RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 GAGE12HA6NDE8 117 aa10.18□□□□□ -0.78
LIM2-202ENST00000596399 IFNA1P01562 189 aa10.18□□□□□ -0.78
LIM2-202ENST00000596399 AMTP48728 403 aa10.18□□□□□ -0.78
LIM2-202ENST00000596399 C15orf56Q8N910 161 aa10.18□□□□□ -0.78
LIM2-202ENST00000596399 DPH3P1Q9H4G8 78 aa10.18□□□□□ -0.78
LIM2-202ENST00000596399 AP5S1Q9NUS5 200 aa10.18□□□□□ -0.78
LIM2-202ENST00000596399 F2Z2F3 143 aa10.17□□□□□ -0.78
LIM2-202ENST00000596399 UBE2L6O14933 153 aa10.17□□□□□ -0.78
LIM2-202ENST00000596399 SULT1A2P50226 295 aa10.17□□□□□ -0.78
LIM2-202ENST00000596399 HIGD2BQ4VC39 106 aa10.17□□□□□ -0.78
LIM2-202ENST00000596399 Q6ZRU5 148 aa10.17□□□□□ -0.78
LIM2-202ENST00000596399 PGLYRP4Q96LB8 373 aa10.17□□□□□ -0.78
LIM2-202ENST00000596399 TNXBP22105 4242 aa10.17□□□□□ -0.78
LIM2-202ENST00000596399 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.16□□□□□ -0.78
LIM2-202ENST00000596399 PHOX2AO14813 284 aa10.16□□□□□ -0.78
LIM2-202ENST00000596399 TRGC1P0CF51 173 aa10.16□□□□□ -0.78
LIM2-202ENST00000596399 FOXA3P55318 350 aaPredicted RBP10.16□□□□□ -0.78
LIM2-202ENST00000596399 EIF5AP63241 154 aaKnown RBP10.16□□□□□ -0.78
LIM2-202ENST00000596399 MEF2BQ02080 365 aaPredicted RBP10.16□□□□□ -0.78
LIM2-202ENST00000596399 COX6A2Q02221 97 aa10.16□□□□□ -0.78
LIM2-202ENST00000596399 COTL1Q14019 142 aa10.16□□□□□ -0.78
LIM2-202ENST00000596399 C9orf62Q8N4C0 152 aa10.16□□□□□ -0.78
LIM2-202ENST00000596399 GATD1Q8NB37 220 aa10.16□□□□□ -0.78
LIM2-202ENST00000596399 NUDT10Q8NFP7 164 aa10.16□□□□□ -0.78
LIM2-202ENST00000596399 NUDT11Q96G61 164 aa10.16□□□□□ -0.78
LIM2-202ENST00000596399 MED9Q9NWA0 146 aa10.16□□□□□ -0.78
LIM2-202ENST00000596399 ODF1Q14990 250 aa10.15□□□□□ -0.78
LIM2-202ENST00000596399 TWIST1Q15672 202 aa10.15□□□□□ -0.78
LIM2-202ENST00000596399 PRSS3P2Q8NHM4 247 aa10.15□□□□□ -0.78
LIM2-202ENST00000596399 RPL39LQ96EH5 51 aaKnown RBP10.15□□□□□ -0.78
LIM2-202ENST00000596399 XKRY2A2RUG3 117 aa10.14□□□□□ -0.79
LIM2-202ENST00000596399 CTRLP40313 264 aa10.14□□□□□ -0.79
LIM2-202ENST00000596399 WDR73Q6P4I2 378 aa10.14□□□□□ -0.79
LIM2-202ENST00000596399 Q6ZNX1 250 aa10.14□□□□□ -0.79
LIM2-202ENST00000596399 RNASE7Q9H1E1 156 aaKnown RBP10.14□□□□□ -0.79
LIM2-202ENST00000596399 PLAC8Q9NZF1 115 aa10.14□□□□□ -0.79
LIM2-202ENST00000596399 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.13□□□□□ -0.79
LIM2-202ENST00000596399 IGKV2-24A0A0C4DH68 120 aa10.13□□□□□ -0.79
LIM2-202ENST00000596399 IGKV2-29A2NJV5 120 aaPredicted RBP10.13□□□□□ -0.79
LIM2-202ENST00000596399 K7EN84 100 aa10.13□□□□□ -0.79
LIM2-202ENST00000596399 PDE6DO43924 150 aa10.13□□□□□ -0.79
LIM2-202ENST00000596399 SMIM12Q96EX1 92 aa10.13□□□□□ -0.79
LIM2-202ENST00000596399 RNF185Q96GF1 192 aa10.13□□□□□ -0.79
LIM2-202ENST00000596399 LRP2P98164 4655 aa10.13□□□□□ -0.79
LIM2-202ENST00000596399 BCL2P10415 239 aa10.12□□□□□ -0.79
LIM2-202ENST00000596399 MAJINQ3KP22 176 aa10.12□□□□□ -0.79
LIM2-202ENST00000596399 CHCHD10Q8WYQ3 142 aaPredicted RBP10.12□□□□□ -0.79
LIM2-202ENST00000596399 RPS10P46783 165 aaKnown RBP10.11□□□□□ -0.79
LIM2-202ENST00000596399 LYPD6BQ8NI32 183 aa10.11□□□□□ -0.79
LIM2-202ENST00000596399 GTSF1Q8WW33 167 aa10.11□□□□□ -0.79
LIM2-202ENST00000596399 RPP21Q9H633 154 aaKnown RBP10.11□□□□□ -0.79
LIM2-202ENST00000596399 TEX46H3BTG2 121 aa10.1□□□□□ -0.79
LIM2-202ENST00000596399 AMMECR1LQ6DCA0 310 aa10.1□□□□□ -0.79
LIM2-202ENST00000596399 RNASEKQ6P5S7 137 aaKnown RBP10.1□□□□□ -0.79
LIM2-202ENST00000596399 OCC1Q8TAD7 63 aa10.1□□□□□ -0.79
LIM2-202ENST00000596399 LINC00526Q96FQ7 95 aa10.1□□□□□ -0.79
LIM2-202ENST00000596399 CNFNQ9BYD5 112 aa10.1□□□□□ -0.79
LIM2-202ENST00000596399 NDUFS6O75380 124 aaKnown RBP10.09□□□□□ -0.79
LIM2-202ENST00000596399 GAS8-AS1O95177 125 aa10.09□□□□□ -0.79
LIM2-202ENST00000596399 CFAP161Q6P656 301 aa10.09□□□□□ -0.79
LIM2-202ENST00000596399 STPG4Q8N801 248 aa10.09□□□□□ -0.79
LIM2-202ENST00000596399 C7orf33Q8WU49 177 aa10.09□□□□□ -0.79
LIM2-202ENST00000596399 BIN3Q9NQY0 253 aa10.09□□□□□ -0.79
LIM2-202ENST00000596399 A0A096LNI7 61 aa10.08□□□□□ -0.8
LIM2-202ENST00000596399 FGF6P10767 208 aa10.08□□□□□ -0.8
LIM2-202ENST00000596399 FOXI1Q12951 378 aa10.08□□□□□ -0.8
LIM2-202ENST00000596399 GVQW2A0A096LPI5 108 aaPredicted RBP10.07□□□□□ -0.8
LIM2-202ENST00000596399 SDHAF1A6NFY7 115 aa10.07□□□□□ -0.8
LIM2-202ENST00000596399 PRR3P79522 188 aaKnown RBP10.07□□□□□ -0.8
LIM2-202ENST00000596399 EIF5AL1Q6IS14 154 aaKnown RBP10.07□□□□□ -0.8
LIM2-202ENST00000596399 FAM231BA6NCW3 169 aa10.06□□□□□ -0.8
LIM2-202ENST00000596399 APCSP02743 223 aa10.06□□□□□ -0.8
LIM2-202ENST00000596399 XCL1P47992 114 aa10.06□□□□□ -0.8
LIM2-202ENST00000596399 NCR2O95944 276 aa10.04□□□□□ -0.8
LIM2-202ENST00000596399 LINC01600Q96MT4 127 aa10.04□□□□□ -0.8
LIM2-202ENST00000596399 LINC00959A0A1B0GUT2 108 aa10.03□□□□□ -0.8
LIM2-202ENST00000596399 H7C423 109 aa10.03□□□□□ -0.8
LIM2-202ENST00000596399 CCL25O15444 150 aa10.03□□□□□ -0.8
LIM2-202ENST00000596399 GATCO43716 136 aaKnown RBP10.03□□□□□ -0.8
LIM2-202ENST00000596399 TSHBP01222 138 aa10.03□□□□□ -0.8
LIM2-202ENST00000596399 PMCHP20382 165 aa10.03□□□□□ -0.8
LIM2-202ENST00000596399 OR5A1Q8NGJ0 315 aa10.03□□□□□ -0.8
LIM2-202ENST00000596399 I3L3M4 83 aa10.02□□□□□ -0.81
LIM2-202ENST00000596399 SMIM15Q7Z3B0 74 aa10.02□□□□□ -0.81
LIM2-202ENST00000596399 SLC51BQ86UW2 128 aa10.02□□□□□ -0.81
LIM2-202ENST00000596399 TMEM242Q9NWH2 141 aa10.02□□□□□ -0.81
LIM2-202ENST00000596399 ESDP10768 282 aa10.01□□□□□ -0.81
LIM2-202ENST00000596399 ZNF25P17030 456 aaPredicted RBP10□□□□□ -0.81
LIM2-202ENST00000596399 TEX261Q6UWH6 196 aa10□□□□□ -0.81
LIM2-202ENST00000596399 TMEM101Q96IK0 257 aa10□□□□□ -0.81
LIM2-202ENST00000596399 IGHV1-58A0A0C4DH39 117 aa9.99□□□□□ -0.81
LIM2-202ENST00000596399 TRBV6-5A0A0K0K1A5 114 aa9.99□□□□□ -0.81
LIM2-202ENST00000596399 CEBPGP53567 150 aa9.99□□□□□ -0.81
LIM2-202ENST00000596399 TCTE3Q8IZS6 198 aa9.99□□□□□ -0.81
LIM2-202ENST00000596399 BTF3L4Q96K17 158 aa9.99□□□□□ -0.81
LIM2-202ENST00000596399 CARD19Q96LW7 228 aa9.99□□□□□ -0.81
LIM2-202ENST00000596399 A8MWL6 223 aa9.98□□□□□ -0.81
LIM2-202ENST00000596399 TAGLN2P37802 199 aaKnown RBP9.98□□□□□ -0.81
LIM2-202ENST00000596399 FAM231DQ6ZW35 169 aa9.98□□□□□ -0.81
LIM2-202ENST00000596399 ST20Q9HBF5 79 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms