208ENST00000599563 DAZ4Q86SG3 579 aaKnown RBP8.66□□□□□ -1.02
SH2D3A-208ENST00000599563 C20orf78Q9BR46 151 aa8.66□□□□□ -1.02
SH2D3A-208ENST00000599563 MAP1LC3AQ9H492 121 aa8.66□□□□□ -1.02
SH2D3A-208ENST00000599563 DAZ3Q9NR90 486 aaKnown RBP8.66□□□□□ -1.02
SH2D3A-208ENST00000599563 PGPEP1Q9NXJ5 209 aa8.66□□□□□ -1.02
SH2D3A-208ENST00000599563 LAMTOR2Q9Y2Q5 125 aa8.66□□□□□ -1.02
SH2D3A-208ENST00000599563 DYNC1H1Q14204 4646 aaKnown RBP8.65□□□□□ -1.02
SH2D3A-208ENST00000599563 TRBV27A0A0K0K1C4 114 aa8.65□□□□□ -1.02
SH2D3A-208ENST00000599563 I3L3M4 83 aa8.65□□□□□ -1.02
SH2D3A-208ENST00000599563 TCAPO15273 167 aa8.65□□□□□ -1.02
SH2D3A-208ENST00000599563 PPP1R17O96001 155 aa8.65□□□□□ -1.02
SH2D3A-208ENST00000599563 PMCHP20382 165 aa8.65□□□□□ -1.02
SH2D3A-208ENST00000599563 Q8N3U1 123 aa8.65□□□□□ -1.02
SH2D3A-208ENST00000599563 C18orf32Q8TCD1 76 aa8.65□□□□□ -1.02
SH2D3A-208ENST00000599563 TRBV6-8A0A0A6YYG3 113 aa8.64□□□□□ -1.03
SH2D3A-208ENST00000599563 PRSS47A8MTI9 375 aa8.64□□□□□ -1.03
SH2D3A-208ENST00000599563 IFI27P40305 119 aaPredicted RBP8.64□□□□□ -1.03
SH2D3A-208ENST00000599563 RPL32P62910 135 aaKnown RBP8.64□□□□□ -1.03
SH2D3A-208ENST00000599563 COTL1Q14019 142 aa8.64□□□□□ -1.03
SH2D3A-208ENST00000599563 URB1-AS1Q96HZ7 61 aa8.64□□□□□ -1.03
SH2D3A-208ENST00000599563 CHCHD7Q9BUK0 85 aa8.64□□□□□ -1.03
SH2D3A-208ENST00000599563 VCYO14598 125 aa8.63□□□□□ -1.03
SH2D3A-208ENST00000599563 Q8N8P6 123 aa8.63□□□□□ -1.03
SH2D3A-208ENST00000599563 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.62□□□□□ -1.03
SH2D3A-208ENST00000599563 IGHV1-24A0A0C4DH33 117 aa8.62□□□□□ -1.03
SH2D3A-208ENST00000599563 IGKV2-29A2NJV5 120 aaPredicted RBP8.62□□□□□ -1.03
SH2D3A-208ENST00000599563 IBA57-AS1B1ANH7 110 aa8.62□□□□□ -1.03
SH2D3A-208ENST00000599563 AMTP48728 403 aa8.62□□□□□ -1.03
SH2D3A-208ENST00000599563 GAGE6Q13070 117 aa8.62□□□□□ -1.03
SH2D3A-208ENST00000599563 LAGE3Q14657 143 aa8.62□□□□□ -1.03
SH2D3A-208ENST00000599563 TRBV25-1A0A075B6N4 114 aa8.61□□□□□ -1.03
SH2D3A-208ENST00000599563 A0A087WTM6 91 aa8.61□□□□□ -1.03
SH2D3A-208ENST00000599563 PSCAO43653 123 aa8.61□□□□□ -1.03
SH2D3A-208ENST00000599563 ESDP10768 282 aa8.61□□□□□ -1.03
SH2D3A-208ENST00000599563 KRTAP10-2P60368 255 aa8.61□□□□□ -1.03
SH2D3A-208ENST00000599563 FCER1GP30273 86 aa8.6□□□□□ -1.03
SH2D3A-208ENST00000599563 TMEM97Q5BJF2 176 aa8.6□□□□□ -1.03
SH2D3A-208ENST00000599563 NIT1Q86X76 327 aa8.6□□□□□ -1.03
SH2D3A-208ENST00000599563 KIR2DL4Q99706 377 aa8.6□□□□□ -1.03
SH2D3A-208ENST00000599563 CHCHD5Q9BSY4 110 aa8.6□□□□□ -1.03
SH2D3A-208ENST00000599563 TMEM243Q9BU79 118 aa8.6□□□□□ -1.03
SH2D3A-208ENST00000599563 TM2D2Q9BX73 214 aa8.6□□□□□ -1.03
SH2D3A-208ENST00000599563 HIST1H2BKO60814 126 aa8.59□□□□□ -1.03
SH2D3A-208ENST00000599563 IGHV3-30P01768 117 aa8.59□□□□□ -1.03
SH2D3A-208ENST00000599563 IGHV3-33P01772 117 aa8.59□□□□□ -1.03
SH2D3A-208ENST00000599563 HIST1H2BJP06899 126 aa8.59□□□□□ -1.03
SH2D3A-208ENST00000599563 IGHV3-30-3P0DP02 117 aa8.59□□□□□ -1.03
SH2D3A-208ENST00000599563 IGHV3-30-5P0DP03 117 aa8.59□□□□□ -1.03
SH2D3A-208ENST00000599563 HIST1H2BOP23527 126 aa8.59□□□□□ -1.03
SH2D3A-208ENST00000599563 HIST1H2BBP33778 126 aa8.59□□□□□ -1.03
SH2D3A-208ENST00000599563 HIST1H2BDP58876 126 aa8.59□□□□□ -1.03
SH2D3A-208ENST00000599563 LINC00310P59036 64 aa8.59□□□□□ -1.03
SH2D3A-208ENST00000599563 HIST1H2BCP62807 126 aa8.59□□□□□ -1.03
SH2D3A-208ENST00000599563 RPL39P62891 51 aaKnown RBP8.59□□□□□ -1.03
SH2D3A-208ENST00000599563 HIST2H2BEQ16778 126 aa8.59□□□□□ -1.03
SH2D3A-208ENST00000599563 MPV17L2Q567V2 206 aa8.59□□□□□ -1.03
SH2D3A-208ENST00000599563 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.59□□□□□ -1.03
SH2D3A-208ENST00000599563 PRSS3P2Q8NHM4 247 aa8.59□□□□□ -1.03
SH2D3A-208ENST00000599563 HIST1H2BHQ93079 126 aa8.59□□□□□ -1.03
SH2D3A-208ENST00000599563 HIST1H2BNQ99877 126 aa8.59□□□□□ -1.03
SH2D3A-208ENST00000599563 HIST1H2BMQ99879 126 aa8.59□□□□□ -1.03
SH2D3A-208ENST00000599563 NXT2Q9NPJ8 142 aaKnown RBP8.59□□□□□ -1.03
SH2D3A-208ENST00000599563 TRAV8-3A0A0A6YYJ7 113 aa8.58□□□□□ -1.04
SH2D3A-208ENST00000599563 Q8N976 141 aa8.58□□□□□ -1.04
SH2D3A-208ENST00000599563 A0A096LNJ9 63 aa8.57□□□□□ -1.04
SH2D3A-208ENST00000599563 LINC01546A6NGU7 62 aa8.57□□□□□ -1.04
SH2D3A-208ENST00000599563 RNASEKQ6P5S7 137 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms