RNA–Protein interactions for RNA: ENST00000596624.1

PNKP-208, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-208ENST00000596624 RGS21Q2M5E4 152 aa6.67□□□□□ -1.34
PNKP-208ENST00000596624 CENPWQ5EE01 88 aa6.67□□□□□ -1.34
PNKP-208ENST00000596624 OR2D3Q8NGH3 330 aa6.67□□□□□ -1.34
PNKP-208ENST00000596624 LINC01600Q96MT4 127 aa6.67□□□□□ -1.34
PNKP-208ENST00000596624 DPH3P1Q9H4G8 78 aa6.67□□□□□ -1.34
PNKP-208ENST00000596624 A0A1B0GV50 99 aa6.66□□□□□ -1.34
PNKP-208ENST00000596624 XKRY2A2RUG3 117 aa6.66□□□□□ -1.34
PNKP-208ENST00000596624 MGPP08493 103 aa6.66□□□□□ -1.34
PNKP-208ENST00000596624 NTF3P20783 257 aa6.66□□□□□ -1.34
PNKP-208ENST00000596624 RAB5CP51148 216 aa6.66□□□□□ -1.34
PNKP-208ENST00000596624 SSTP61278 116 aa6.66□□□□□ -1.34
PNKP-208ENST00000596624 CFAP161Q6P656 301 aa6.66□□□□□ -1.34
PNKP-208ENST00000596624 H7C423 109 aa6.65□□□□□ -1.34
PNKP-208ENST00000596624 RPS10P46783 165 aaKnown RBP6.65□□□□□ -1.34
PNKP-208ENST00000596624 COTL1Q14019 142 aa6.65□□□□□ -1.34
PNKP-208ENST00000596624 LYZL1Q6UWQ5 148 aa6.65□□□□□ -1.34
PNKP-208ENST00000596624 GNG13Q9P2W3 67 aa6.65□□□□□ -1.34
PNKP-208ENST00000596624 GVQW2A0A096LPI5 108 aaPredicted RBP6.64□□□□□ -1.35
PNKP-208ENST00000596624 KANTRA0A1W2PQU2 76 aa6.64□□□□□ -1.35
PNKP-208ENST00000596624 RAB19A4D1S5 217 aa6.64□□□□□ -1.35
PNKP-208ENST00000596624 PHOX2AO14813 284 aa6.64□□□□□ -1.35
PNKP-208ENST00000596624 PDE6DO43924 150 aa6.64□□□□□ -1.35
PNKP-208ENST00000596624 NDUFS6O75380 124 aaKnown RBP6.64□□□□□ -1.35
PNKP-208ENST00000596624 NCR2O95944 276 aa6.64□□□□□ -1.35
PNKP-208ENST00000596624 GATD1Q8NB37 220 aa6.64□□□□□ -1.35
PNKP-208ENST00000596624 BIN3Q9NQY0 253 aa6.64□□□□□ -1.35
PNKP-208ENST00000596624 GAGE12HA6NDE8 117 aa6.63□□□□□ -1.35
PNKP-208ENST00000596624 IFNA1P01562 189 aa6.63□□□□□ -1.35
PNKP-208ENST00000596624 AMTP48728 403 aa6.63□□□□□ -1.35
PNKP-208ENST00000596624 GNG4P50150 75 aa6.63□□□□□ -1.35
PNKP-208ENST00000596624 SULT1A2P50226 295 aa6.63□□□□□ -1.35
PNKP-208ENST00000596624 KRTAP10-8P60410 259 aa6.63□□□□□ -1.35
PNKP-208ENST00000596624 PRR3P79522 188 aaKnown RBP6.63□□□□□ -1.35
PNKP-208ENST00000596624 MEF2BQ02080 365 aaPredicted RBP6.63□□□□□ -1.35
PNKP-208ENST00000596624 COX6A2Q02221 97 aa6.63□□□□□ -1.35
PNKP-208ENST00000596624 NUDT10Q8NFP7 164 aa6.63□□□□□ -1.35
PNKP-208ENST00000596624 PRSS3P2Q8NHM4 247 aa6.63□□□□□ -1.35
PNKP-208ENST00000596624 NUDT11Q96G61 164 aa6.63□□□□□ -1.35
PNKP-208ENST00000596624 FAM210AQ96ND0 272 aa6.63□□□□□ -1.35
PNKP-208ENST00000596624 TPPP3Q9BW30 176 aa6.63□□□□□ -1.35
PNKP-208ENST00000596624 UBE2L6O14933 153 aa6.62□□□□□ -1.35
PNKP-208ENST00000596624 FOXI1Q12951 378 aa6.62□□□□□ -1.35
PNKP-208ENST00000596624 Q6ZNX1 250 aa6.62□□□□□ -1.35
PNKP-208ENST00000596624 C7orf33Q8WU49 177 aa6.62□□□□□ -1.35
PNKP-208ENST00000596624 CHCHD10Q8WYQ3 142 aaPredicted RBP6.62□□□□□ -1.35
PNKP-208ENST00000596624 TRBV6-5A0A0K0K1A5 114 aa6.61□□□□□ -1.35
PNKP-208ENST00000596624 FAM231BA6NCW3 169 aa6.61□□□□□ -1.35
PNKP-208ENST00000596624 ZNF25P17030 456 aaPredicted RBP6.61□□□□□ -1.35
PNKP-208ENST00000596624 SRSF9Q13242 221 aaKnown RBP eCLIP6.61□□□□□ -1.35
PNKP-208ENST00000596624 DPH3Q96FX2 82 aa6.61□□□□□ -1.35
PNKP-208ENST00000596624 A0A0J9YXV3 536 aa6.6□□□□□ -1.35
PNKP-208ENST00000596624 TEX46H3BTG2 121 aa6.6□□□□□ -1.35
PNKP-208ENST00000596624 BCL2P10415 239 aa6.6□□□□□ -1.35
PNKP-208ENST00000596624 ESDP10768 282 aa6.6□□□□□ -1.35
PNKP-208ENST00000596624 TAGLN2P37802 199 aaKnown RBP6.6□□□□□ -1.35
PNKP-208ENST00000596624 FOXA3P55318 350 aaPredicted RBP6.6□□□□□ -1.35
PNKP-208ENST00000596624 EIF5AL1Q6IS14 154 aaKnown RBP6.6□□□□□ -1.35
PNKP-208ENST00000596624 TEX261Q6UWH6 196 aa6.6□□□□□ -1.35
PNKP-208ENST00000596624 OR5A1Q8NGJ0 315 aa6.6□□□□□ -1.35
PNKP-208ENST00000596624 GTSF1Q8WW33 167 aa6.6□□□□□ -1.35
PNKP-208ENST00000596624 MED9Q9NWA0 146 aa6.6□□□□□ -1.35
PNKP-208ENST00000596624 LINC00474Q9P2X8 69 aa6.6□□□□□ -1.35
PNKP-208ENST00000596624 A0A096LNI7 61 aa6.59□□□□□ -1.35
PNKP-208ENST00000596624 TRAV26-2A0A0B4J265 109 aa6.59□□□□□ -1.35
PNKP-208ENST00000596624 K7EN84 100 aa6.59□□□□□ -1.35
PNKP-208ENST00000596624 FGF6P10767 208 aa6.59□□□□□ -1.35
PNKP-208ENST00000596624 TWIST1Q15672 202 aa6.59□□□□□ -1.35
PNKP-208ENST00000596624 MAJINQ3KP22 176 aa6.59□□□□□ -1.35
PNKP-208ENST00000596624 SPINK6Q6UWN8 80 aa6.59□□□□□ -1.35
PNKP-208ENST00000596624 STPG4Q8N801 248 aa6.59□□□□□ -1.35
PNKP-208ENST00000596624 OCC1Q8TAD7 63 aa6.59□□□□□ -1.35
PNKP-208ENST00000596624 RPL39LQ96EH5 51 aaKnown RBP6.59□□□□□ -1.35
PNKP-208ENST00000596624 RPP21Q9H633 154 aaKnown RBP6.59□□□□□ -1.35
PNKP-208ENST00000596624 RNF213Q63HN8 5207 aa6.58□□□□□ -1.36
PNKP-208ENST00000596624 SDHAF1A6NFY7 115 aa6.58□□□□□ -1.36
PNKP-208ENST00000596624 HIGD2BQ4VC39 106 aa6.58□□□□□ -1.36
PNKP-208ENST00000596624 PKIGQ9Y2B9 76 aa6.58□□□□□ -1.36
PNKP-208ENST00000596624 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.57□□□□□ -1.36
PNKP-208ENST00000596624 IGHV1-58A0A0C4DH39 117 aa6.57□□□□□ -1.36
PNKP-208ENST00000596624 LINC00959A0A1B0GUT2 108 aa6.57□□□□□ -1.36
PNKP-208ENST00000596624 IGKV2-29A2NJV5 120 aaPredicted RBP6.57□□□□□ -1.36
PNKP-208ENST00000596624 APCSP02743 223 aa6.57□□□□□ -1.36
PNKP-208ENST00000596624 AMMECR1LQ6DCA0 310 aa6.57□□□□□ -1.36
PNKP-208ENST00000596624 FAM231DQ6ZW35 169 aa6.57□□□□□ -1.36
PNKP-208ENST00000596624 MRPL52Q86TS9 123 aaKnown RBP6.57□□□□□ -1.36
PNKP-208ENST00000596624 RNASE7Q9H1E1 156 aaKnown RBP6.57□□□□□ -1.36
PNKP-208ENST00000596624 IGKV2-24A0A0C4DH68 120 aa6.56□□□□□ -1.36
PNKP-208ENST00000596624 I3L3M4 83 aa6.56□□□□□ -1.36
PNKP-208ENST00000596624 POLR2KP53803 58 aaKnown RBP6.56□□□□□ -1.36
PNKP-208ENST00000596624 CT83Q5H943 113 aa6.56□□□□□ -1.36
PNKP-208ENST00000596624 RNASEKQ6P5S7 137 aaKnown RBP6.56□□□□□ -1.36
PNKP-208ENST00000596624 CDC42SE2Q9NRR3 84 aa6.56□□□□□ -1.36
PNKP-208ENST00000596624 IGKV3OR2-268A0A0C4DH90 116 aa6.55□□□□□ -1.36
PNKP-208ENST00000596624 TRBV27A0A0K0K1C4 114 aa6.55□□□□□ -1.36
PNKP-208ENST00000596624 TMEM250H0YL14 139 aa6.55□□□□□ -1.36
PNKP-208ENST00000596624 TSHBP01222 138 aa6.55□□□□□ -1.36
PNKP-208ENST00000596624 CD164L2Q6UWJ8 174 aa6.55□□□□□ -1.36
PNKP-208ENST00000596624 Q6ZRP5 223 aa6.55□□□□□ -1.36
PNKP-208ENST00000596624 SLC51BQ86UW2 128 aa6.55□□□□□ -1.36
PNKP-208ENST00000596624 A8MWL6 223 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms