RNA–Protein interactions for RNA: ENST00000595235.5

SSX4B-201, Transcript of SSX family member 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX4B, Length 1,221 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-201ENST00000595235 TMEM97Q5BJF2 176 aa3.83□□□□□ -1.8
SSX4B-201ENST00000595235 WDR73Q6P4I2 378 aa3.83□□□□□ -1.8
SSX4B-201ENST00000595235 RASL11AQ6T310 242 aa3.83□□□□□ -1.8
SSX4B-201ENST00000595235 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.83□□□□□ -1.8
SSX4B-201ENST00000595235 GATD1Q8NB37 220 aa3.83□□□□□ -1.8
SSX4B-201ENST00000595235 FRZBQ92765 325 aa3.83□□□□□ -1.8
SSX4B-201ENST00000595235 C1orf43Q9BWL3 253 aa3.83□□□□□ -1.8
SSX4B-201ENST00000595235 PRR34Q9NV39 138 aa3.83□□□□□ -1.8
SSX4B-201ENST00000595235 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.83□□□□□ -1.8
SSX4B-201ENST00000595235 IGLV4-60A0A075B6I1 120 aa3.82□□□□□ -1.8
SSX4B-201ENST00000595235 GATCO43716 136 aaKnown RBP3.82□□□□□ -1.8
SSX4B-201ENST00000595235 HLA-DQA1P01909 254 aa3.82□□□□□ -1.8
SSX4B-201ENST00000595235 SRP19P09132 144 aaKnown RBP3.82□□□□□ -1.8
SSX4B-201ENST00000595235 KRTAP26-1Q6PEX3 210 aa3.82□□□□□ -1.8
SSX4B-201ENST00000595235 FAM231DQ6ZW35 169 aa3.82□□□□□ -1.8
SSX4B-201ENST00000595235 LINC01551Q86U37 167 aa3.82□□□□□ -1.8
SSX4B-201ENST00000595235 LINC00269Q8N2A0 174 aa3.82□□□□□ -1.8
SSX4B-201ENST00000595235 C20orf203Q8NBC4 194 aa3.82□□□□□ -1.8
SSX4B-201ENST00000595235 RPL39LQ96EH5 51 aaKnown RBP3.82□□□□□ -1.8
SSX4B-201ENST00000595235 FAM210AQ96ND0 272 aa3.82□□□□□ -1.8
SSX4B-201ENST00000595235 EIF5A2Q9GZV4 153 aaKnown RBP3.82□□□□□ -1.8
SSX4B-201ENST00000595235 GFRA4Q9GZZ7 299 aa3.82□□□□□ -1.8
SSX4B-201ENST00000595235 NIT2Q9NQR4 276 aa3.82□□□□□ -1.8
SSX4B-201ENST00000595235 USP17L23D6RBM5 183 aa3.81□□□□□ -1.8
SSX4B-201ENST00000595235 GAS8-AS1O95177 125 aa3.81□□□□□ -1.8
SSX4B-201ENST00000595235 INAFM2P0DMQ5 153 aa3.81□□□□□ -1.8
SSX4B-201ENST00000595235 PKIAP61925 76 aa3.81□□□□□ -1.8
SSX4B-201ENST00000595235 REG3AQ06141 175 aa3.81□□□□□ -1.8
SSX4B-201ENST00000595235 MIAQ16674 131 aa3.81□□□□□ -1.8
SSX4B-201ENST00000595235 PGLYRP4Q96LB8 373 aa3.81□□□□□ -1.8
SSX4B-201ENST00000595235 SMIM7Q9BQ49 75 aa3.81□□□□□ -1.8
SSX4B-201ENST00000595235 TMEM243Q9BU79 118 aa3.81□□□□□ -1.8
SSX4B-201ENST00000595235 IGLV10-54A0A075B6I4 117 aa3.8□□□□□ -1.8
SSX4B-201ENST00000595235 ZNF727A8MUV8 499 aa3.8□□□□□ -1.8
SSX4B-201ENST00000595235 A8MWL6 223 aa3.8□□□□□ -1.8
SSX4B-201ENST00000595235 C9JQL5 133 aa3.8□□□□□ -1.8
SSX4B-201ENST00000595235 NDUFS6O75380 124 aaKnown RBP3.8□□□□□ -1.8
SSX4B-201ENST00000595235 PRSS1P07477 247 aa3.8□□□□□ -1.8
SSX4B-201ENST00000595235 AMTP48728 403 aa3.8□□□□□ -1.8
SSX4B-201ENST00000595235 COTL1Q14019 142 aa3.8□□□□□ -1.8
SSX4B-201ENST00000595235 CT83Q5H943 113 aa3.8□□□□□ -1.8
SSX4B-201ENST00000595235 SCXQ7RTU7 201 aa3.8□□□□□ -1.8
SSX4B-201ENST00000595235 V9GYV3 84 aa3.8□□□□□ -1.8
SSX4B-201ENST00000595235 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.79□□□□□ -1.8
SSX4B-201ENST00000595235 A0A1B0GUV1 79 aa3.79□□□□□ -1.8
SSX4B-201ENST00000595235 IGKV2-29A2NJV5 120 aaPredicted RBP3.79□□□□□ -1.8
SSX4B-201ENST00000595235 HIGD1CA8MV81 97 aa3.79□□□□□ -1.8
SSX4B-201ENST00000595235 UBE2L6O14933 153 aa3.79□□□□□ -1.8
SSX4B-201ENST00000595235 SRSF3P84103 164 aaKnown RBP3.79□□□□□ -1.8
SSX4B-201ENST00000595235 C14orf177Q52M58 125 aa3.79□□□□□ -1.8
SSX4B-201ENST00000595235 TSKUQ8WUA8 353 aa3.79□□□□□ -1.8
SSX4B-201ENST00000595235 ISOC2Q96AB3 205 aa3.79□□□□□ -1.8
SSX4B-201ENST00000595235 RNF185Q96GF1 192 aa3.79□□□□□ -1.8
SSX4B-201ENST00000595235 OSTCQ9NRP0 149 aa3.79□□□□□ -1.8
SSX4B-201ENST00000595235 A0A1B0GUT8 65 aa3.78□□□□□ -1.8
SSX4B-201ENST00000595235 SDHAF1A6NFY7 115 aa3.78□□□□□ -1.8
SSX4B-201ENST00000595235 NCR2O95944 276 aa3.78□□□□□ -1.8
SSX4B-201ENST00000595235 RPS10P46783 165 aaKnown RBP3.78□□□□□ -1.8
SSX4B-201ENST00000595235 RPL23P62829 140 aaKnown RBP3.78□□□□□ -1.8
SSX4B-201ENST00000595235 TEX261Q6UWH6 196 aa3.78□□□□□ -1.8
SSX4B-201ENST00000595235 SMIM15Q7Z3B0 74 aa3.78□□□□□ -1.8
SSX4B-201ENST00000595235 AMN1Q8IY45 258 aa3.78□□□□□ -1.8
SSX4B-201ENST00000595235 CIRBP-AS1Q8TBR5 109 aa3.78□□□□□ -1.8
SSX4B-201ENST00000595235 BORCS7Q96B45 105 aa3.78□□□□□ -1.8
SSX4B-201ENST00000595235 CHAC1Q9BUX1 264 aa3.78□□□□□ -1.8
SSX4B-201ENST00000595235 TMEM242Q9NWH2 141 aa3.78□□□□□ -1.8
SSX4B-201ENST00000595235 TRAV8-4A0A0B4J246 113 aa3.77□□□□□ -1.81
SSX4B-201ENST00000595235 IGKV3OR2-268A0A0C4DH90 116 aa3.77□□□□□ -1.81
SSX4B-201ENST00000595235 TRBV6-5A0A0K0K1A5 114 aa3.77□□□□□ -1.81
SSX4B-201ENST00000595235 FAM231BA6NCW3 169 aa3.77□□□□□ -1.81
SSX4B-201ENST00000595235 GAGE12HA6NDE8 117 aa3.77□□□□□ -1.81
SSX4B-201ENST00000595235 SMKR1H3BMG3 65 aa3.77□□□□□ -1.81
SSX4B-201ENST00000595235 PANO1I0J062 215 aa3.77□□□□□ -1.81
SSX4B-201ENST00000595235 TSHBP01222 138 aa3.77□□□□□ -1.81
SSX4B-201ENST00000595235 APCSP02743 223 aa3.77□□□□□ -1.81
SSX4B-201ENST00000595235 FGF6P10767 208 aa3.77□□□□□ -1.81
SSX4B-201ENST00000595235 RAB4AP20338 218 aa3.77□□□□□ -1.81
SSX4B-201ENST00000595235 KRTAP10-4P60372 401 aaPredicted RBP3.77□□□□□ -1.81
SSX4B-201ENST00000595235 ADIRFQ15847 76 aa3.77□□□□□ -1.81
SSX4B-201ENST00000595235 TMEM241Q24JQ0 296 aa3.77□□□□□ -1.81
SSX4B-201ENST00000595235 RNASEKQ6P5S7 137 aaKnown RBP3.77□□□□□ -1.81
SSX4B-201ENST00000595235 C9orf163Q8N9P6 203 aa3.77□□□□□ -1.81
SSX4B-201ENST00000595235 NUP35Q8NFH5 326 aa3.77□□□□□ -1.81
SSX4B-201ENST00000595235 TMEM191AQ9H0A3 160 aa3.77□□□□□ -1.81
SSX4B-201ENST00000595235 NAT8Q9UHE5 227 aa3.77□□□□□ -1.81
SSX4B-201ENST00000595235 VPS13BQ7Z7G8 4022 aa3.77□□□□□ -1.81
SSX4B-201ENST00000595235 hDV102S1A0JD36 115 aa3.76□□□□□ -1.81
SSX4B-201ENST00000595235 H7C423 109 aa3.76□□□□□ -1.81
SSX4B-201ENST00000595235 I3L3M4 83 aa3.76□□□□□ -1.81
SSX4B-201ENST00000595235 SLPIP03973 132 aa3.76□□□□□ -1.81
SSX4B-201ENST00000595235 PLA2G1BP04054 148 aaKnown RBP3.76□□□□□ -1.81
SSX4B-201ENST00000595235 ESDP10768 282 aa3.76□□□□□ -1.81
SSX4B-201ENST00000595235 PMCHP20382 165 aa3.76□□□□□ -1.81
SSX4B-201ENST00000595235 POLR2KP53803 58 aaKnown RBP3.76□□□□□ -1.81
SSX4B-201ENST00000595235 RIGQ13278 110 aa3.76□□□□□ -1.81
SSX4B-201ENST00000595235 PEA15Q15121 130 aa3.76□□□□□ -1.81
SSX4B-201ENST00000595235 FAM74A3Q4VXF1 159 aa3.76□□□□□ -1.81
SSX4B-201ENST00000595235 AMMECR1LQ6DCA0 310 aa3.76□□□□□ -1.81
SSX4B-201ENST00000595235 DGAT2L7PQ6IED9 249 aa3.76□□□□□ -1.81
SSX4B-201ENST00000595235 C15orf56Q8N910 161 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms