RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412		A0A1B0GUV1	79 aa		11.49	□□□□□ -0.57
CIRBP-238	ENST00000592412	PDE6D	O43924	150 aa		11.49	□□□□□ -0.57
CIRBP-238	ENST00000592412	C15orf56	Q8N910	161 aa		11.49	□□□□□ -0.57
CIRBP-238	ENST00000592412	DPH3	Q96FX2	82 aa		11.49	□□□□□ -0.57
CIRBP-238	ENST00000592412	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	11.48	□□□□□ -0.57
CIRBP-238	ENST00000592412	TAGLN2	P37802	199 aa	Known RBP	11.48	□□□□□ -0.57
CIRBP-238	ENST00000592412	AP5S1	Q9NUS5	200 aa		11.48	□□□□□ -0.57
CIRBP-238	ENST00000592412	SMIM17	P0DL12	118 aa		11.47	□□□□□ -0.57
CIRBP-238	ENST00000592412	SUMO4	Q6EEV6	95 aa		11.47	□□□□□ -0.57
CIRBP-238	ENST00000592412	MED9	Q9NWA0	146 aa		11.47	□□□□□ -0.57
CIRBP-238	ENST00000592412	LPA	P08519	4548 aa		11.46	□□□□□ -0.57
CIRBP-238	ENST00000592412	GZMB	P10144	247 aa		11.46	□□□□□ -0.57
CIRBP-238	ENST00000592412	PRR3	P79522	188 aa	Known RBP	11.46	□□□□□ -0.57
CIRBP-238	ENST00000592412	COX6A2	Q02221	97 aa		11.46	□□□□□ -0.57
CIRBP-238	ENST00000592412	CENPW	Q5EE01	88 aa		11.46	□□□□□ -0.57
CIRBP-238	ENST00000592412	TMEM243	Q9BU79	118 aa		11.46	□□□□□ -0.57
CIRBP-238	ENST00000592412	MGP	P08493	103 aa		11.45	□□□□□ -0.58
CIRBP-238	ENST00000592412	IGLC6	P0CF74	106 aa		11.45	□□□□□ -0.58
CIRBP-238	ENST00000592412	PRSS3P2	Q8NHM4	247 aa		11.45	□□□□□ -0.58
CIRBP-238	ENST00000592412	LYPD6B	Q8NI32	183 aa		11.45	□□□□□ -0.58
CIRBP-238	ENST00000592412	C7orf33	Q8WU49	177 aa		11.45	□□□□□ -0.58
CIRBP-238	ENST00000592412	RAB19	A4D1S5	217 aa		11.44	□□□□□ -0.58
CIRBP-238	ENST00000592412	GNG4	P50150	75 aa		11.44	□□□□□ -0.58
CIRBP-238	ENST00000592412	KRTAP10-8	P60410	259 aa		11.43	□□□□□ -0.58
CIRBP-238	ENST00000592412	PGLYRP4	Q96LB8	373 aa		11.43	□□□□□ -0.58
CIRBP-238	ENST00000592412		A0A0J9YXV3	536 aa		11.42	□□□□□ -0.58
CIRBP-238	ENST00000592412	GAGE12H	A6NDE8	117 aa		11.42	□□□□□ -0.58
CIRBP-238	ENST00000592412		H7C1H1	209 aa		11.42	□□□□□ -0.58
CIRBP-238	ENST00000592412	MAJIN	Q3KP22	176 aa		11.42	□□□□□ -0.58
CIRBP-238	ENST00000592412	WDR73	Q6P4I2	378 aa		11.42	□□□□□ -0.58
CIRBP-238	ENST00000592412	TEX261	Q6UWH6	196 aa		11.42	□□□□□ -0.58
CIRBP-238	ENST00000592412	GTSF1	Q8WW33	167 aa		11.42	□□□□□ -0.58
CIRBP-238	ENST00000592412	DPH3P1	Q9H4G8	78 aa		11.42	□□□□□ -0.58
CIRBP-238	ENST00000592412	IGKV2-24	A0A0C4DH68	120 aa		11.41	□□□□□ -0.58
CIRBP-238	ENST00000592412	NDUFS6	O75380	124 aa	Known RBP	11.41	□□□□□ -0.58
CIRBP-238	ENST00000592412	RPS10	P46783	165 aa	Known RBP	11.41	□□□□□ -0.58
CIRBP-238	ENST00000592412	HIGD2B	Q4VC39	106 aa		11.41	□□□□□ -0.58
CIRBP-238	ENST00000592412	RASL11A	Q6T310	242 aa		11.41	□□□□□ -0.58
CIRBP-238	ENST00000592412	SMIM12	Q96EX1	92 aa		11.41	□□□□□ -0.58
CIRBP-238	ENST00000592412	TPPP3	Q9BW30	176 aa		11.41	□□□□□ -0.58
CIRBP-238	ENST00000592412	TRBV20OR9-2	A0A075B6H5	130 aa		11.4	□□□□□ -0.58
CIRBP-238	ENST00000592412	STPG4	Q8N801	248 aa		11.4	□□□□□ -0.58
CIRBP-238	ENST00000592412	FER1L6-AS1	Q8NA97	138 aa		11.4	□□□□□ -0.58
CIRBP-238	ENST00000592412	EIF5A2	Q9GZV4	153 aa	Known RBP	11.4	□□□□□ -0.58
CIRBP-238	ENST00000592412		A0A096LNI7	61 aa		11.39	□□□□□ -0.59
CIRBP-238	ENST00000592412	TMEM250	H0YL14	139 aa		11.39	□□□□□ -0.59
CIRBP-238	ENST00000592412	NIT2	Q9NQR4	276 aa		11.39	□□□□□ -0.59
CIRBP-238	ENST00000592412	C19orf71	A6NCJ1	209 aa		11.38	□□□□□ -0.59
CIRBP-238	ENST00000592412	FAM210A	Q96ND0	272 aa		11.38	□□□□□ -0.59
CIRBP-238	ENST00000592412	BIN3	Q9NQY0	253 aa		11.38	□□□□□ -0.59
CIRBP-238	ENST00000592412	GVQW2	A0A096LPI5	108 aa	Predicted RBP	11.37	□□□□□ -0.59
CIRBP-238	ENST00000592412	IGKV3OR2-268	A0A0C4DH90	116 aa		11.37	□□□□□ -0.59
CIRBP-238	ENST00000592412	UBE2L6	O14933	153 aa		11.37	□□□□□ -0.59
CIRBP-238	ENST00000592412	AMT	P48728	403 aa		11.37	□□□□□ -0.59
CIRBP-238	ENST00000592412	CEBPG	P53567	150 aa		11.37	□□□□□ -0.59
CIRBP-238	ENST00000592412	CACNG7	P62955	275 aa		11.37	□□□□□ -0.59
CIRBP-238	ENST00000592412	OR2D3	Q8NGH3	330 aa		11.37	□□□□□ -0.59
CIRBP-238	ENST00000592412	CFAP161	Q6P656	301 aa		11.36	□□□□□ -0.59
CIRBP-238	ENST00000592412	SRSF9	Q13242	221 aa	Known RBP eCLIP	11.35	□□□□□ -0.59
CIRBP-238	ENST00000592412	COTL1	Q14019	142 aa		11.35	□□□□□ -0.59
CIRBP-238	ENST00000592412	SPINK6	Q6UWN8	80 aa		11.35	□□□□□ -0.59
CIRBP-238	ENST00000592412	OCC1	Q8TAD7	63 aa		11.35	□□□□□ -0.59
CIRBP-238	ENST00000592412	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	11.35	□□□□□ -0.59
CIRBP-238	ENST00000592412	RPS20	P60866	119 aa	Known RBP	11.34	□□□□□ -0.59
CIRBP-238	ENST00000592412	LYZL1	Q6UWQ5	148 aa		11.34	□□□□□ -0.59
CIRBP-238	ENST00000592412	NTF3	P20783	257 aa		11.33	□□□□□ -0.6
CIRBP-238	ENST00000592412	FOXI1	Q12951	378 aa		11.33	□□□□□ -0.6
CIRBP-238	ENST00000592412	XKRY2	A2RUG3	117 aa		11.32	□□□□□ -0.6
CIRBP-238	ENST00000592412		F2Z2F3	143 aa		11.32	□□□□□ -0.6
CIRBP-238	ENST00000592412		K7EN84	100 aa		11.32	□□□□□ -0.6
CIRBP-238	ENST00000592412	SRP19	P09132	144 aa	Known RBP	11.32	□□□□□ -0.6
CIRBP-238	ENST00000592412	TRGC1	P0CF51	173 aa		11.32	□□□□□ -0.6
CIRBP-238	ENST00000592412	GATD1	Q8NB37	220 aa		11.32	□□□□□ -0.6
CIRBP-238	ENST00000592412	NUDT10	Q8NFP7	164 aa		11.32	□□□□□ -0.6
CIRBP-238	ENST00000592412	NUDT11	Q96G61	164 aa		11.32	□□□□□ -0.6
CIRBP-238	ENST00000592412	SMIM7	Q9BQ49	75 aa		11.32	□□□□□ -0.6
CIRBP-238	ENST00000592412	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	11.31	□□□□□ -0.6
CIRBP-238	ENST00000592412	TRAV26-2	A0A0B4J265	109 aa		11.31	□□□□□ -0.6
CIRBP-238	ENST00000592412	IGKV2-29	A2NJV5	120 aa	Predicted RBP	11.31	□□□□□ -0.6
CIRBP-238	ENST00000592412	GAS8-AS1	O95177	125 aa		11.31	□□□□□ -0.6
CIRBP-238	ENST00000592412	REG3G	Q6UW15	175 aa		11.31	□□□□□ -0.6
CIRBP-238	ENST00000592412	LINC00526	Q96FQ7	95 aa		11.31	□□□□□ -0.6
CIRBP-238	ENST00000592412	ZNF727	A8MUV8	499 aa		11.3	□□□□□ -0.6
CIRBP-238	ENST00000592412	CTRL	P40313	264 aa		11.3	□□□□□ -0.6
CIRBP-238	ENST00000592412	RNASE7	Q9H1E1	156 aa	Known RBP	11.3	□□□□□ -0.6
CIRBP-238	ENST00000592412	RPP21	Q9H633	154 aa	Known RBP	11.3	□□□□□ -0.6
CIRBP-238	ENST00000592412	PEA15	Q15121	130 aa		11.29	□□□□□ -0.6
CIRBP-238	ENST00000592412	RPL39L	Q96EH5	51 aa	Known RBP	11.29	□□□□□ -0.6
CIRBP-238	ENST00000592412	CNFN	Q9BYD5	112 aa		11.29	□□□□□ -0.6
CIRBP-238	ENST00000592412	MUC2	Q02817	5179 aa		11.29	□□□□□ -0.6
CIRBP-238	ENST00000592412	FGF6	P10767	208 aa		11.27	□□□□□ -0.61
CIRBP-238	ENST00000592412	RAB14	P61106	215 aa		11.27	□□□□□ -0.61
CIRBP-238	ENST00000592412	SRSF3	P84103	164 aa	Known RBP	11.27	□□□□□ -0.61
CIRBP-238	ENST00000592412	AMMECR1L	Q6DCA0	310 aa		11.27	□□□□□ -0.61
CIRBP-238	ENST00000592412	RNASEK	Q6P5S7	137 aa	Known RBP	11.27	□□□□□ -0.61
CIRBP-238	ENST00000592412		Q6ZRP5	223 aa		11.27	□□□□□ -0.61
CIRBP-238	ENST00000592412	LINC00474	Q9P2X8	69 aa		11.27	□□□□□ -0.61
CIRBP-238	ENST00000592412		C9JQL5	133 aa		11.26	□□□□□ -0.61
CIRBP-238	ENST00000592412	GATC	O43716	136 aa	Known RBP	11.26	□□□□□ -0.61
CIRBP-238	ENST00000592412	XCL1	P47992	114 aa		11.26	□□□□□ -0.61

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