RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 PRO1854Q9UHT4 67 aa9.19□□□□□ -0.94
USHBP1-207ENST00000597928 HTN3P15516 51 aa9.19□□□□□ -0.94
USHBP1-207ENST00000597928 TM2D2Q9BX73 214 aa9.19□□□□□ -0.94
USHBP1-207ENST00000597928 CRIP2P52943 208 aaPredicted RBP9.18□□□□□ -0.94
USHBP1-207ENST00000597928 CFAP161Q6P656 301 aa9.18□□□□□ -0.94
USHBP1-207ENST00000597928 F8W1H4 67 aa9.18□□□□□ -0.94
USHBP1-207ENST00000597928 LINC01619G3V211 115 aa9.18□□□□□ -0.94
USHBP1-207ENST00000597928 M0QY20 66 aa9.18□□□□□ -0.94
USHBP1-207ENST00000597928 C19orf54Q5BKX5 351 aa9.18□□□□□ -0.94
USHBP1-207ENST00000597928 NOP10Q9NPE3 64 aaKnown RBP9.18□□□□□ -0.94
USHBP1-207ENST00000597928 PEMTQ9UBM1 199 aa9.18□□□□□ -0.94
USHBP1-207ENST00000597928 SOCS3O14543 225 aa9.17□□□□□ -0.94
USHBP1-207ENST00000597928 TCL1BO95988 128 aa9.17□□□□□ -0.94
USHBP1-207ENST00000597928 TSHBP01222 138 aa9.17□□□□□ -0.94
USHBP1-207ENST00000597928 PLA2G2AP14555 144 aa9.17□□□□□ -0.94
USHBP1-207ENST00000597928 PSMB8P28062 276 aa9.17□□□□□ -0.94
USHBP1-207ENST00000597928 K7EQG2 157 aa9.17□□□□□ -0.94
USHBP1-207ENST00000597928 CRYGDP07320 174 aa9.17□□□□□ -0.94
USHBP1-207ENST00000597928 ZNF415Q09FC8 603 aa9.17□□□□□ -0.94
USHBP1-207ENST00000597928 OR13C6PQ8NH95 151 aa9.17□□□□□ -0.94
USHBP1-207ENST00000597928 PSMG3-AS1Q96PY0 264 aa9.17□□□□□ -0.94
USHBP1-207ENST00000597928 TRAV12-1A0A0B4J245 112 aa9.17□□□□□ -0.94
USHBP1-207ENST00000597928 A0A0J9YY99 117 aa9.17□□□□□ -0.94
USHBP1-207ENST00000597928 ZMAT4Q9H898 229 aa9.17□□□□□ -0.94
USHBP1-207ENST00000597928 ITPR2Q14571 2701 aa9.16□□□□□ -0.94
USHBP1-207ENST00000597928 Q6ZUT4 128 aa9.16□□□□□ -0.94
USHBP1-207ENST00000597928 NTN5Q8WTR8 489 aaPredicted RBP9.16□□□□□ -0.94
USHBP1-207ENST00000597928 TMEM141Q96I45 108 aa9.16□□□□□ -0.94
USHBP1-207ENST00000597928 TRGV4A0A0C4DH28 118 aa9.16□□□□□ -0.94
USHBP1-207ENST00000597928 COX8CQ7Z4L0 72 aa9.16□□□□□ -0.94
USHBP1-207ENST00000597928 CHCHD5Q9BSY4 110 aa9.16□□□□□ -0.94
USHBP1-207ENST00000597928 TRBV7-3A0A075B6L6 115 aa9.16□□□□□ -0.94
USHBP1-207ENST00000597928 C20orf203Q8NBC4 194 aa9.16□□□□□ -0.94
USHBP1-207ENST00000597928 SPANXB1Q9NS25 103 aaPredicted RBP9.16□□□□□ -0.94
USHBP1-207ENST00000597928 UBR5O95071 2799 aaPredicted RBP9.15□□□□□ -0.94
USHBP1-207ENST00000597928 M0R2P5 195 aa9.15□□□□□ -0.94
USHBP1-207ENST00000597928 IGLV1-40P01703 118 aa9.15□□□□□ -0.94
USHBP1-207ENST00000597928 Q6ZSN1 163 aa9.15□□□□□ -0.94
USHBP1-207ENST00000597928 NDUFA11Q86Y39 141 aa9.15□□□□□ -0.94
USHBP1-207ENST00000597928 WFDC11Q8NEX6 87 aa9.15□□□□□ -0.94
USHBP1-207ENST00000597928 CLEC2BQ92478 149 aa9.15□□□□□ -0.94
USHBP1-207ENST00000597928 ATP6V0BQ99437 205 aa9.15□□□□□ -0.94
USHBP1-207ENST00000597928 KLLNB2CW77 178 aa9.15□□□□□ -0.95
USHBP1-207ENST00000597928 RS1O15537 224 aa9.15□□□□□ -0.95
USHBP1-207ENST00000597928 COX6CP09669 75 aa9.15□□□□□ -0.95
USHBP1-207ENST00000597928 POLR2KP53803 58 aaKnown RBP9.15□□□□□ -0.95
USHBP1-207ENST00000597928 GAGE6Q13070 117 aa9.15□□□□□ -0.95
USHBP1-207ENST00000597928 DEFB4AO15263 64 aa9.14□□□□□ -0.95
USHBP1-207ENST00000597928 CFC1BP0CG36 223 aa9.14□□□□□ -0.95
USHBP1-207ENST00000597928 CFC1P0CG37 223 aa9.14□□□□□ -0.95
USHBP1-207ENST00000597928 IGHV3-30-3P0DP02 117 aa9.14□□□□□ -0.95
USHBP1-207ENST00000597928 PRIMA1Q86XR5 153 aa9.14□□□□□ -0.95
USHBP1-207ENST00000597928 INSP01308 110 aa9.14□□□□□ -0.95
USHBP1-207ENST00000597928 IGLV4-69A0A075B6H9 119 aa9.14□□□□□ -0.95
USHBP1-207ENST00000597928 RHODO00212 210 aa9.14□□□□□ -0.95
USHBP1-207ENST00000597928 SLC25A20O43772 301 aa9.14□□□□□ -0.95
USHBP1-207ENST00000597928 RBMY1A1P0DJD3 496 aaKnown RBP9.14□□□□□ -0.95
USHBP1-207ENST00000597928 RBMY1CP0DJD4 496 aa9.14□□□□□ -0.95
USHBP1-207ENST00000597928 PFN2P35080 140 aa9.14□□□□□ -0.95
USHBP1-207ENST00000597928 CKS1BP61024 79 aa9.14□□□□□ -0.95
USHBP1-207ENST00000597928 RBMY1FQ15415 496 aaKnown RBP9.14□□□□□ -0.95
USHBP1-207ENST00000597928 MORN3Q6PF18 240 aaPredicted RBP9.14□□□□□ -0.95
USHBP1-207ENST00000597928 LINC00467Q9BRT7 94 aa9.14□□□□□ -0.95
USHBP1-207ENST00000597928 H3BUA1 57 aa9.13□□□□□ -0.95
USHBP1-207ENST00000597928 IGLV4-3A0A075B6K6 122 aa9.13□□□□□ -0.95
USHBP1-207ENST00000597928 ZNF22P17026 224 aaPredicted RBP9.13□□□□□ -0.95
USHBP1-207ENST00000597928 TAL2Q16559 108 aa9.13□□□□□ -0.95
USHBP1-207ENST00000597928 BBC3Q96PG8 261 aaPredicted RBP9.13□□□□□ -0.95
USHBP1-207ENST00000597928 TEP1Q99973 2627 aaKnown RBP9.13□□□□□ -0.95
USHBP1-207ENST00000597928 IGIPA6NJ69 53 aa9.13□□□□□ -0.95
USHBP1-207ENST00000597928 C2orf82Q6UX34 121 aa9.13□□□□□ -0.95
USHBP1-207ENST00000597928 Q6ZTI0 123 aa9.13□□□□□ -0.95
USHBP1-207ENST00000597928 ANKRD29Q8N6D5 301 aa9.13□□□□□ -0.95
USHBP1-207ENST00000597928 IGHV4-4A0A075B6R2 117 aa9.12□□□□□ -0.95
USHBP1-207ENST00000597928 K7EMT4 169 aa9.12□□□□□ -0.95
USHBP1-207ENST00000597928 CIRBPQ14011 172 aaKnown RBP9.12□□□□□ -0.95
USHBP1-207ENST00000597928 Q9H8V8 135 aa9.12□□□□□ -0.95
USHBP1-207ENST00000597928 CDKN2A-AS1Q9UH64 79 aa9.12□□□□□ -0.95
USHBP1-207ENST00000597928 ELANEP08246 267 aa9.12□□□□□ -0.95
USHBP1-207ENST00000597928 C10orf126Q8N4M7 172 aa9.12□□□□□ -0.95
USHBP1-207ENST00000597928 TRBV20-1A0A075B6N2 111 aa9.12□□□□□ -0.95
USHBP1-207ENST00000597928 H3BMM0 161 aa9.12□□□□□ -0.95
USHBP1-207ENST00000597928 CITED2Q99967 270 aaPredicted RBP9.12□□□□□ -0.95
USHBP1-207ENST00000597928 MT-ATP8P03928 68 aa9.11□□□□□ -0.95
USHBP1-207ENST00000597928 RPL13AP40429 203 aaKnown RBP9.11□□□□□ -0.95
USHBP1-207ENST00000597928 LINC00315P59091 139 aa9.11□□□□□ -0.95
USHBP1-207ENST00000597928 RPL36AP83881 106 aaKnown RBP9.11□□□□□ -0.95
USHBP1-207ENST00000597928 RPL36ALQ969Q0 106 aaKnown RBP9.11□□□□□ -0.95
USHBP1-207ENST00000597928 PF4P02776 101 aa9.11□□□□□ -0.95
USHBP1-207ENST00000597928 LINC00158P58513 81 aa9.11□□□□□ -0.95
USHBP1-207ENST00000597928 FOXI1Q12951 378 aa9.11□□□□□ -0.95
USHBP1-207ENST00000597928 MAP6D1Q9H9H5 199 aa9.11□□□□□ -0.95
USHBP1-207ENST00000597928 IGHV4-31P0DP07 118 aa9.1□□□□□ -0.95
USHBP1-207ENST00000597928 DSCR9P59020 149 aa9.1□□□□□ -0.95
USHBP1-207ENST00000597928 C3orf56Q8N813 242 aa9.1□□□□□ -0.95
USHBP1-207ENST00000597928 ZNF702PQ9H963 129 aa9.1□□□□□ -0.95
USHBP1-207ENST00000597928 SETXQ7Z333 2677 aaKnown RBP9.1□□□□□ -0.95
USHBP1-207ENST00000597928 LOC100131303A0A0U1RQF7 123 aa9.1□□□□□ -0.95
USHBP1-207ENST00000597928 CCL24O00175 119 aa9.09□□□□□ -0.95
USHBP1-207ENST00000597928 SNCGO76070 127 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms