RNA–Protein interactions for RNA: ENST00000592234.5

CIRBP-237, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-237ENST00000592234 WDR73Q6P4I2 378 aa11.92□□□□□ -0.5
CIRBP-237ENST00000592234 CLPSL2Q6UWE3 100 aa11.92□□□□□ -0.5
CIRBP-237ENST00000592234 FAM231DQ6ZW35 169 aa11.92□□□□□ -0.5
CIRBP-237ENST00000592234 LINC01551Q86U37 167 aa11.91□□□□□ -0.5
CIRBP-237ENST00000592234 CNFNQ9BYD5 112 aa11.91□□□□□ -0.5
CIRBP-237ENST00000592234 IGHV1-24A0A0C4DH33 117 aa11.9□□□□□ -0.5
CIRBP-237ENST00000592234 A8MWL6 223 aa11.9□□□□□ -0.5
CIRBP-237ENST00000592234 RBX1P62877 108 aa11.9□□□□□ -0.5
CIRBP-237ENST00000592234 NIT2Q9NQR4 276 aa11.9□□□□□ -0.5
CIRBP-237ENST00000592234 SMIM15Q7Z3B0 74 aa11.89□□□□□ -0.51
CIRBP-237ENST00000592234 LINC00269Q8N2A0 174 aa11.89□□□□□ -0.51
CIRBP-237ENST00000592234 GATD1Q8NB37 220 aa11.89□□□□□ -0.51
CIRBP-237ENST00000592234 PRR34Q9NV39 138 aa11.89□□□□□ -0.51
CIRBP-237ENST00000592234 PRSS1P07477 247 aa11.88□□□□□ -0.51
CIRBP-237ENST00000592234 KRTAP10-4P60372 401 aaPredicted RBP11.88□□□□□ -0.51
CIRBP-237ENST00000592234 IQCJQ1A5X6 159 aa11.88□□□□□ -0.51
CIRBP-237ENST00000592234 TEX261Q6UWH6 196 aa11.88□□□□□ -0.51
CIRBP-237ENST00000592234 RPL39LQ96EH5 51 aaKnown RBP11.88□□□□□ -0.51
CIRBP-237ENST00000592234 LRP1Q07954 4544 aaKnown RBP11.87□□□□□ -0.51
CIRBP-237ENST00000592234 C9JQL5 133 aa11.87□□□□□ -0.51
CIRBP-237ENST00000592234 SRSF3P84103 164 aaKnown RBP11.87□□□□□ -0.51
CIRBP-237ENST00000592234 CT83Q5H943 113 aa11.87□□□□□ -0.51
CIRBP-237ENST00000592234 DGAT2L7PQ6IED9 249 aa11.87□□□□□ -0.51
CIRBP-237ENST00000592234 NDUFS6O75380 124 aaKnown RBP11.86□□□□□ -0.51
CIRBP-237ENST00000592234 BORCS7Q96B45 105 aa11.86□□□□□ -0.51
CIRBP-237ENST00000592234 TMEM243Q9BU79 118 aa11.86□□□□□ -0.51
CIRBP-237ENST00000592234 FAT3Q8TDW7 4589 aa11.85□□□□□ -0.51
CIRBP-237ENST00000592234 HIGD1CA8MV81 97 aa11.85□□□□□ -0.51
CIRBP-237ENST00000592234 REG3AQ06141 175 aa11.85□□□□□ -0.51
CIRBP-237ENST00000592234 COTL1Q14019 142 aa11.85□□□□□ -0.51
CIRBP-237ENST00000592234 KRTAP26-1Q6PEX3 210 aa11.85□□□□□ -0.51
CIRBP-237ENST00000592234 C9orf163Q8N9P6 203 aa11.85□□□□□ -0.51
CIRBP-237ENST00000592234 TSKUQ8WUA8 353 aa11.85□□□□□ -0.51
CIRBP-237ENST00000592234 OSTCQ9NRP0 149 aa11.85□□□□□ -0.51
CIRBP-237ENST00000592234 AMTP48728 403 aa11.84□□□□□ -0.51
CIRBP-237ENST00000592234 ADIRFQ15847 76 aa11.84□□□□□ -0.51
CIRBP-237ENST00000592234 TMEM241Q24JQ0 296 aa11.84□□□□□ -0.51
CIRBP-237ENST00000592234 IGLV4-60A0A075B6I1 120 aa11.83□□□□□ -0.52
CIRBP-237ENST00000592234 IGLV10-54A0A075B6I4 117 aa11.83□□□□□ -0.52
CIRBP-237ENST00000592234 UBE2L6O14933 153 aa11.83□□□□□ -0.52
CIRBP-237ENST00000592234 RPL37AP61513 92 aaKnown RBP11.83□□□□□ -0.52
CIRBP-237ENST00000592234 RPL23P62829 140 aaKnown RBP11.83□□□□□ -0.52
CIRBP-237ENST00000592234 ISOC2Q96AB3 205 aa11.83□□□□□ -0.52
CIRBP-237ENST00000592234 V9GYV3 84 aa11.83□□□□□ -0.52
CIRBP-237ENST00000592234 PKHD1L1Q86WI1 4243 aa11.82□□□□□ -0.52
CIRBP-237ENST00000592234 A0A1B0GUT8 65 aa11.82□□□□□ -0.52
CIRBP-237ENST00000592234 GAS8-AS1O95177 125 aa11.82□□□□□ -0.52
CIRBP-237ENST00000592234 PEA15Q15121 130 aa11.82□□□□□ -0.52
CIRBP-237ENST00000592234 C20orf203Q8NBC4 194 aa11.82□□□□□ -0.52
CIRBP-237ENST00000592234 CLRN3Q8NCR9 226 aa11.82□□□□□ -0.52
CIRBP-237ENST00000592234 GFRA4Q9GZZ7 299 aa11.82□□□□□ -0.52
CIRBP-237ENST00000592234 TRAV8-4A0A0B4J246 113 aa11.81□□□□□ -0.52
CIRBP-237ENST00000592234 OXTP01178 125 aa11.81□□□□□ -0.52
CIRBP-237ENST00000592234 FAM74A3Q4VXF1 159 aa11.81□□□□□ -0.52
CIRBP-237ENST00000592234 NAT8Q9UHE5 227 aa11.81□□□□□ -0.52
CIRBP-237ENST00000592234 A0A1B0GUV1 79 aa11.8□□□□□ -0.52
CIRBP-237ENST00000592234 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.8□□□□□ -0.52
CIRBP-237ENST00000592234 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.79□□□□□ -0.52
CIRBP-237ENST00000592234 hDV102S1A0JD36 115 aa11.79□□□□□ -0.52
CIRBP-237ENST00000592234 IGKV2-29A2NJV5 120 aaPredicted RBP11.79□□□□□ -0.52
CIRBP-237ENST00000592234 SDHAF1A6NFY7 115 aa11.79□□□□□ -0.52
CIRBP-237ENST00000592234 AMN1Q8IY45 258 aa11.79□□□□□ -0.52
CIRBP-237ENST00000592234 NUP35Q8NFH5 326 aa11.79□□□□□ -0.52
CIRBP-237ENST00000592234 IGKV3OR2-268A0A0C4DH90 116 aa11.78□□□□□ -0.52
CIRBP-237ENST00000592234 APCSP02743 223 aa11.78□□□□□ -0.52
CIRBP-237ENST00000592234 SERTAD4-AS1Q5TG53 156 aa11.78□□□□□ -0.52
CIRBP-237ENST00000592234 SDIM1Q6ZPB5 146 aa11.78□□□□□ -0.52
CIRBP-237ENST00000592234 RNF185Q96GF1 192 aa11.78□□□□□ -0.52
CIRBP-237ENST00000592234 TMEM191AQ9H0A3 160 aa11.78□□□□□ -0.52
CIRBP-237ENST00000592234 FAM231BA6NCW3 169 aa11.77□□□□□ -0.53
CIRBP-237ENST00000592234 SMKR1H3BMG3 65 aa11.77□□□□□ -0.53
CIRBP-237ENST00000592234 PMCHP20382 165 aa11.77□□□□□ -0.53
CIRBP-237ENST00000592234 CNBPP62633 177 aaKnown RBP11.77□□□□□ -0.53
CIRBP-237ENST00000592234 RIGQ13278 110 aa11.77□□□□□ -0.53
CIRBP-237ENST00000592234 AP5S1Q9NUS5 200 aa11.77□□□□□ -0.53
CIRBP-237ENST00000592234 PANO1I0J062 215 aa11.76□□□□□ -0.53
CIRBP-237ENST00000592234 NCR2O95944 276 aa11.76□□□□□ -0.53
CIRBP-237ENST00000592234 RAB4AP20338 218 aa11.76□□□□□ -0.53
CIRBP-237ENST00000592234 RPS10P46783 165 aaKnown RBP11.76□□□□□ -0.53
CIRBP-237ENST00000592234 AMMECR1LQ6DCA0 310 aa11.76□□□□□ -0.53
CIRBP-237ENST00000592234 RNASEKQ6P5S7 137 aaKnown RBP11.76□□□□□ -0.53
CIRBP-237ENST00000592234 ST20Q9HBF5 79 aa11.76□□□□□ -0.53
CIRBP-237ENST00000592234 NAT8BQ9UHF3 227 aa11.76□□□□□ -0.53
CIRBP-237ENST00000592234 TMEM242Q9NWH2 141 aa11.75□□□□□ -0.53
CIRBP-237ENST00000592234 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.74□□□□□ -0.53
CIRBP-237ENST00000592234 I3L3M4 83 aa11.74□□□□□ -0.53
CIRBP-237ENST00000592234 HNRNPA3P51991 378 aaKnown RBP11.74□□□□□ -0.53
CIRBP-237ENST00000592234 IGHV3-64A0A075B6Q5 118 aa11.73□□□□□ -0.53
CIRBP-237ENST00000592234 TRBV6-5A0A0K0K1A5 114 aa11.73□□□□□ -0.53
CIRBP-237ENST00000592234 CAMPP49913 170 aa11.73□□□□□ -0.53
CIRBP-237ENST00000592234 SMDT1Q9H4I9 107 aa11.73□□□□□ -0.53
CIRBP-237ENST00000592234 SMIM27A0A1W2PRY6 76 aa11.72□□□□□ -0.53
CIRBP-237ENST00000592234 FGF6P10767 208 aa11.72□□□□□ -0.53
CIRBP-237ENST00000592234 DPH3Q96FX2 82 aa11.72□□□□□ -0.53
CIRBP-237ENST00000592234 MRAP2Q96G30 205 aa11.72□□□□□ -0.53
CIRBP-237ENST00000592234 TSHBP01222 138 aa11.71□□□□□ -0.53
CIRBP-237ENST00000592234 CIRBPQ14011 172 aaKnown RBP11.71□□□□□ -0.53
CIRBP-237ENST00000592234 MRPL54Q6P161 138 aaKnown RBP11.71□□□□□ -0.53
CIRBP-237ENST00000592234 HMCN2Q8NDA2 5059 aa11.71□□□□□ -0.54
CIRBP-237ENST00000592234 GAGE12HA6NDE8 117 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms