RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 A0A1B0GW15 77 aa9.19□□□□□ -0.94
UPF1-205ENST00000598209 UBE2L6O14933 153 aa9.19□□□□□ -0.94
UPF1-205ENST00000598209 RPS10P46783 165 aaKnown RBP9.19□□□□□ -0.94
UPF1-205ENST00000598209 CAMPP49913 170 aa9.19□□□□□ -0.94
UPF1-205ENST00000598209 MRPL54Q6P161 138 aaKnown RBP9.19□□□□□ -0.94
UPF1-205ENST00000598209 UQCC3Q6UW78 93 aa9.19□□□□□ -0.94
UPF1-205ENST00000598209 MAPKAPK5-AS1Q8N8E1 139 aa9.19□□□□□ -0.94
UPF1-205ENST00000598209 ST20Q9HBF5 79 aa9.19□□□□□ -0.94
UPF1-205ENST00000598209 SMKR1H3BMG3 65 aa9.18□□□□□ -0.94
UPF1-205ENST00000598209 NCR2O95944 276 aa9.18□□□□□ -0.94
UPF1-205ENST00000598209 PMCHP20382 165 aa9.18□□□□□ -0.94
UPF1-205ENST00000598209 WFDC2Q14508 124 aa9.18□□□□□ -0.94
UPF1-205ENST00000598209 FAM104BQ5XKR9 115 aa9.18□□□□□ -0.94
UPF1-205ENST00000598209 CLPSL2Q6UWE3 100 aa9.18□□□□□ -0.94
UPF1-205ENST00000598209 LINC00269Q8N2A0 174 aa9.18□□□□□ -0.94
UPF1-205ENST00000598209 Q8N814 137 aa9.18□□□□□ -0.94
UPF1-205ENST00000598209 DNAH5Q8TE73 4624 aa9.18□□□□□ -0.94
UPF1-205ENST00000598209 C1orf43Q9BWL3 253 aa9.18□□□□□ -0.94
UPF1-205ENST00000598209 LRP1BQ9NZR2 4599 aa9.18□□□□□ -0.94
UPF1-205ENST00000598209 A0A1B0GUV1 79 aa9.17□□□□□ -0.94
UPF1-205ENST00000598209 I3L3M4 83 aa9.17□□□□□ -0.94
UPF1-205ENST00000598209 LECT2O14960 151 aa9.17□□□□□ -0.94
UPF1-205ENST00000598209 APCSP02743 223 aa9.17□□□□□ -0.94
UPF1-205ENST00000598209 MT-ND4LP03901 98 aa9.17□□□□□ -0.94
UPF1-205ENST00000598209 HBBP68871 147 aa9.17□□□□□ -0.94
UPF1-205ENST00000598209 MIAQ16674 131 aa9.17□□□□□ -0.94
UPF1-205ENST00000598209 MRPL51Q4U2R6 128 aaKnown RBP9.17□□□□□ -0.94
UPF1-205ENST00000598209 C20orf203Q8NBC4 194 aa9.17□□□□□ -0.94
UPF1-205ENST00000598209 BAALCQ8WXS3 180 aa9.17□□□□□ -0.94
UPF1-205ENST00000598209 ANAPC16Q96DE5 110 aa9.17□□□□□ -0.94
UPF1-205ENST00000598209 TMEM70Q9BUB7 260 aa9.17□□□□□ -0.94
UPF1-205ENST00000598209 PRR34Q9NV39 138 aa9.17□□□□□ -0.94
UPF1-205ENST00000598209 IGLV4-60A0A075B6I1 120 aa9.16□□□□□ -0.94
UPF1-205ENST00000598209 A0A1B0GXF2 115 aa9.16□□□□□ -0.94
UPF1-205ENST00000598209 S100A8P05109 93 aa9.16□□□□□ -0.94
UPF1-205ENST00000598209 NTN5Q8WTR8 489 aaPredicted RBP9.16□□□□□ -0.94
UPF1-205ENST00000598209 HERC2O95714 4834 aa9.15□□□□□ -0.94
UPF1-205ENST00000598209 IGLV5-52A0A0A0MRZ9 124 aa9.15□□□□□ -0.94
UPF1-205ENST00000598209 TMEM218A2RU14 115 aa9.15□□□□□ -0.94
UPF1-205ENST00000598209 F8W036 122 aa9.15□□□□□ -0.94
UPF1-205ENST00000598209 CDK2AP2O75956 126 aa9.15□□□□□ -0.94
UPF1-205ENST00000598209 PPP1R17O96001 155 aa9.15□□□□□ -0.94
UPF1-205ENST00000598209 ADCYAP1P18509 176 aa9.15□□□□□ -0.94
UPF1-205ENST00000598209 POLR2KP53803 58 aaKnown RBP9.15□□□□□ -0.94
UPF1-205ENST00000598209 COMMD7Q86VX2 200 aa9.15□□□□□ -0.94
UPF1-205ENST00000598209 NRACQ8N912 160 aa9.15□□□□□ -0.94
UPF1-205ENST00000598209 TMEM242Q9NWH2 141 aa9.15□□□□□ -0.94
UPF1-205ENST00000598209 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.14□□□□□ -0.95
UPF1-205ENST00000598209 TRBV27A0A0K0K1C4 114 aa9.14□□□□□ -0.95
UPF1-205ENST00000598209 IGKV2-29A2NJV5 120 aaPredicted RBP9.14□□□□□ -0.95
UPF1-205ENST00000598209 TSHBP01222 138 aa9.14□□□□□ -0.95
UPF1-205ENST00000598209 REG3AQ06141 175 aa9.14□□□□□ -0.95
UPF1-205ENST00000598209 ATP5L2Q7Z4Y8 100 aa9.14□□□□□ -0.95
UPF1-205ENST00000598209 LINC00862A6NCI5 91 aa9.13□□□□□ -0.95
UPF1-205ENST00000598209 H7C423 109 aa9.13□□□□□ -0.95
UPF1-205ENST00000598209 GCSHP23434 173 aa9.13□□□□□ -0.95
UPF1-205ENST00000598209 CKS2P33552 79 aa9.13□□□□□ -0.95
UPF1-205ENST00000598209 KRTAP10-1P60331 282 aa9.13□□□□□ -0.95
UPF1-205ENST00000598209 SUMO2P61956 95 aaKnown RBP9.13□□□□□ -0.95
UPF1-205ENST00000598209 AMMECR1LQ6DCA0 310 aa9.13□□□□□ -0.95
UPF1-205ENST00000598209 RYR1P21817 5038 aa9.12□□□□□ -0.95
UPF1-205ENST00000598209 IGLV10-54A0A075B6I4 117 aa9.12□□□□□ -0.95
UPF1-205ENST00000598209 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.12□□□□□ -0.95
UPF1-205ENST00000598209 VCYO14598 125 aa9.12□□□□□ -0.95
UPF1-205ENST00000598209 HLA-DQA1P01909 254 aa9.12□□□□□ -0.95
UPF1-205ENST00000598209 FGF6P10767 208 aa9.12□□□□□ -0.95
UPF1-205ENST00000598209 ESDP10768 282 aa9.12□□□□□ -0.95
UPF1-205ENST00000598209 RNASEKQ6P5S7 137 aaKnown RBP9.12□□□□□ -0.95
UPF1-205ENST00000598209 TRAV8-4A0A0B4J246 113 aa9.11□□□□□ -0.95
UPF1-205ENST00000598209 D6R8Y8 96 aa9.11□□□□□ -0.95
UPF1-205ENST00000598209 KRTAP26-1Q6PEX3 210 aa9.11□□□□□ -0.95
UPF1-205ENST00000598209 SEC11CQ9BY50 192 aa9.11□□□□□ -0.95
UPF1-205ENST00000598209 HSPG2P98160 4391 aa9.1□□□□□ -0.95
UPF1-205ENST00000598209 TRBV24-1A0A075B6N3 115 aa9.1□□□□□ -0.95
UPF1-205ENST00000598209 TNFRSF6BO95407 300 aa9.1□□□□□ -0.95
UPF1-205ENST00000598209 FCER1GP30273 86 aa9.1□□□□□ -0.95
UPF1-205ENST00000598209 C20orf78Q9BR46 151 aa9.1□□□□□ -0.95
UPF1-205ENST00000598209 APOBP04114 4563 aaKnown RBP9.1□□□□□ -0.95
UPF1-205ENST00000598209 IGKV3OR2-268A0A0C4DH90 116 aa9.09□□□□□ -0.95
UPF1-205ENST00000598209 C7orf77A4D0Y5 90 aa9.09□□□□□ -0.95
UPF1-205ENST00000598209 USP17L23D6RBM5 183 aa9.09□□□□□ -0.95
UPF1-205ENST00000598209 NPYP01303 97 aa9.09□□□□□ -0.95
UPF1-205ENST00000598209 PPBPP02775 128 aa9.09□□□□□ -0.95
UPF1-205ENST00000598209 ZNF25P17030 456 aaPredicted RBP9.09□□□□□ -0.95
UPF1-205ENST00000598209 C14orf177Q52M58 125 aa9.09□□□□□ -0.95
UPF1-205ENST00000598209 BTF3L4Q96K17 158 aa9.09□□□□□ -0.95
UPF1-205ENST00000598209 KIR2DL4Q99706 377 aa9.09□□□□□ -0.95
UPF1-205ENST00000598209 RPL32P62910 135 aaKnown RBP9.08□□□□□ -0.96
UPF1-205ENST00000598209 ORMDL3Q8N138 153 aa9.08□□□□□ -0.96
UPF1-205ENST00000598209 TMEM101Q96IK0 257 aa9.08□□□□□ -0.96
UPF1-205ENST00000598209 IMMP2LQ96T52 175 aa9.08□□□□□ -0.96
UPF1-205ENST00000598209 CTDSP1Q9GZU7 261 aa9.08□□□□□ -0.96
UPF1-205ENST00000598209 PHOX2AO14813 284 aa9.07□□□□□ -0.96
UPF1-205ENST00000598209 TMEM136Q6ZRR5 245 aa9.07□□□□□ -0.96
UPF1-205ENST00000598209 MRPL52Q86TS9 123 aaKnown RBP9.07□□□□□ -0.96
UPF1-205ENST00000598209 OR5A1Q8NGJ0 315 aa9.07□□□□□ -0.96
UPF1-205ENST00000598209 SMIM2Q9BVW6 85 aa9.07□□□□□ -0.96
UPF1-205ENST00000598209 PRELID3AQ96N28 172 aa9.06□□□□□ -0.96
UPF1-205ENST00000598209 TCAPO15273 167 aa9.05□□□□□ -0.96
UPF1-205ENST00000598209 XGP55808 180 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 649.5 ms