RNA–Protein interactions for RNA: ENST00000593742.1

SOD3-202, Transcript of superoxide dismutase 3, humanhuman

TSL 5

Gene SOD3, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD3-202ENST00000593742 MYCBP2O75592 4640 aa7.86□□□□□ -1.15
SOD3-202ENST00000593742 IGLV10-54A0A075B6I4 117 aa7.85□□□□□ -1.15
SOD3-202ENST00000593742 A0A1B0GVG6 124 aa7.85□□□□□ -1.15
SOD3-202ENST00000593742 TMEM250H0YL14 139 aa7.85□□□□□ -1.15
SOD3-202ENST00000593742 UBE2L6O14933 153 aa7.85□□□□□ -1.15
SOD3-202ENST00000593742 MIAQ16674 131 aa7.85□□□□□ -1.15
SOD3-202ENST00000593742 GTSF1Q8WW33 167 aa7.85□□□□□ -1.15
SOD3-202ENST00000593742 PGLYRP4Q96LB8 373 aa7.85□□□□□ -1.15
SOD3-202ENST00000593742 TMEM243Q9BU79 118 aa7.85□□□□□ -1.15
SOD3-202ENST00000593742 NIT2Q9NQR4 276 aa7.85□□□□□ -1.15
SOD3-202ENST00000593742 VPS13BQ7Z7G8 4022 aa7.85□□□□□ -1.15
SOD3-202ENST00000593742 USP17L23D6RBM5 183 aa7.84□□□□□ -1.15
SOD3-202ENST00000593742 AMTP48728 403 aa7.84□□□□□ -1.15
SOD3-202ENST00000593742 FOXA3P55318 350 aaPredicted RBP7.84□□□□□ -1.15
SOD3-202ENST00000593742 C14orf177Q52M58 125 aa7.84□□□□□ -1.15
SOD3-202ENST00000593742 SMIM15Q7Z3B0 74 aa7.84□□□□□ -1.15
SOD3-202ENST00000593742 REG3AQ06141 175 aa7.83□□□□□ -1.16
SOD3-202ENST00000593742 COTL1Q14019 142 aa7.83□□□□□ -1.16
SOD3-202ENST00000593742 WDR73Q6P4I2 378 aa7.83□□□□□ -1.16
SOD3-202ENST00000593742 GATD1Q8NB37 220 aa7.83□□□□□ -1.16
SOD3-202ENST00000593742 RPL39LQ96EH5 51 aaKnown RBP7.83□□□□□ -1.16
SOD3-202ENST00000593742 SMIM7Q9BQ49 75 aa7.83□□□□□ -1.16
SOD3-202ENST00000593742 CNFNQ9BYD5 112 aa7.83□□□□□ -1.16
SOD3-202ENST00000593742 IGLV4-60A0A075B6I1 120 aa7.82□□□□□ -1.16
SOD3-202ENST00000593742 IGKV3OR2-268A0A0C4DH90 116 aa7.82□□□□□ -1.16
SOD3-202ENST00000593742 Q6ZSA8 131 aa7.82□□□□□ -1.16
SOD3-202ENST00000593742 SCXQ7RTU7 201 aa7.82□□□□□ -1.16
SOD3-202ENST00000593742 C20orf203Q8NBC4 194 aa7.82□□□□□ -1.16
SOD3-202ENST00000593742 LYPD6BQ8NI32 183 aa7.82□□□□□ -1.16
SOD3-202ENST00000593742 BORCS7Q96B45 105 aa7.82□□□□□ -1.16
SOD3-202ENST00000593742 PRR34Q9NV39 138 aa7.82□□□□□ -1.16
SOD3-202ENST00000593742 SRRM2Q9UQ35 2752 aaKnown RBP7.82□□□□□ -1.16
SOD3-202ENST00000593742 ZNF727A8MUV8 499 aa7.81□□□□□ -1.16
SOD3-202ENST00000593742 A8MWL6 223 aa7.81□□□□□ -1.16
SOD3-202ENST00000593742 FAM231DQ6ZW35 169 aa7.81□□□□□ -1.16
SOD3-202ENST00000593742 FAM210AQ96ND0 272 aa7.81□□□□□ -1.16
SOD3-202ENST00000593742 GFRA4Q9GZZ7 299 aa7.81□□□□□ -1.16
SOD3-202ENST00000593742 PRSS1P07477 247 aa7.8□□□□□ -1.16
SOD3-202ENST00000593742 LINC01551Q86U37 167 aa7.8□□□□□ -1.16
SOD3-202ENST00000593742 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.79□□□□□ -1.16
SOD3-202ENST00000593742 IGKV2-29A2NJV5 120 aaPredicted RBP7.79□□□□□ -1.16
SOD3-202ENST00000593742 APCSP02743 223 aa7.79□□□□□ -1.16
SOD3-202ENST00000593742 PLA2G1BP04054 148 aaKnown RBP7.79□□□□□ -1.16
SOD3-202ENST00000593742 SRP19P09132 144 aaKnown RBP7.79□□□□□ -1.16
SOD3-202ENST00000593742 AMMECR1LQ6DCA0 310 aa7.79□□□□□ -1.16
SOD3-202ENST00000593742 RNASEKQ6P5S7 137 aaKnown RBP7.79□□□□□ -1.16
SOD3-202ENST00000593742 hDV102S1A0JD36 115 aa7.78□□□□□ -1.16
SOD3-202ENST00000593742 SDHAF1A6NFY7 115 aa7.78□□□□□ -1.16
SOD3-202ENST00000593742 HIGD1CA8MV81 97 aa7.78□□□□□ -1.16
SOD3-202ENST00000593742 CT83Q5H943 113 aa7.78□□□□□ -1.16
SOD3-202ENST00000593742 KRTAP26-1Q6PEX3 210 aa7.78□□□□□ -1.16
SOD3-202ENST00000593742 CIRBP-AS1Q8TBR5 109 aa7.78□□□□□ -1.16
SOD3-202ENST00000593742 CHAC1Q9BUX1 264 aa7.78□□□□□ -1.16
SOD3-202ENST00000593742 TRAV8-4A0A0B4J246 113 aa7.77□□□□□ -1.17
SOD3-202ENST00000593742 A0A1B0GUT8 65 aa7.77□□□□□ -1.17
SOD3-202ENST00000593742 A0A1B0GUV1 79 aa7.77□□□□□ -1.17
SOD3-202ENST00000593742 GAS8-AS1O95177 125 aa7.77□□□□□ -1.17
SOD3-202ENST00000593742 PMCHP20382 165 aa7.77□□□□□ -1.17
SOD3-202ENST00000593742 TSKUQ8WUA8 353 aa7.77□□□□□ -1.17
SOD3-202ENST00000593742 GAGE12HA6NDE8 117 aa7.76□□□□□ -1.17
SOD3-202ENST00000593742 ADIRFQ15847 76 aa7.76□□□□□ -1.17
SOD3-202ENST00000593742 TEX261Q6UWH6 196 aa7.76□□□□□ -1.17
SOD3-202ENST00000593742 OSTCQ9NRP0 149 aa7.76□□□□□ -1.17
SOD3-202ENST00000593742 TMEM242Q9NWH2 141 aa7.76□□□□□ -1.17
SOD3-202ENST00000593742 SMKR1H3BMG3 65 aa7.75□□□□□ -1.17
SOD3-202ENST00000593742 I3L3M4 83 aa7.75□□□□□ -1.17
SOD3-202ENST00000593742 NCR2O95944 276 aa7.75□□□□□ -1.17
SOD3-202ENST00000593742 TMEM241Q24JQ0 296 aa7.75□□□□□ -1.17
SOD3-202ENST00000593742 AMN1Q8IY45 258 aa7.75□□□□□ -1.17
SOD3-202ENST00000593742 ST20Q9HBF5 79 aa7.75□□□□□ -1.17
SOD3-202ENST00000593742 AP5S1Q9NUS5 200 aa7.75□□□□□ -1.17
SOD3-202ENST00000593742 C9JQL5 133 aa7.74□□□□□ -1.17
SOD3-202ENST00000593742 FGF6P10767 208 aa7.74□□□□□ -1.17
SOD3-202ENST00000593742 RPL23P62829 140 aaKnown RBP7.74□□□□□ -1.17
SOD3-202ENST00000593742 DGAT2L7PQ6IED9 249 aa7.74□□□□□ -1.17
SOD3-202ENST00000593742 CLRN3Q8NCR9 226 aa7.74□□□□□ -1.17
SOD3-202ENST00000593742 ISOC2Q96AB3 205 aa7.74□□□□□ -1.17
SOD3-202ENST00000593742 TMEM191AQ9H0A3 160 aa7.74□□□□□ -1.17
SOD3-202ENST00000593742 V9GYV3 84 aa7.74□□□□□ -1.17
SOD3-202ENST00000593742 NDUFS6O75380 124 aaKnown RBP7.73□□□□□ -1.17
SOD3-202ENST00000593742 RAB4AP20338 218 aa7.73□□□□□ -1.17
SOD3-202ENST00000593742 RPS10P46783 165 aaKnown RBP7.73□□□□□ -1.17
SOD3-202ENST00000593742 SRSF3P84103 164 aaKnown RBP7.73□□□□□ -1.17
SOD3-202ENST00000593742 RIGQ13278 110 aa7.73□□□□□ -1.17
SOD3-202ENST00000593742 HIGD2BQ4VC39 106 aa7.73□□□□□ -1.17
SOD3-202ENST00000593742 C9orf163Q8N9P6 203 aa7.73□□□□□ -1.17
SOD3-202ENST00000593742 NUP35Q8NFH5 326 aa7.73□□□□□ -1.17
SOD3-202ENST00000593742 CHCHD10Q8WYQ3 142 aaPredicted RBP7.73□□□□□ -1.17
SOD3-202ENST00000593742 RNF185Q96GF1 192 aa7.73□□□□□ -1.17
SOD3-202ENST00000593742 TMEM101Q96IK0 257 aa7.73□□□□□ -1.17
SOD3-202ENST00000593742 BTF3L4Q96K17 158 aa7.73□□□□□ -1.17
SOD3-202ENST00000593742 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.73□□□□□ -1.17
SOD3-202ENST00000593742 TRBV6-5A0A0K0K1A5 114 aa7.72□□□□□ -1.17
SOD3-202ENST00000593742 TSHBP01222 138 aa7.72□□□□□ -1.17
SOD3-202ENST00000593742 PEA15Q15121 130 aa7.72□□□□□ -1.17
SOD3-202ENST00000593742 FAM74A3Q4VXF1 159 aa7.72□□□□□ -1.17
SOD3-202ENST00000593742 NAT8Q9UHE5 227 aa7.72□□□□□ -1.17
SOD3-202ENST00000593742 NAT8BQ9UHF3 227 aa7.72□□□□□ -1.17
SOD3-202ENST00000593742 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.71□□□□□ -1.18
SOD3-202ENST00000593742 FAM231BA6NCW3 169 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms