RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 BAGE3Q86Y29 109 aa7.51□□□□□ -1.21
SMAD4-214ENST00000592186 SLC25A29Q8N8R3 303 aa7.51□□□□□ -1.21
SMAD4-214ENST00000592186 GATD1Q8NB37 220 aa7.51□□□□□ -1.21
SMAD4-214ENST00000592186 ST20Q9HBF5 79 aa7.51□□□□□ -1.21
SMAD4-214ENST00000592186 TRAV9-2A0A087WT02 112 aa7.5□□□□□ -1.21
SMAD4-214ENST00000592186 TRAV26-1A0A087WT03 109 aa7.5□□□□□ -1.21
SMAD4-214ENST00000592186 C3orf84H3BNL1 204 aa7.5□□□□□ -1.21
SMAD4-214ENST00000592186 PPP1R17O96001 155 aa7.5□□□□□ -1.21
SMAD4-214ENST00000592186 MGPP08493 103 aa7.5□□□□□ -1.21
SMAD4-214ENST00000592186 RHOHQ15669 191 aa7.5□□□□□ -1.21
SMAD4-214ENST00000592186 ZNF56Q15929 161 aa7.5□□□□□ -1.21
SMAD4-214ENST00000592186 FAM104BQ5XKR9 115 aa7.5□□□□□ -1.21
SMAD4-214ENST00000592186 SH2D6Q7Z4S9 175 aa7.5□□□□□ -1.21
SMAD4-214ENST00000592186 MRAP2Q96G30 205 aa7.5□□□□□ -1.21
SMAD4-214ENST00000592186 HUWE1Q7Z6Z7 4374 aaKnown RBP7.5□□□□□ -1.21
SMAD4-214ENST00000592186 CFAP161Q6P656 301 aa7.49□□□□□ -1.21
SMAD4-214ENST00000592186 C15orf53Q8NAA6 179 aa7.49□□□□□ -1.21
SMAD4-214ENST00000592186 MRPL18Q9H0U6 180 aaKnown RBP7.49□□□□□ -1.21
SMAD4-214ENST00000592186 IGLL5B9A064 214 aa7.48□□□□□ -1.21
SMAD4-214ENST00000592186 K7EQD1 137 aa7.48□□□□□ -1.21
SMAD4-214ENST00000592186 M0QY20 66 aa7.48□□□□□ -1.21
SMAD4-214ENST00000592186 NUPR1O60356 82 aa7.48□□□□□ -1.21
SMAD4-214ENST00000592186 HLA-DQA1P01909 254 aa7.48□□□□□ -1.21
SMAD4-214ENST00000592186 AMTP48728 403 aa7.48□□□□□ -1.21
SMAD4-214ENST00000592186 KRTDAPP60985 99 aa7.48□□□□□ -1.21
SMAD4-214ENST00000592186 MRPL23Q16540 153 aaKnown RBP7.48□□□□□ -1.21
SMAD4-214ENST00000592186 Q6ZSN1 163 aa7.48□□□□□ -1.21
SMAD4-214ENST00000592186 DNAJC30Q96LL9 226 aa7.48□□□□□ -1.21
SMAD4-214ENST00000592186 HINT1P49773 126 aaPredicted RBP7.47□□□□□ -1.21
SMAD4-214ENST00000592186 RPL36AP83881 106 aaKnown RBP7.47□□□□□ -1.21
SMAD4-214ENST00000592186 LCE2CQ5TA81 110 aa7.47□□□□□ -1.21
SMAD4-214ENST00000592186 SUMO4Q6EEV6 95 aa7.47□□□□□ -1.21
SMAD4-214ENST00000592186 TMEM136Q6ZRR5 245 aa7.47□□□□□ -1.21
SMAD4-214ENST00000592186 GTF2H5Q6ZYL4 71 aa7.47□□□□□ -1.21
SMAD4-214ENST00000592186 AMN1Q8IY45 258 aa7.47□□□□□ -1.21
SMAD4-214ENST00000592186 RPL36ALQ969Q0 106 aaKnown RBP7.47□□□□□ -1.21
SMAD4-214ENST00000592186 VSIG2Q96IQ7 327 aa7.47□□□□□ -1.21
SMAD4-214ENST00000592186 PMCHL2Q9BQD1 86 aa7.47□□□□□ -1.21
SMAD4-214ENST00000592186 TNFRSF18Q9Y5U5 241 aa7.47□□□□□ -1.21
SMAD4-214ENST00000592186 ICOSQ9Y6W8 199 aa7.47□□□□□ -1.21
SMAD4-214ENST00000592186 TRBV7-3A0A075B6L6 115 aa7.46□□□□□ -1.22
SMAD4-214ENST00000592186 A0A0J9YY99 117 aa7.46□□□□□ -1.22
SMAD4-214ENST00000592186 TAX1BP3O14907 124 aa7.46□□□□□ -1.22
SMAD4-214ENST00000592186 APCSP02743 223 aa7.46□□□□□ -1.22
SMAD4-214ENST00000592186 GYPEP15421 78 aa7.46□□□□□ -1.22
SMAD4-214ENST00000592186 CKS2P33552 79 aa7.46□□□□□ -1.22
SMAD4-214ENST00000592186 MRPL51Q4U2R6 128 aaKnown RBP7.46□□□□□ -1.22
SMAD4-214ENST00000592186 RNF185Q96GF1 192 aa7.46□□□□□ -1.22
SMAD4-214ENST00000592186 C3orf79P0CE67 100 aa7.45□□□□□ -1.22
SMAD4-214ENST00000592186 SRIP30626 198 aa7.45□□□□□ -1.22
SMAD4-214ENST00000592186 SEC11AP67812 179 aa7.45□□□□□ -1.22
SMAD4-214ENST00000592186 ORMDL3Q8N138 153 aa7.45□□□□□ -1.22
SMAD4-214ENST00000592186 MTURNQ8N3F0 131 aa7.45□□□□□ -1.22
SMAD4-214ENST00000592186 OR5A1Q8NGJ0 315 aa7.45□□□□□ -1.22
SMAD4-214ENST00000592186 TRBV6-5A0A0K0K1A5 114 aa7.44□□□□□ -1.22
SMAD4-214ENST00000592186 NUDT3O95989 172 aa7.44□□□□□ -1.22
SMAD4-214ENST00000592186 ZFAND6Q6FIF0 208 aa7.44□□□□□ -1.22
SMAD4-214ENST00000592186 NEGR1Q7Z3B1 354 aa7.44□□□□□ -1.22
SMAD4-214ENST00000592186 DAZ4Q86SG3 579 aaKnown RBP7.44□□□□□ -1.22
SMAD4-214ENST00000592186 ZNRF2Q8NHG8 242 aa7.44□□□□□ -1.22
SMAD4-214ENST00000592186 DAZ3Q9NR90 486 aaKnown RBP7.44□□□□□ -1.22
SMAD4-214ENST00000592186 A0A096LPF7 62 aa7.43□□□□□ -1.22
SMAD4-214ENST00000592186 TRAV26-2A0A0B4J265 109 aa7.43□□□□□ -1.22
SMAD4-214ENST00000592186 GAGE12JA6NER3 117 aa7.43□□□□□ -1.22
SMAD4-214ENST00000592186 GAGE4Q13068 117 aa7.43□□□□□ -1.22
SMAD4-214ENST00000592186 GAGE5Q13069 117 aa7.43□□□□□ -1.22
SMAD4-214ENST00000592186 GAGE13Q4V321 117 aa7.43□□□□□ -1.22
SMAD4-214ENST00000592186 BVES-AS1Q5T3Y7 98 aa7.43□□□□□ -1.22
SMAD4-214ENST00000592186 CASC10Q5T4H9 136 aa7.43□□□□□ -1.22
SMAD4-214ENST00000592186 NEXN-AS1Q8NBZ9 246 aa7.43□□□□□ -1.22
SMAD4-214ENST00000592186 ATP6V0E2Q8NHE4 81 aa7.43□□□□□ -1.22
SMAD4-214ENST00000592186 C20orf78Q9BR46 151 aa7.43□□□□□ -1.22
SMAD4-214ENST00000592186 APLNQ9ULZ1 77 aa7.43□□□□□ -1.22
SMAD4-214ENST00000592186 D6R8Y8 96 aa7.42□□□□□ -1.22
SMAD4-214ENST00000592186 P0DMU3 169 aa7.42□□□□□ -1.22
SMAD4-214ENST00000592186 FAM231AP0DMU4 169 aa7.42□□□□□ -1.22
SMAD4-214ENST00000592186 FAM231CP0DMU5 169 aa7.42□□□□□ -1.22
SMAD4-214ENST00000592186 TIRAPP58753 221 aa7.42□□□□□ -1.22
SMAD4-214ENST00000592186 UBE2D3P61077 147 aa7.42□□□□□ -1.22
SMAD4-214ENST00000592186 UBE2D2P62837 147 aa7.42□□□□□ -1.22
SMAD4-214ENST00000592186 TMEM97Q5BJF2 176 aa7.42□□□□□ -1.22
SMAD4-214ENST00000592186 PRELID3AQ96N28 172 aa7.42□□□□□ -1.22
SMAD4-214ENST00000592186 LOC100131303A0A0U1RQF7 123 aa7.41□□□□□ -1.22
SMAD4-214ENST00000592186 VCYO14598 125 aa7.41□□□□□ -1.22
SMAD4-214ENST00000592186 TNFRSF6BO95407 300 aa7.41□□□□□ -1.22
SMAD4-214ENST00000592186 PMCHP20382 165 aa7.41□□□□□ -1.22
SMAD4-214ENST00000592186 CCL18P55774 89 aa7.41□□□□□ -1.22
SMAD4-214ENST00000592186 SLC25A34Q6PIV7 304 aa7.41□□□□□ -1.22
SMAD4-214ENST00000592186 NRACQ8N912 160 aa7.41□□□□□ -1.22
SMAD4-214ENST00000592186 GTSF1LQ9H1H1 148 aa7.41□□□□□ -1.22
SMAD4-214ENST00000592186 Q9UF83 564 aa7.41□□□□□ -1.22
SMAD4-214ENST00000592186 SMKR1H3BMG3 65 aa7.4□□□□□ -1.22
SMAD4-214ENST00000592186 LINC00694P0DN24 101 aa7.4□□□□□ -1.22
SMAD4-214ENST00000592186 SUMO2P61956 95 aaKnown RBP7.4□□□□□ -1.22
SMAD4-214ENST00000592186 RPL32P62910 135 aaKnown RBP7.4□□□□□ -1.22
SMAD4-214ENST00000592186 LYPD5Q6UWN5 251 aa7.4□□□□□ -1.22
SMAD4-214ENST00000592186 RPL39LQ96EH5 51 aaKnown RBP7.4□□□□□ -1.22
SMAD4-214ENST00000592186 TRBV27A0A0K0K1C4 114 aa7.39□□□□□ -1.23
SMAD4-214ENST00000592186 SDHAF1A6NFY7 115 aa7.39□□□□□ -1.23
SMAD4-214ENST00000592186 I3L3M4 83 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms