RNA–Protein interactions for RNA: ENST00000593174.5

CCDC130-212, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,783 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-212ENST00000593174 HERVK_113P61574 105 aa12.29□□□□□ -0.44
CCDC130-212ENST00000593174 SUMO4Q6EEV6 95 aa12.29□□□□□ -0.44
CCDC130-212ENST00000593174 HIST1H4GQ99525 98 aa12.29□□□□□ -0.44
CCDC130-212ENST00000593174 TIMM17AQ99595 171 aa12.29□□□□□ -0.44
CCDC130-212ENST00000593174 IGHV3-16A0A0C4DH30 117 aa12.28□□□□□ -0.44
CCDC130-212ENST00000593174 F5H697 171 aa12.28□□□□□ -0.44
CCDC130-212ENST00000593174 SPRY2O43597 315 aa12.28□□□□□ -0.44
CCDC130-212ENST00000593174 HTN1P15515 57 aa12.28□□□□□ -0.44
CCDC130-212ENST00000593174 KRTAP21-3Q3LHN1 58 aa12.28□□□□□ -0.44
CCDC130-212ENST00000593174 ZFP2Q6ZN57 461 aa12.28□□□□□ -0.44
CCDC130-212ENST00000593174 C1QTNF4Q9BXJ3 329 aa12.28□□□□□ -0.44
CCDC130-212ENST00000593174 NHP2Q9NX24 153 aaKnown RBP12.28□□□□□ -0.44
CCDC130-212ENST00000593174 TRBV27A0A0K0K1C4 114 aa12.28□□□□□ -0.44
CCDC130-212ENST00000593174 PMVKQ15126 192 aa12.28□□□□□ -0.44
CCDC130-212ENST00000593174 RNF151Q2KHN1 245 aa12.28□□□□□ -0.44
CCDC130-212ENST00000593174 C1orf158Q8N1D5 194 aa12.28□□□□□ -0.44
CCDC130-212ENST00000593174 PHLDA1Q8WV24 401 aaPredicted RBP12.28□□□□□ -0.44
CCDC130-212ENST00000593174 NOTCH1P46531 2555 aa12.27□□□□□ -0.44
CCDC130-212ENST00000593174 DNAH3Q8TD57 4116 aa12.27□□□□□ -0.44
CCDC130-212ENST00000593174 TRGV11A0A075B6L2 103 aa12.27□□□□□ -0.45
CCDC130-212ENST00000593174 IGHV3OR16-12A0A075B7B8 117 aa12.27□□□□□ -0.45
CCDC130-212ENST00000593174 PCP4P48539 62 aa12.27□□□□□ -0.45
CCDC130-212ENST00000593174 RHOHQ15669 191 aa12.26□□□□□ -0.45
CCDC130-212ENST00000593174 VPS25Q9BRG1 176 aa12.26□□□□□ -0.45
CCDC130-212ENST00000593174 LINC00467Q9BRT7 94 aa12.26□□□□□ -0.45
CCDC130-212ENST00000593174 TRBV7-3A0A075B6L6 115 aa12.25□□□□□ -0.45
CCDC130-212ENST00000593174 IGIPA6NJ69 53 aa12.25□□□□□ -0.45
CCDC130-212ENST00000593174 PRM2P04554 102 aa12.25□□□□□ -0.45
CCDC130-212ENST00000593174 MDFICQ9P1T7 246 aa12.25□□□□□ -0.45
CCDC130-212ENST00000593174 TP53TG1Q9Y2A0 90 aa12.25□□□□□ -0.45
CCDC130-212ENST00000593174 NBEAL1Q6ZS30 2694 aa12.25□□□□□ -0.45
CCDC130-212ENST00000593174 MGAM2Q2M2H8 2515 aa12.25□□□□□ -0.45
CCDC130-212ENST00000593174 TMEM238LA0A1B0GVL6 79 aa12.25□□□□□ -0.45
CCDC130-212ENST00000593174 SDHAF1A6NFY7 115 aa12.25□□□□□ -0.45
CCDC130-212ENST00000593174 A6NJY4 79 aa12.25□□□□□ -0.45
CCDC130-212ENST00000593174 C12orf74Q32Q52 190 aa12.25□□□□□ -0.45
CCDC130-212ENST00000593174 CSNK1G2-AS1Q8NCQ2 148 aa12.25□□□□□ -0.45
CCDC130-212ENST00000593174 PRADC1Q9BSG0 188 aa12.25□□□□□ -0.45
CCDC130-212ENST00000593174 MUC4Q99102 2169 aa12.25□□□□□ -0.45
CCDC130-212ENST00000593174 A0A1B0GWB2 263 aa12.24□□□□□ -0.45
CCDC130-212ENST00000593174 IGHV4-30-4P0DP06 118 aa12.24□□□□□ -0.45
CCDC130-212ENST00000593174 NAA38Q9BRA0 125 aaKnown RBP12.24□□□□□ -0.45
CCDC130-212ENST00000593174 DNHD1Q96M86 4753 aa12.24□□□□□ -0.45
CCDC130-212ENST00000593174 A0A087WWL8 130 aa12.23□□□□□ -0.45
CCDC130-212ENST00000593174 IGLL5B9A064 214 aa12.23□□□□□ -0.45
CCDC130-212ENST00000593174 NEGR1Q7Z3B1 354 aa12.23□□□□□ -0.45
CCDC130-212ENST00000593174 APOC4P55056 127 aa12.23□□□□□ -0.45
CCDC130-212ENST00000593174 ZNF56Q15929 161 aa12.23□□□□□ -0.45
CCDC130-212ENST00000593174 ZNF815PA8K554 130 aa12.22□□□□□ -0.45
CCDC130-212ENST00000593174 CRYGDP07320 174 aa12.22□□□□□ -0.45
CCDC130-212ENST00000593174 KIR2DL5BQ8NHK3 375 aa12.22□□□□□ -0.45
CCDC130-212ENST00000593174 ZNF479Q96JC4 524 aa12.22□□□□□ -0.45
CCDC130-212ENST00000593174 JPT2Q9H910 190 aa12.22□□□□□ -0.45
CCDC130-212ENST00000593174 NBEAL2Q6ZNJ1 2754 aa12.21□□□□□ -0.45
CCDC130-212ENST00000593174 C11orf86A6NJI1 115 aa12.21□□□□□ -0.45
CCDC130-212ENST00000593174 M0QY20 66 aa12.21□□□□□ -0.45
CCDC130-212ENST00000593174 AZU1P20160 251 aa12.21□□□□□ -0.45
CCDC130-212ENST00000593174 ZNF415Q09FC8 603 aa12.21□□□□□ -0.45
CCDC130-212ENST00000593174 EDA2RQ9HAV5 297 aa12.21□□□□□ -0.45
CCDC130-212ENST00000593174 K7ERJ3 54 aa12.2□□□□□ -0.46
CCDC130-212ENST00000593174 FAM74A4Q5TZK3 123 aa12.2□□□□□ -0.46
CCDC130-212ENST00000593174 SCGB1D4Q6XE38 83 aa12.2□□□□□ -0.46
CCDC130-212ENST00000593174 IGLV4-69A0A075B6H9 119 aa12.2□□□□□ -0.46
CCDC130-212ENST00000593174 F8W1H4 67 aa12.2□□□□□ -0.46
CCDC130-212ENST00000593174 TSHBP01222 138 aa12.2□□□□□ -0.46
CCDC130-212ENST00000593174 PIK3CD-AS1Q5SR53 167 aa12.2□□□□□ -0.46
CCDC130-212ENST00000593174 RRN3P1Q2M238 152 aa12.19□□□□□ -0.46
CCDC130-212ENST00000593174 ZNF876PQ49A33 203 aa12.19□□□□□ -0.46
CCDC130-212ENST00000593174 I3L3M4 83 aa12.18□□□□□ -0.46
CCDC130-212ENST00000593174 C11orf72Q8NBR9 251 aa12.18□□□□□ -0.46
CCDC130-212ENST00000593174 A8MZ25 164 aa12.17□□□□□ -0.46
CCDC130-212ENST00000593174 SRSF9Q13242 221 aaKnown RBP eCLIP12.17□□□□□ -0.46
CCDC130-212ENST00000593174 NFE4Q86UQ8 179 aa12.17□□□□□ -0.46
CCDC130-212ENST00000593174 TMEM263Q8WUH6 116 aaKnown RBP12.17□□□□□ -0.46
CCDC130-212ENST00000593174 PTH2Q96A98 100 aa12.17□□□□□ -0.46
CCDC130-212ENST00000593174 SPANXB1Q9NS25 103 aaPredicted RBP12.17□□□□□ -0.46
CCDC130-212ENST00000593174 RPL39P62891 51 aaKnown RBP12.16□□□□□ -0.46
CCDC130-212ENST00000593174 DEFB135Q30KP9 77 aa12.16□□□□□ -0.46
CCDC130-212ENST00000593174 SPXQ9BT56 116 aa12.16□□□□□ -0.46
CCDC130-212ENST00000593174 M0R2P5 195 aa12.15□□□□□ -0.46
CCDC130-212ENST00000593174 CRYBA4P53673 196 aa12.15□□□□□ -0.46
CCDC130-212ENST00000593174 TMEM170BQ5T4T1 132 aa12.15□□□□□ -0.46
CCDC130-212ENST00000593174 LYRM7Q5U5X0 104 aa12.15□□□□□ -0.46
CCDC130-212ENST00000593174 C20orf203Q8NBC4 194 aa12.15□□□□□ -0.46
CCDC130-212ENST00000593174 C16orf74Q96GX8 76 aa12.15□□□□□ -0.46
CCDC130-212ENST00000593174 A8MWV9 139 aa12.14□□□□□ -0.47
CCDC130-212ENST00000593174 PRB2P02812 416 aaPredicted RBP12.14□□□□□ -0.47
CCDC130-212ENST00000593174 KPRPQ5T749 579 aaPredicted RBP12.14□□□□□ -0.47
CCDC130-212ENST00000593174 J3QR89 54 aa12.13□□□□□ -0.47
CCDC130-212ENST00000593174 IL17DQ8TAD2 202 aa12.13□□□□□ -0.47
CCDC130-212ENST00000593174 LGALS3P17931 250 aaKnown RBP12.13□□□□□ -0.47
CCDC130-212ENST00000593174 UBE2D1P51668 147 aa12.13□□□□□ -0.47
CCDC130-212ENST00000593174 PYGO1Q9Y3Y4 419 aa12.13□□□□□ -0.47
CCDC130-212ENST00000593174 X6R8D5 127 aa12.13□□□□□ -0.47
CCDC130-212ENST00000593174 A0A0J9YY99 117 aa12.12□□□□□ -0.47
CCDC130-212ENST00000593174 SMIM9A6NGZ8 99 aa12.12□□□□□ -0.47
CCDC130-212ENST00000593174 LEPROTO15243 131 aa12.12□□□□□ -0.47
CCDC130-212ENST00000593174 COTL1Q14019 142 aa12.12□□□□□ -0.47
CCDC130-212ENST00000593174 MRPL16Q9NX20 251 aaKnown RBP12.12□□□□□ -0.47
CCDC130-212ENST00000593174 J3QQQ9 107 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms