RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 RNASE13Q5GAN3 156 aaKnown RBP11.27□□□□□ -0.61
ZNF541-205ENST00000595558 PRO1854Q9UHT4 67 aa11.27□□□□□ -0.61
ZNF541-205ENST00000595558 GCN1Q92616 2671 aaKnown RBP11.27□□□□□ -0.61
ZNF541-205ENST00000595558 IGHV1OR15-1A0A075B7D0 117 aa11.26□□□□□ -0.61
ZNF541-205ENST00000595558 RBMY1A1P0DJD3 496 aaKnown RBP11.26□□□□□ -0.61
ZNF541-205ENST00000595558 RBMY1CP0DJD4 496 aa11.26□□□□□ -0.61
ZNF541-205ENST00000595558 ZNF22P17026 224 aaPredicted RBP11.26□□□□□ -0.61
ZNF541-205ENST00000595558 RBMY1FQ15415 496 aaKnown RBP11.26□□□□□ -0.61
ZNF541-205ENST00000595558 Q5PR19 223 aa11.26□□□□□ -0.61
ZNF541-205ENST00000595558 TRPT1Q86TN4 253 aaKnown RBP11.26□□□□□ -0.61
ZNF541-205ENST00000595558 SLURP1P55000 103 aa11.26□□□□□ -0.61
ZNF541-205ENST00000595558 C20orf203Q8NBC4 194 aa11.26□□□□□ -0.61
ZNF541-205ENST00000595558 Q96MF0 132 aa11.26□□□□□ -0.61
ZNF541-205ENST00000595558 ELANEP08246 267 aa11.25□□□□□ -0.61
ZNF541-205ENST00000595558 NSUN5P1Q3KNT7 163 aa11.25□□□□□ -0.61
ZNF541-205ENST00000595558 MUSTN1Q8IVN3 82 aa11.25□□□□□ -0.61
ZNF541-205ENST00000595558 ATP6V0E2Q8NHE4 81 aa11.25□□□□□ -0.61
ZNF541-205ENST00000595558 IGLV4-3A0A075B6K6 122 aa11.25□□□□□ -0.61
ZNF541-205ENST00000595558 K7EQG2 157 aa11.25□□□□□ -0.61
ZNF541-205ENST00000595558 CIDEAO60543 219 aa11.25□□□□□ -0.61
ZNF541-205ENST00000595558 XGP55808 180 aa11.25□□□□□ -0.61
ZNF541-205ENST00000595558 RHODO00212 210 aa11.24□□□□□ -0.61
ZNF541-205ENST00000595558 KHDC1LQ5JSQ8 128 aa11.24□□□□□ -0.61
ZNF541-205ENST00000595558 TEN1Q86WV5 123 aa11.24□□□□□ -0.61
ZNF541-205ENST00000595558 FAM104AQ969W3 186 aa11.24□□□□□ -0.61
ZNF541-205ENST00000595558 ZNF702PQ9H963 129 aa11.24□□□□□ -0.61
ZNF541-205ENST00000595558 NBEAL2Q6ZNJ1 2754 aa11.24□□□□□ -0.61
ZNF541-205ENST00000595558 HOXD3P31249 432 aaPredicted RBP11.24□□□□□ -0.61
ZNF541-205ENST00000595558 SNRPD3P62318 126 aaKnown RBP11.24□□□□□ -0.61
ZNF541-205ENST00000595558 ANKRD29Q8N6D5 301 aa11.24□□□□□ -0.61
ZNF541-205ENST00000595558 SPXQ9BT56 116 aa11.24□□□□□ -0.61
ZNF541-205ENST00000595558 LEPROTO15243 131 aa11.23□□□□□ -0.61
ZNF541-205ENST00000595558 FN1P02751 2386 aaKnown RBP11.23□□□□□ -0.61
ZNF541-205ENST00000595558 KNCNA6PVL3 124 aa11.23□□□□□ -0.61
ZNF541-205ENST00000595558 TMEM263Q8WUH6 116 aaKnown RBP11.23□□□□□ -0.61
ZNF541-205ENST00000595558 VPREB3Q9UKI3 123 aa11.23□□□□□ -0.61
ZNF541-205ENST00000595558 VWFP04275 2813 aa11.23□□□□□ -0.61
ZNF541-205ENST00000595558 TRAV8-3A0A0A6YYJ7 113 aa11.22□□□□□ -0.61
ZNF541-205ENST00000595558 A8MZ25 164 aa11.22□□□□□ -0.61
ZNF541-205ENST00000595558 I3L3M4 83 aa11.22□□□□□ -0.61
ZNF541-205ENST00000595558 IGHV3-33P01772 117 aa11.22□□□□□ -0.61
ZNF541-205ENST00000595558 SPINK8P0C7L1 97 aa11.22□□□□□ -0.61
ZNF541-205ENST00000595558 CKS1BP61024 79 aa11.22□□□□□ -0.61
ZNF541-205ENST00000595558 RHOHQ15669 191 aa11.22□□□□□ -0.61
ZNF541-205ENST00000595558 WFDC11Q8NEX6 87 aa11.22□□□□□ -0.61
ZNF541-205ENST00000595558 PPDPFLQ8WWR9 84 aa11.22□□□□□ -0.61
ZNF541-205ENST00000595558 VCX2Q9H322 139 aa11.22□□□□□ -0.61
ZNF541-205ENST00000595558 A8MWV9 139 aa11.22□□□□□ -0.61
ZNF541-205ENST00000595558 Q6ZUT4 128 aa11.22□□□□□ -0.61
ZNF541-205ENST00000595558 SBSPONQ8IVN8 264 aa11.22□□□□□ -0.61
