RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 HHLA3Q9XRX5 114 aa9.48□□□□□ -0.89
VRK3-205ENST00000593919 IGKV2D-26A0A0A0MRZ7 120 aa9.47□□□□□ -0.89
VRK3-205ENST00000593919 TRGV1A0A0A0MS02 117 aa9.47□□□□□ -0.89
VRK3-205ENST00000593919 DAZ2Q13117 558 aaKnown RBP9.47□□□□□ -0.89
VRK3-205ENST00000593919 ZC2HC1BQ5TFG8 222 aa9.47□□□□□ -0.89
VRK3-205ENST00000593919 COX11Q9Y6N1 276 aa9.47□□□□□ -0.89
VRK3-205ENST00000593919 A8MWV9 139 aa9.46□□□□□ -0.89
VRK3-205ENST00000593919 Q6ZTI0 123 aa9.46□□□□□ -0.89
VRK3-205ENST00000593919 DNHD1Q96M86 4753 aa9.46□□□□□ -0.9
VRK3-205ENST00000593919 PRB2P02812 416 aaPredicted RBP9.46□□□□□ -0.9
VRK3-205ENST00000593919 CFAP126Q5VTH2 177 aa9.46□□□□□ -0.9
VRK3-205ENST00000593919 OR11H2Q8NH07 326 aa9.46□□□□□ -0.9
VRK3-205ENST00000593919 TTTY13Q9BZ97 58 aa9.46□□□□□ -0.9
VRK3-205ENST00000593919 SDHAF1A6NFY7 115 aa9.45□□□□□ -0.9
VRK3-205ENST00000593919 SMIM9A6NGZ8 99 aa9.45□□□□□ -0.9
VRK3-205ENST00000593919 H7C1H1 209 aa9.45□□□□□ -0.9
VRK3-205ENST00000593919 POLR2KP53803 58 aaKnown RBP9.45□□□□□ -0.9
VRK3-205ENST00000593919 EMP1P54849 157 aa9.45□□□□□ -0.9
VRK3-205ENST00000593919 RPL32P62910 135 aaKnown RBP9.45□□□□□ -0.9
VRK3-205ENST00000593919 TMEM97Q5BJF2 176 aa9.45□□□□□ -0.9
VRK3-205ENST00000593919 IGHV3-73A0A0B4J1V6 119 aa9.44□□□□□ -0.9
VRK3-205ENST00000593919 TRAV12-1A0A0B4J245 112 aa9.44□□□□□ -0.9
VRK3-205ENST00000593919 PLNP26678 52 aa9.44□□□□□ -0.9
VRK3-205ENST00000593919 UFSP1Q6NVU6 142 aa9.44□□□□□ -0.9
VRK3-205ENST00000593919 BAALCQ8WXS3 180 aa9.44□□□□□ -0.9
VRK3-205ENST00000593919 RNF183Q96D59 192 aa9.44□□□□□ -0.9
VRK3-205ENST00000593919 KIR2DL4Q99706 377 aa9.44□□□□□ -0.9
VRK3-205ENST00000593919 OVOL2Q9BRP0 275 aa9.44□□□□□ -0.9
VRK3-205ENST00000593919 TENM3Q9P273 2699 aa9.44□□□□□ -0.9
VRK3-205ENST00000593919 F8VRH5 84 aa9.44□□□□□ -0.9
VRK3-205ENST00000593919 VCYO14598 125 aa9.44□□□□□ -0.9
VRK3-205ENST00000593919 KPRPQ5T749 579 aaPredicted RBP9.44□□□□□ -0.9
VRK3-205ENST00000593919 ZFP2Q6ZN57 461 aa9.44□□□□□ -0.9
VRK3-205ENST00000593919 ERASQ7Z444 233 aa9.44□□□□□ -0.9
VRK3-205ENST00000593919 NEXN-AS1Q8NBZ9 246 aa9.44□□□□□ -0.9
VRK3-205ENST00000593919 CYSLTR1Q9Y271 337 aa9.44□□□□□ -0.9
VRK3-205ENST00000593919 TP53TG1Q9Y2A0 90 aa9.44□□□□□ -0.9
VRK3-205ENST00000593919 M0QY20 66 aa9.43□□□□□ -0.9
VRK3-205ENST00000593919 TAX1BP3O14907 124 aa9.43□□□□□ -0.9
VRK3-205ENST00000593919 SIVA1O15304 175 aa9.43□□□□□ -0.9
VRK3-205ENST00000593919 RS1O15537 224 aa9.43□□□□□ -0.9
VRK3-205ENST00000593919 MALP21145 153 aa9.43□□□□□ -0.9
VRK3-205ENST00000593919 TRBV6-5A0A0K0K1A5 114 aa9.43□□□□□ -0.9
VRK3-205ENST00000593919 GAGE12BA1L429 117 aa9.43□□□□□ -0.9
VRK3-205ENST00000593919 GAGE7O76087 117 aa9.43□□□□□ -0.9
VRK3-205ENST00000593919 GAGE12FP0CL80 117 aa9.43□□□□□ -0.9
VRK3-205ENST00000593919 GAGE12GP0CL81 117 aa9.43□□□□□ -0.9
VRK3-205ENST00000593919 GAGE12IP0CL82 117 aa9.43□□□□□ -0.9
VRK3-205ENST00000593919 RPL39P62891 51 aaKnown RBP9.43□□□□□ -0.9
VRK3-205ENST00000593919 RHODO00212 210 aa9.42□□□□□ -0.9
VRK3-205ENST00000593919 HSD52Q0P140 79 aa9.42□□□□□ -0.9
VRK3-205ENST00000593919 Q8NAQ8 132 aa9.42□□□□□ -0.9
VRK3-205ENST00000593919 IGHV4-28A0A0C4DH34 117 aa9.41□□□□□ -0.9
VRK3-205ENST00000593919 TRBV27A0A0K0K1C4 114 aa9.41□□□□□ -0.9
VRK3-205ENST00000593919 PRSS29PA6NIE9 313 aa9.41□□□□□ -0.9
VRK3-205ENST00000593919 K7EIL1 84 aa9.41□□□□□ -0.9
VRK3-205ENST00000593919 DEFB4AO15263 64 aa9.41□□□□□ -0.9
VRK3-205ENST00000593919 OR4C5Q8NGB2 326 aa9.41□□□□□ -0.9
VRK3-205ENST00000593919 ZNF479Q96JC4 524 aa9.41□□□□□ -0.9
VRK3-205ENST00000593919 CDIP1Q9H305 208 aa9.41□□□□□ -0.9
VRK3-205ENST00000593919 TRGV2A0A075B6R0 118 aa9.41□□□□□ -0.9
VRK3-205ENST00000593919 TRAV8-6A0A0B4J262 113 aa9.41□□□□□ -0.9
VRK3-205ENST00000593919 TRAV4A0A0B4J268 109 aa9.41□□□□□ -0.9
VRK3-205ENST00000593919 MIFP14174 115 aa9.41□□□□□ -0.9
VRK3-205ENST00000593919 DGAT2L7PQ6IED9 249 aa9.41□□□□□ -0.9
VRK3-205ENST00000593919 Q6ZSN1 163 aa9.41□□□□□ -0.9
VRK3-205ENST00000593919 EIF4EBP3O60516 100 aaPredicted RBP9.4□□□□□ -0.9
VRK3-205ENST00000593919 IGHV3-53P01767 116 aa9.4□□□□□ -0.9
VRK3-205ENST00000593919 SEC11AP67812 179 aa9.4□□□□□ -0.9
VRK3-205ENST00000593919 RETNQ9HD89 108 aa9.4□□□□□ -0.9
VRK3-205ENST00000593919 TSHBP01222 138 aa9.39□□□□□ -0.91
VRK3-205ENST00000593919 RNF151Q2KHN1 245 aa9.39□□□□□ -0.91
VRK3-205ENST00000593919 GAGE10A6NGK3 116 aa9.39□□□□□ -0.91
VRK3-205ENST00000593919 IGIPA6NJ69 53 aa9.39□□□□□ -0.91
VRK3-205ENST00000593919 P0DMU3 169 aa9.39□□□□□ -0.91
VRK3-205ENST00000593919 FAM231AP0DMU4 169 aa9.39□□□□□ -0.91
VRK3-205ENST00000593919 FAM231CP0DMU5 169 aa9.39□□□□□ -0.91
VRK3-205ENST00000593919 DEFB130BP0DP73 79 aa9.39□□□□□ -0.91
VRK3-205ENST00000593919 DEFB130AP0DP74 79 aa9.39□□□□□ -0.91
VRK3-205ENST00000593919 VAMP3Q15836 100 aa9.39□□□□□ -0.91
VRK3-205ENST00000593919 FAM222AQ5U5X8 452 aa9.39□□□□□ -0.91
VRK3-205ENST00000593919 LINC00612Q8N6U2 182 aa9.39□□□□□ -0.91
VRK3-205ENST00000593919 MAPKAPK5-AS1Q8N8E1 139 aa9.39□□□□□ -0.91
VRK3-205ENST00000593919 CHAC1Q9BUX1 264 aa9.39□□□□□ -0.91
VRK3-205ENST00000593919 EDA2RQ9HAV5 297 aa9.39□□□□□ -0.91
VRK3-205ENST00000593919 TRBV25-1A0A075B6N4 114 aa9.38□□□□□ -0.91
VRK3-205ENST00000593919 LINC01549A6NIU2 74 aa9.38□□□□□ -0.91
VRK3-205ENST00000593919 VCX2Q9H322 139 aa9.38□□□□□ -0.91
VRK3-205ENST00000593919 A6NDN8 102 aa9.37□□□□□ -0.91
VRK3-205ENST00000593919 LYRM9A8MSI8 78 aa9.37□□□□□ -0.91
VRK3-205ENST00000593919 KRTAP21-3Q3LHN1 58 aa9.37□□□□□ -0.91
VRK3-205ENST00000593919 TMEM141Q96I45 108 aa9.37□□□□□ -0.91
VRK3-205ENST00000593919 HIGD1BQ9P298 99 aa9.37□□□□□ -0.91
VRK3-205ENST00000593919 Q9UF83 564 aa9.37□□□□□ -0.91
VRK3-205ENST00000593919 F8WDY8 70 aa9.37□□□□□ -0.91
VRK3-205ENST00000593919 I3L3M4 83 aa9.37□□□□□ -0.91
VRK3-205ENST00000593919 RHOHQ15669 191 aa9.37□□□□□ -0.91
VRK3-205ENST00000593919 SBSPONQ8IVN8 264 aa9.37□□□□□ -0.91
VRK3-205ENST00000593919 TIMM17AQ99595 171 aa9.37□□□□□ -0.91
VRK3-205ENST00000593919 CELA1Q9UNI1 258 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms