RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 URB1-AS1Q96HZ7 61 aa6.58□□□□□ -1.36
DDX39A-220ENST00000593008 KRTAP1-5Q9BYS1 174 aa6.58□□□□□ -1.36
DDX39A-220ENST00000593008 GTSF1LQ9H1H1 148 aa6.58□□□□□ -1.36
DDX39A-220ENST00000593008 DNAH11Q96DT5 4516 aa6.58□□□□□ -1.36
DDX39A-220ENST00000593008 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.57□□□□□ -1.36
DDX39A-220ENST00000593008 IGKV2-29A2NJV5 120 aaPredicted RBP6.57□□□□□ -1.36
DDX39A-220ENST00000593008 IFI27P40305 119 aaPredicted RBP6.57□□□□□ -1.36
DDX39A-220ENST00000593008 GAGE6Q13070 117 aa6.57□□□□□ -1.36
DDX39A-220ENST00000593008 COX19Q49B96 90 aa6.57□□□□□ -1.36
DDX39A-220ENST00000593008 C18orf32Q8TCD1 76 aa6.57□□□□□ -1.36
DDX39A-220ENST00000593008 CHCHD7Q9BUK0 85 aa6.57□□□□□ -1.36
DDX39A-220ENST00000593008 MRPS16Q9Y3D3 137 aaKnown RBP6.57□□□□□ -1.36
DDX39A-220ENST00000593008 TRBV6-8A0A0A6YYG3 113 aa6.56□□□□□ -1.36
DDX39A-220ENST00000593008 TRAV8-6A0A0B4J262 113 aa6.56□□□□□ -1.36
DDX39A-220ENST00000593008 TRBV27A0A0K0K1C4 114 aa6.56□□□□□ -1.36
DDX39A-220ENST00000593008 I3L3M4 83 aa6.56□□□□□ -1.36
DDX39A-220ENST00000593008 RTL8CO15255 209 aa6.56□□□□□ -1.36
DDX39A-220ENST00000593008 PPBPP02775 128 aa6.56□□□□□ -1.36
DDX39A-220ENST00000593008 PMCHP20382 165 aa6.56□□□□□ -1.36
DDX39A-220ENST00000593008 TIRAPP58753 221 aa6.56□□□□□ -1.36
DDX39A-220ENST00000593008 LINC00310P59036 64 aa6.56□□□□□ -1.36
DDX39A-220ENST00000593008 Q6ZR54 194 aa6.56□□□□□ -1.36
DDX39A-220ENST00000593008 DAZ4Q86SG3 579 aaKnown RBP6.56□□□□□ -1.36
DDX39A-220ENST00000593008 MAP1LC3AQ9H492 121 aa6.56□□□□□ -1.36
DDX39A-220ENST00000593008 DAZ3Q9NR90 486 aaKnown RBP6.56□□□□□ -1.36
DDX39A-220ENST00000593008 HECTD4Q9Y4D8 3996 aa6.56□□□□□ -1.36
DDX39A-220ENST00000593008 IGHV3-30P01768 117 aa6.55□□□□□ -1.36
DDX39A-220ENST00000593008 IGHV3-33P01772 117 aa6.55□□□□□ -1.36
DDX39A-220ENST00000593008 IGHV3-30-3P0DP02 117 aa6.55□□□□□ -1.36
DDX39A-220ENST00000593008 IGHV3-30-5P0DP03 117 aa6.55□□□□□ -1.36
DDX39A-220ENST00000593008 BTF3P20290 206 aaKnown RBP6.55□□□□□ -1.36
DDX39A-220ENST00000593008 AMTP48728 403 aa6.55□□□□□ -1.36
DDX39A-220ENST00000593008 COTL1Q14019 142 aa6.55□□□□□ -1.36
DDX39A-220ENST00000593008 LELP1Q5T871 98 aa6.55□□□□□ -1.36
DDX39A-220ENST00000593008 C20orf78Q9BR46 151 aa6.55□□□□□ -1.36
DDX39A-220ENST00000593008 NBDYA0A0U1RRE5 68 aa6.54□□□□□ -1.36
DDX39A-220ENST00000593008 VCYO14598 125 aa6.54□□□□□ -1.36
DDX39A-220ENST00000593008 RPL39P62891 51 aaKnown RBP6.54□□□□□ -1.36
DDX39A-220ENST00000593008 SMAGPQ0VAQ4 97 aa6.54□□□□□ -1.36
DDX39A-220ENST00000593008 PMCHL1Q16048 86 aa6.54□□□□□ -1.36
DDX39A-220ENST00000593008 MPV17L2Q567V2 206 aa6.54□□□□□ -1.36
DDX39A-220ENST00000593008 TTC32Q5I0X7 151 aa6.54□□□□□ -1.36
DDX39A-220ENST00000593008 Q8N8P6 123 aa6.54□□□□□ -1.36
DDX39A-220ENST00000593008 Q8N976 141 aa6.54□□□□□ -1.36
DDX39A-220ENST00000593008 CHCHD5Q9BSY4 110 aa6.54□□□□□ -1.36
DDX39A-220ENST00000593008 Q9H8V8 135 aa6.54□□□□□ -1.36
DDX39A-220ENST00000593008 IGHV1-24A0A0C4DH33 117 aa6.53□□□□□ -1.36
DDX39A-220ENST00000593008 PRSS29PA6NIE9 313 aa6.53□□□□□ -1.36
DDX39A-220ENST00000593008 NUPR1O60356 82 aa6.53□□□□□ -1.36
DDX39A-220ENST00000593008 HIST1H2BKO60814 126 aa6.53□□□□□ -1.36
DDX39A-220ENST00000593008 HIST1H2BJP06899 126 aa6.53□□□□□ -1.36
DDX39A-220ENST00000593008 ESDP10768 282 aa6.53□□□□□ -1.36
DDX39A-220ENST00000593008 HIST1H2BOP23527 126 aa6.53□□□□□ -1.36
DDX39A-220ENST00000593008 FCER1GP30273 86 aa6.53□□□□□ -1.36
DDX39A-220ENST00000593008 HIST1H2BBP33778 126 aa6.53□□□□□ -1.36
DDX39A-220ENST00000593008 HIST1H2BDP58876 126 aa6.53□□□□□ -1.36
DDX39A-220ENST00000593008 HIST1H2BCP62807 126 aa6.53□□□□□ -1.36
DDX39A-220ENST00000593008 RPL32P62910 135 aaKnown RBP6.53□□□□□ -1.36
DDX39A-220ENST00000593008 HIST2H2BEQ16778 126 aa6.53□□□□□ -1.36
DDX39A-220ENST00000593008 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.53□□□□□ -1.36
DDX39A-220ENST00000593008 C1orf134Q5TEV5 83 aa6.53□□□□□ -1.36
DDX39A-220ENST00000593008 RNASEKQ6P5S7 137 aaKnown RBP6.53□□□□□ -1.36
DDX39A-220ENST00000593008 CLPSL2Q6UWE3 100 aa6.53□□□□□ -1.36
DDX39A-220ENST00000593008 LINC00336Q6ZUF6 198 aa6.53□□□□□ -1.36
DDX39A-220ENST00000593008 NIT1Q86X76 327 aa6.53□□□□□ -1.36
DDX39A-220ENST00000593008 C10orf126Q8N4M7 172 aa6.53□□□□□ -1.36
DDX39A-220ENST00000593008 HIST1H2BHQ93079 126 aa6.53□□□□□ -1.36
DDX39A-220ENST00000593008 HIST1H2BNQ99877 126 aa6.53□□□□□ -1.36
DDX39A-220ENST00000593008 HIST1H2BMQ99879 126 aa6.53□□□□□ -1.36
DDX39A-220ENST00000593008 UPK3BQ9BT76 320 aa6.53□□□□□ -1.36
DDX39A-220ENST00000593008 LAMTOR2Q9Y2Q5 125 aa6.53□□□□□ -1.36
DDX39A-220ENST00000593008 DNAH5Q8TE73 4624 aa6.52□□□□□ -1.37
DDX39A-220ENST00000593008 IGLV4-60A0A075B6I1 120 aa6.52□□□□□ -1.37
DDX39A-220ENST00000593008 TRBV25-1A0A075B6N4 114 aa6.52□□□□□ -1.37
DDX39A-220ENST00000593008 A0A096LNJ9 63 aa6.52□□□□□ -1.37
DDX39A-220ENST00000593008 PRSS47A8MTI9 375 aa6.52□□□□□ -1.37
DDX39A-220ENST00000593008 RNASE13Q5GAN3 156 aaKnown RBP6.52□□□□□ -1.37
DDX39A-220ENST00000593008 OPRPNQ99935 248 aaPredicted RBP6.52□□□□□ -1.37
DDX39A-220ENST00000593008 TMEM243Q9BU79 118 aa6.52□□□□□ -1.37
DDX39A-220ENST00000593008 TMEM262E9PQX1 116 aa6.51□□□□□ -1.37
DDX39A-220ENST00000593008 SIVA1O15304 175 aa6.51□□□□□ -1.37
DDX39A-220ENST00000593008 G0S2P27469 103 aa6.51□□□□□ -1.37
DDX39A-220ENST00000593008 RBX1P62877 108 aa6.51□□□□□ -1.37
DDX39A-220ENST00000593008 ZC2HC1BQ5TFG8 222 aa6.51□□□□□ -1.37
DDX39A-220ENST00000593008 C20orf203Q8NBC4 194 aa6.51□□□□□ -1.37
DDX39A-220ENST00000593008 PRSS3P2Q8NHM4 247 aa6.51□□□□□ -1.37
DDX39A-220ENST00000593008 FAM104AQ969W3 186 aa6.51□□□□□ -1.37
DDX39A-220ENST00000593008 KIR2DL4Q99706 377 aa6.51□□□□□ -1.37
DDX39A-220ENST00000593008 A0A1B0GVY2 172 aa6.5□□□□□ -1.37
DDX39A-220ENST00000593008 SERF1AO75920 110 aa6.5□□□□□ -1.37
DDX39A-220ENST00000593008 DNAH10OSP0CZ25 163 aa6.5□□□□□ -1.37
DDX39A-220ENST00000593008 FGF6P10767 208 aa6.5□□□□□ -1.37
DDX39A-220ENST00000593008 Q6ZUT4 128 aa6.5□□□□□ -1.37
DDX39A-220ENST00000593008 FA2HQ7L5A8 372 aa6.5□□□□□ -1.37
DDX39A-220ENST00000593008 C6orf223Q8N319 242 aa6.5□□□□□ -1.37
DDX39A-220ENST00000593008 PKHD1P08F94 4074 aa6.49□□□□□ -1.37
DDX39A-220ENST00000593008 LINC01546A6NGU7 62 aa6.49□□□□□ -1.37
DDX39A-220ENST00000593008 TNP2Q05952 138 aa6.49□□□□□ -1.37
DDX39A-220ENST00000593008 LAGE3Q14657 143 aa6.49□□□□□ -1.37
DDX39A-220ENST00000593008 LINC01556Q5JQF7 62 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 169.3 ms