ZNF541-205ENST00000595558 HIVEP2P31629 2446 aa11.21□□□□□ -0.61
ZNF541-205ENST00000595558 Q6YL49 198 aa11.21□□□□□ -0.61
ZNF541-205ENST00000595558 TRBV20-1A0A075B6N2 111 aa11.21□□□□□ -0.62
ZNF541-205ENST00000595558 C9JAW5 83 aa11.21□□□□□ -0.62
ZNF541-205ENST00000595558 ODF3Q96PU9 254 aa11.21□□□□□ -0.62
ZNF541-205ENST00000595558 GATA3P23771 443 aa11.2□□□□□ -0.62
ZNF541-205ENST00000595558 DSCR9P59020 149 aa11.2□□□□□ -0.62
ZNF541-205ENST00000595558 Q6ZSN1 163 aa11.2□□□□□ -0.62
ZNF541-205ENST00000595558 OTOGQ6ZRI0 2925 aa11.2□□□□□ -0.62
ZNF541-205ENST00000595558 A0A0J9YXY3 114 aa11.2□□□□□ -0.62
ZNF541-205ENST00000595558 A0A1B0GV72 72 aa11.2□□□□□ -0.62
ZNF541-205ENST00000595558 IGHV3-30-3P0DP02 117 aa11.2□□□□□ -0.62
ZNF541-205ENST00000595558 CRYBA4P53673 196 aa11.2□□□□□ -0.62
ZNF541-205ENST00000595558 TCTEX1D4Q5JR98 221 aa11.2□□□□□ -0.62
ZNF541-205ENST00000595558 LYRM7Q5U5X0 104 aa11.2□□□□□ -0.62
ZNF541-205ENST00000595558 DEFB113Q30KQ7 82 aa11.19□□□□□ -0.62
ZNF541-205ENST00000595558 A0A1W2PRX2 142 aa11.19□□□□□ -0.62
ZNF541-205ENST00000595558 SLC25A20O43772 301 aa11.19□□□□□ -0.62
ZNF541-205ENST00000595558 CD28P10747 220 aa11.19□□□□□ -0.62
ZNF541-205ENST00000595558 NPC2P61916 151 aa11.19□□□□□ -0.62
ZNF541-205ENST00000595558 ADAMTSL4-AS1Q5T5F5 129 aa11.19□□□□□ -0.62
ZNF541-205ENST00000595558 Q6ZSV7 163 aa11.19□□□□□ -0.62
ZNF541-205ENST00000595558 ERG28Q9UKR5 140 aa11.19□□□□□ -0.62
ZNF541-205ENST00000595558 M0R2P5 195 aa11.18□□□□□ -0.62
ZNF541-205ENST00000595558 KRTAP1-3Q8IUG1 177 aa11.18□□□□□ -0.62
ZNF541-205ENST00000595558 Q1RN00 199 aa11.17□□□□□ -0.62
ZNF541-205ENST00000595558 LITAFQ99732 161 aa11.17□□□□□ -0.62
ZNF541-205ENST00000595558 PRSS2P07478 247 aa11.16□□□□□ -0.62
ZNF541-205ENST00000595558 ANK3Q12955 4377 aaKnown RBP11.16□□□□□ -0.62
ZNF541-205ENST00000595558 RBMY1BA6NDE4 496 aaKnown RBP11.16□□□□□ -0.62
ZNF541-205ENST00000595558 RBMY1EA6NEQ0 496 aaKnown RBP11.16□□□□□ -0.62
ZNF541-205ENST00000595558 RBMY1DP0C7P1 496 aaKnown RBP11.16□□□□□ -0.62
ZNF541-205ENST00000595558 TIMM21Q9BVV7 248 aa11.16□□□□□ -0.62
ZNF541-205ENST00000595558 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.15□□□□□ -0.62
ZNF541-205ENST00000595558 IGHV3-38A0A0C4DH36 116 aa11.15□□□□□ -0.62
ZNF541-205ENST00000595558 IGKV2-29A2NJV5 120 aaPredicted RBP11.15□□□□□ -0.62
ZNF541-205ENST00000595558 FSHBP01225 129 aa11.15□□□□□ -0.62
ZNF541-205ENST00000595558 DEFB131AP59861 70 aa11.15□□□□□ -0.62
ZNF541-205ENST00000595558 GEMIN7Q9H840 131 aaKnown RBP11.15□□□□□ -0.62
ZNF541-205ENST00000595558 A0A0B4J2C4 111 aa11.15□□□□□ -0.62
ZNF541-205ENST00000595558 TRGV11A0A075B6L2 103 aa11.14□□□□□ -0.63
ZNF541-205ENST00000595558 CLUHP3Q96NS8 147 aa11.14□□□□□ -0.63
ZNF541-205ENST00000595558 TRAV26-1A0A087WT03 109 aa11.14□□□□□ -0.63
ZNF541-205ENST00000595558 TRIAP1O43715 76 aa11.14□□□□□ -0.63
ZNF541-205ENST00000595558 MRPS36P82909 103 aaKnown RBP11.14□□□□□ -0.63
ZNF541-205ENST00000595558 TMEM61Q8N0U2 210 aa11.13□□□□□ -0.63
ZNF541-205ENST00000595558 J3QLI3 93 aa11.13□□□□□ -0.63
ZNF541-205ENST00000595558 NTN5Q8WTR8 489 aaPredicted RBP11.13□□□□□ -0.63
ZNF541-205ENST00000595558 TENM1Q9UKZ4 2725 aa11.13□□□□□ -0.63
ZNF541-205ENST00000595558 DAND5Q8N907 189 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms