RNA–Protein interactions for RNA: ENST00000598717.5

LTBP4-223, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 5

Gene LTBP4, Length 811 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-223ENST00000598717 HIST1H2BJP06899 126 aa13.29□□□□□ -0.28
LTBP4-223ENST00000598717 HIST1H2BOP23527 126 aa13.29□□□□□ -0.28
LTBP4-223ENST00000598717 HIST1H2BBP33778 126 aa13.29□□□□□ -0.28
LTBP4-223ENST00000598717 HIST1H2BDP58876 126 aa13.29□□□□□ -0.28
LTBP4-223ENST00000598717 HIST1H2BCP62807 126 aa13.29□□□□□ -0.28
LTBP4-223ENST00000598717 HIST2H2BEQ16778 126 aa13.29□□□□□ -0.28
LTBP4-223ENST00000598717 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.29□□□□□ -0.28
LTBP4-223ENST00000598717 NIT1Q86X76 327 aa13.29□□□□□ -0.28
LTBP4-223ENST00000598717 UBE2DNLQ8IWF7 75 aa13.29□□□□□ -0.28
LTBP4-223ENST00000598717 HIST1H2BHQ93079 126 aa13.29□□□□□ -0.28
LTBP4-223ENST00000598717 HIST1H2BNQ99877 126 aa13.29□□□□□ -0.28
LTBP4-223ENST00000598717 HIST1H2BMQ99879 126 aa13.29□□□□□ -0.28
LTBP4-223ENST00000598717 DYNC2H1Q8NCM8 4307 aaKnown RBP13.28□□□□□ -0.28
LTBP4-223ENST00000598717 K7EMI3 77 aa13.28□□□□□ -0.28
LTBP4-223ENST00000598717 LINC00614P0C842 121 aa13.28□□□□□ -0.28
LTBP4-223ENST00000598717 ORMDL2Q53FV1 153 aa13.28□□□□□ -0.28
LTBP4-223ENST00000598717 LINC00588Q9Y4M8 146 aa13.28□□□□□ -0.28
LTBP4-223ENST00000598717 LAGE3Q14657 143 aa13.27□□□□□ -0.29
LTBP4-223ENST00000598717 RNASEKQ6P5S7 137 aaKnown RBP13.27□□□□□ -0.29
LTBP4-223ENST00000598717 CHCHD5Q9BSY4 110 aa13.27□□□□□ -0.29
LTBP4-223ENST00000598717 TMEM243Q9BU79 118 aa13.27□□□□□ -0.29
LTBP4-223ENST00000598717 UBE2L6O14933 153 aa13.26□□□□□ -0.29
LTBP4-223ENST00000598717 AP5S1Q9NUS5 200 aa13.26□□□□□ -0.29
LTBP4-223ENST00000598717 MRPS16Q9Y3D3 137 aaKnown RBP13.26□□□□□ -0.29
LTBP4-223ENST00000598717 CHCHD1Q96BP2 118 aaKnown RBP13.25□□□□□ -0.29
LTBP4-223ENST00000598717 CHCHD7Q9BUK0 85 aa13.25□□□□□ -0.29
LTBP4-223ENST00000598717 CSMD3Q7Z407 3707 aa13.24□□□□□ -0.29
LTBP4-223ENST00000598717 LINC01546A6NGU7 62 aa13.24□□□□□ -0.29
LTBP4-223ENST00000598717 ESDP10768 282 aa13.24□□□□□ -0.29
LTBP4-223ENST00000598717 TMEM18Q96B42 140 aa13.24□□□□□ -0.29
LTBP4-223ENST00000598717 URB1-AS1Q96HZ7 61 aa13.24□□□□□ -0.29
LTBP4-223ENST00000598717 TMEM262E9PQX1 116 aa13.23□□□□□ -0.29
LTBP4-223ENST00000598717 G0S2P27469 103 aa13.23□□□□□ -0.29
LTBP4-223ENST00000598717 STARD9Q9P2P6 4700 aa13.23□□□□□ -0.29
LTBP4-223ENST00000598717 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.22□□□□□ -0.29
LTBP4-223ENST00000598717 IGKV2-29A2NJV5 120 aaPredicted RBP13.22□□□□□ -0.29
LTBP4-223ENST00000598717 H7C423 109 aa13.22□□□□□ -0.29
LTBP4-223ENST00000598717 NDUFA6P56556 154 aa13.22□□□□□ -0.29
LTBP4-223ENST00000598717 PKIAP61925 76 aa13.22□□□□□ -0.29
LTBP4-223ENST00000598717 GAGE6Q13070 117 aa13.22□□□□□ -0.29
LTBP4-223ENST00000598717 C20orf203Q8NBC4 194 aa13.22□□□□□ -0.29
LTBP4-223ENST00000598717 UPK3BQ9BT76 320 aa13.22□□□□□ -0.29
LTBP4-223ENST00000598717 HSBP1O75506 76 aa13.21□□□□□ -0.29
LTBP4-223ENST00000598717 SERF1AO75920 110 aa13.21□□□□□ -0.29
LTBP4-223ENST00000598717 BTF3P20290 206 aaKnown RBP13.21□□□□□ -0.29
LTBP4-223ENST00000598717 WFDC10BQ8IUB3 73 aa13.21□□□□□ -0.29
LTBP4-223ENST00000598717 SMAGPQ0VAQ4 97 aa13.2□□□□□ -0.3
LTBP4-223ENST00000598717 AMMECR1LQ6DCA0 310 aa13.2□□□□□ -0.3
LTBP4-223ENST00000598717 LGALS9CQ6DKI2 356 aa13.2□□□□□ -0.3
LTBP4-223ENST00000598717 CYSLTR1Q9Y271 337 aa13.2□□□□□ -0.3
LTBP4-223ENST00000598717 A0A087WX48 190 aa13.19□□□□□ -0.3
LTBP4-223ENST00000598717 SIVA1O15304 175 aa13.19□□□□□ -0.3
LTBP4-223ENST00000598717 C2orf66Q6UXQ4 117 aa13.19□□□□□ -0.3
LTBP4-223ENST00000598717 FGF6P10767 208 aa13.18□□□□□ -0.3
LTBP4-223ENST00000598717 RPL39P62891 51 aaKnown RBP13.18□□□□□ -0.3
LTBP4-223ENST00000598717 Q9H8V8 135 aa13.18□□□□□ -0.3
LTBP4-223ENST00000598717 PLECQ15149 4684 aaKnown RBP13.17□□□□□ -0.3
LTBP4-223ENST00000598717 LINC01549A6NIU2 74 aa13.17□□□□□ -0.3
LTBP4-223ENST00000598717 S100A6P06703 90 aa13.17□□□□□ -0.3
LTBP4-223ENST00000598717 LINC00310P59036 64 aa13.17□□□□□ -0.3
LTBP4-223ENST00000598717 PMCHL1Q16048 86 aa13.17□□□□□ -0.3
LTBP4-223ENST00000598717 DGAT2L7PQ6IED9 249 aa13.17□□□□□ -0.3
LTBP4-223ENST00000598717 LY6G6CO95867 125 aa13.16□□□□□ -0.3
LTBP4-223ENST00000598717 HBDP02042 147 aa13.16□□□□□ -0.3
LTBP4-223ENST00000598717 COA6Q5JTJ3 125 aaKnown RBP13.16□□□□□ -0.3
LTBP4-223ENST00000598717 TOMM6Q96B49 74 aa13.16□□□□□ -0.3
LTBP4-223ENST00000598717 TMEM101Q96IK0 257 aa13.16□□□□□ -0.3
LTBP4-223ENST00000598717 NUPR1O60356 82 aa13.15□□□□□ -0.3
LTBP4-223ENST00000598717 IGHV3-30P01768 117 aa13.15□□□□□ -0.3
LTBP4-223ENST00000598717 IGHV3-33P01772 117 aa13.15□□□□□ -0.3
LTBP4-223ENST00000598717 DNAH10OSP0CZ25 163 aa13.15□□□□□ -0.3
LTBP4-223ENST00000598717 IGHV3-30-3P0DP02 117 aa13.15□□□□□ -0.3
LTBP4-223ENST00000598717 IGHV3-30-5P0DP03 117 aa13.15□□□□□ -0.3
LTBP4-223ENST00000598717 ZNF25P17030 456 aaPredicted RBP13.15□□□□□ -0.3
LTBP4-223ENST00000598717 MPV17L2Q567V2 206 aa13.15□□□□□ -0.3
LTBP4-223ENST00000598717 LINC01556Q5JQF7 62 aa13.15□□□□□ -0.3
LTBP4-223ENST00000598717 MRPL52Q86TS9 123 aaKnown RBP13.15□□□□□ -0.3
LTBP4-223ENST00000598717 UBE2D4Q9Y2X8 147 aa13.15□□□□□ -0.3
LTBP4-223ENST00000598717 A0A1B0GUV1 79 aa13.14□□□□□ -0.31
LTBP4-223ENST00000598717 RBX1P62877 108 aa13.14□□□□□ -0.31
LTBP4-223ENST00000598717 FAM19A2Q8N3H0 131 aa13.14□□□□□ -0.31
LTBP4-223ENST00000598717 OR5A1Q8NGJ0 315 aa13.14□□□□□ -0.31
LTBP4-223ENST00000598717 LINC00476Q8WZB0 136 aa13.14□□□□□ -0.31
LTBP4-223ENST00000598717 TIMM21Q9BVV7 248 aa13.14□□□□□ -0.31
LTBP4-223ENST00000598717 SPANXA1Q9NS26 97 aa13.14□□□□□ -0.31
LTBP4-223ENST00000598717 Q8N976 141 aa13.13□□□□□ -0.31
LTBP4-223ENST00000598717 SCGB3A1Q96QR1 104 aa13.13□□□□□ -0.31
LTBP4-223ENST00000598717 TRAV9-2A0A087WT02 112 aa13.12□□□□□ -0.31
LTBP4-223ENST00000598717 A0A096LNJ9 63 aa13.12□□□□□ -0.31
LTBP4-223ENST00000598717 Q8N3U1 123 aa13.12□□□□□ -0.31
LTBP4-223ENST00000598717 PYGO1Q9Y3Y4 419 aa13.12□□□□□ -0.31
LTBP4-223ENST00000598717 CSDC2Q9Y534 153 aaKnown RBP13.12□□□□□ -0.31
LTBP4-223ENST00000598717 TENM2Q9NT68 2774 aa13.11□□□□□ -0.31
LTBP4-223ENST00000598717 ANGP03950 147 aaKnown RBP13.11□□□□□ -0.31
LTBP4-223ENST00000598717 ERASQ7Z444 233 aa13.11□□□□□ -0.31
LTBP4-223ENST00000598717 TMA7Q9Y2S6 64 aaKnown RBP13.11□□□□□ -0.31
LTBP4-223ENST00000598717 IGLV4-60A0A075B6I1 120 aa13.1□□□□□ -0.31
LTBP4-223ENST00000598717 TIMM17AQ99595 171 aa13.1□□□□□ -0.31
LTBP4-223ENST00000598717 IGIPA6NJ69 53 aa13.09□□□□□ -0.31
LTBP4-223ENST00000598717 K7EP13 123 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms