RNA–Protein interactions for RNA: ENST00000593099.5

LIG3-216, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 4,664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-216ENST00000593099 FAM236DA0A1B0GTK5 79 aa7.37□□□□□ -1.23
LIG3-216ENST00000593099 FAM236CP0DP71 79 aa7.37□□□□□ -1.23
LIG3-216ENST00000593099 Q8N8P6 123 aa7.37□□□□□ -1.23
LIG3-216ENST00000593099 ATP6V0E2Q8NHE4 81 aa7.37□□□□□ -1.23
LIG3-216ENST00000593099 Q6ZUT4 128 aa7.37□□□□□ -1.23
LIG3-216ENST00000593099 RASL10AQ92737 203 aa7.37□□□□□ -1.23
LIG3-216ENST00000593099 NACAE9PAV3 2078 aa7.37□□□□□ -1.23
LIG3-216ENST00000593099 F8W735 103 aaPredicted RBP7.37□□□□□ -1.23
LIG3-216ENST00000593099 MED14OSP0DP75 135 aa7.37□□□□□ -1.23
LIG3-216ENST00000593099 C20orf78Q9BR46 151 aa7.37□□□□□ -1.23
LIG3-216ENST00000593099 SMIM2Q9BVW6 85 aa7.37□□□□□ -1.23
LIG3-216ENST00000593099 ANGP03950 147 aaKnown RBP7.36□□□□□ -1.23
LIG3-216ENST00000593099 HAMPP81172 84 aa7.36□□□□□ -1.23
LIG3-216ENST00000593099 FOXI1Q12951 378 aa7.36□□□□□ -1.23
LIG3-216ENST00000593099 PMAIP1Q13794 54 aa7.36□□□□□ -1.23
LIG3-216ENST00000593099 C6orf226Q5I0X4 101 aa7.36□□□□□ -1.23
LIG3-216ENST00000593099 C2orf66Q6UXQ4 117 aa7.36□□□□□ -1.23
LIG3-216ENST00000593099 TEN1Q86WV5 123 aa7.36□□□□□ -1.23
LIG3-216ENST00000593099 Q8N2B8 174 aa7.36□□□□□ -1.23
LIG3-216ENST00000593099 TP53TG1Q9Y2A0 90 aa7.36□□□□□ -1.23
LIG3-216ENST00000593099 LYRM9A8MSI8 78 aa7.36□□□□□ -1.23
LIG3-216ENST00000593099 HHLA3Q9XRX5 114 aa7.36□□□□□ -1.23
LIG3-216ENST00000593099 K7EQD1 137 aa7.36□□□□□ -1.23
LIG3-216ENST00000593099 MIFP14174 115 aa7.36□□□□□ -1.23
LIG3-216ENST00000593099 WFDC2Q14508 124 aa7.36□□□□□ -1.23
LIG3-216ENST00000593099 KIR2DL5BQ8NHK3 375 aa7.36□□□□□ -1.23
LIG3-216ENST00000593099 CFAP46Q8IYW2 2715 aa7.36□□□□□ -1.23
LIG3-216ENST00000593099 PRO0628Q9UI54 55 aa7.36□□□□□ -1.23
LIG3-216ENST00000593099 IGLV1-51P01701 117 aa7.35□□□□□ -1.23
LIG3-216ENST00000593099 IGLL5B9A064 214 aa7.35□□□□□ -1.23
LIG3-216ENST00000593099 COX8AP10176 69 aa7.35□□□□□ -1.23
LIG3-216ENST00000593099 LAMA2P24043 3122 aaKnown RBP7.35□□□□□ -1.23
LIG3-216ENST00000593099 PRB2P02812 416 aaPredicted RBP7.35□□□□□ -1.23
LIG3-216ENST00000593099 PFN2P35080 140 aa7.35□□□□□ -1.23
LIG3-216ENST00000593099 ZC2HC1BQ5TFG8 222 aa7.35□□□□□ -1.23
LIG3-216ENST00000593099 Q6ZWC4 215 aa7.35□□□□□ -1.23
LIG3-216ENST00000593099 NEGR1Q7Z3B1 354 aa7.35□□□□□ -1.23
LIG3-216ENST00000593099 CEND1Q8N111 149 aa7.35□□□□□ -1.23
LIG3-216ENST00000593099 MDFICQ9P1T7 246 aa7.35□□□□□ -1.23
LIG3-216ENST00000593099 PRO0255Q9UI72 69 aa7.35□□□□□ -1.23
LIG3-216ENST00000593099 TANC2Q9HCD6 1990 aa7.35□□□□□ -1.23
LIG3-216ENST00000593099 FSHBP01225 129 aa7.34□□□□□ -1.23
LIG3-216ENST00000593099 FAM222AQ5U5X8 452 aa7.34□□□□□ -1.23
LIG3-216ENST00000593099 MUSTN1Q8IVN3 82 aa7.34□□□□□ -1.23
LIG3-216ENST00000593099 C3orf22Q8N5N4 141 aa7.34□□□□□ -1.23
LIG3-216ENST00000593099 WFDC9Q8NEX5 89 aa7.34□□□□□ -1.23
LIG3-216ENST00000593099 NPYP01303 97 aa7.34□□□□□ -1.23
LIG3-216ENST00000593099 TMEM141Q96I45 108 aa7.34□□□□□ -1.23
LIG3-216ENST00000593099 ZNF561-AS1K7EIQ3 104 aa7.34□□□□□ -1.24
LIG3-216ENST00000593099 MT-ATP8P03928 68 aa7.34□□□□□ -1.24
LIG3-216ENST00000593099 Q0VG73 95 aa7.34□□□□□ -1.24
LIG3-216ENST00000593099 KRTAP24-1Q3LI83 254 aa7.33□□□□□ -1.24
LIG3-216ENST00000593099 PLEKHB2Q96CS7 222 aa7.33□□□□□ -1.24
LIG3-216ENST00000593099 WFDC10AQ9H1F0 79 aa7.33□□□□□ -1.24
LIG3-216ENST00000593099 IGHV3-64A0A075B6Q5 118 aa7.33□□□□□ -1.24
LIG3-216ENST00000593099 LINC00158P58513 81 aa7.33□□□□□ -1.24
LIG3-216ENST00000593099 IGHV4-30-4P0DP06 118 aa7.33□□□□□ -1.24
LIG3-216ENST00000593099 DAZ2Q13117 558 aaKnown RBP7.33□□□□□ -1.24
LIG3-216ENST00000593099 SUMO4Q6EEV6 95 aa7.33□□□□□ -1.24
LIG3-216ENST00000593099 FAM19A5Q7Z5A7 132 aaPredicted RBP7.33□□□□□ -1.24
LIG3-216ENST00000593099 DAZ4Q86SG3 579 aaKnown RBP7.33□□□□□ -1.24
LIG3-216ENST00000593099 C18orf32Q8TCD1 76 aa7.33□□□□□ -1.24
LIG3-216ENST00000593099 DAZ3Q9NR90 486 aaKnown RBP7.33□□□□□ -1.24
LIG3-216ENST00000593099 LINC00694P0DN24 101 aa7.32□□□□□ -1.24
LIG3-216ENST00000593099 DCANP1Q8TF63 244 aa7.32□□□□□ -1.24
LIG3-216ENST00000593099 MSRB1Q9NZV6 116 aa7.32□□□□□ -1.24
LIG3-216ENST00000593099 IGKV2D-24A0A075B6R9 120 aa7.32□□□□□ -1.24
LIG3-216ENST00000593099 TRAV4A0A0B4J268 109 aa7.32□□□□□ -1.24
LIG3-216ENST00000593099 TIMM17BO60830 172 aa7.32□□□□□ -1.24
LIG3-216ENST00000593099 C10orf91Q5T1B1 145 aa7.32□□□□□ -1.24
LIG3-216ENST00000593099 GDF5OSQ5U4N7 250 aa7.32□□□□□ -1.24
LIG3-216ENST00000593099 Q6ZQT7 251 aa7.32□□□□□ -1.24
LIG3-216ENST00000593099 CARD19Q96LW7 228 aa7.32□□□□□ -1.24
LIG3-216ENST00000593099 FGF6P10767 208 aa7.32□□□□□ -1.24
LIG3-216ENST00000593099 Q9HAA7 133 aa7.31□□□□□ -1.24
LIG3-216ENST00000593099 Q6ZTI0 123 aa7.31□□□□□ -1.24
LIG3-216ENST00000593099 COL27A1Q8IZC6 1860 aaPredicted RBP7.31□□□□□ -1.24
LIG3-216ENST00000593099 TRBV7-3A0A075B6L6 115 aa7.31□□□□□ -1.24
LIG3-216ENST00000593099 DEFB131BA0A096LNP1 70 aa7.31□□□□□ -1.24
LIG3-216ENST00000593099 K7ERJ3 54 aa7.31□□□□□ -1.24
LIG3-216ENST00000593099 A0A096LNT2 108 aa7.31□□□□□ -1.24
LIG3-216ENST00000593099 CTRLP40313 264 aa7.31□□□□□ -1.24
LIG3-216ENST00000593099 ZNF80P51504 273 aaPredicted RBP7.31□□□□□ -1.24
LIG3-216ENST00000593099 ODF3L2Q3SX64 289 aa7.31□□□□□ -1.24
LIG3-216ENST00000593099 ZFAND2AQ8N6M9 145 aa7.31□□□□□ -1.24
LIG3-216ENST00000593099 CENPEQ02224 2701 aa7.31□□□□□ -1.24
LIG3-216ENST00000593099 TRAV12-1A0A0B4J245 112 aa7.3□□□□□ -1.24
LIG3-216ENST00000593099 F8WDY8 70 aa7.3□□□□□ -1.24
LIG3-216ENST00000593099 TIMM17AQ99595 171 aa7.3□□□□□ -1.24
LIG3-216ENST00000593099 LGALS9BQ3B8N2 356 aa7.3□□□□□ -1.24
LIG3-216ENST00000593099 TNRC18O15417 2968 aaPredicted RBP7.3□□□□□ -1.24
LIG3-216ENST00000593099 SMIM26A0A096LP01 95 aa7.3□□□□□ -1.24
LIG3-216ENST00000593099 TRBV10-1A0A0K0K1A3 114 aa7.3□□□□□ -1.24
LIG3-216ENST00000593099 CCDC179H3BU77 68 aa7.3□□□□□ -1.24
LIG3-216ENST00000593099 K7EMI3 77 aa7.3□□□□□ -1.24
LIG3-216ENST00000593099 C19orf71A6NCJ1 209 aa7.29□□□□□ -1.24
LIG3-216ENST00000593099 C12orf74Q32Q52 190 aa7.29□□□□□ -1.24
LIG3-216ENST00000593099 CLPSL2Q6UWE3 100 aa7.29□□□□□ -1.24
LIG3-216ENST00000593099 TIMM21Q9BVV7 248 aa7.29□□□□□ -1.24
LIG3-216ENST00000593099 IGHV4-28A0A0C4DH34 117 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms