RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 C19orf73Q9NVV2 129 aa11.37□□□□□ -0.59
MBD1-227ENST00000592060 NF1P21359 2839 aa11.37□□□□□ -0.59
MBD1-227ENST00000592060 H3BUT2 72 aa11.37□□□□□ -0.59
MBD1-227ENST00000592060 GIG44P09565 113 aaPredicted RBP11.37□□□□□ -0.59
MBD1-227ENST00000592060 SMIM13P0DJ93 91 aa11.37□□□□□ -0.59
MBD1-227ENST00000592060 FAM104AQ969W3 186 aa11.37□□□□□ -0.59
MBD1-227ENST00000592060 RAB37Q96AX2 223 aa11.37□□□□□ -0.59
MBD1-227ENST00000592060 DNAJC30Q96LL9 226 aa11.37□□□□□ -0.59
MBD1-227ENST00000592060 PYGO1Q9Y3Y4 419 aa11.37□□□□□ -0.59
MBD1-227ENST00000592060 IGHV3OR16-12A0A075B7B8 117 aa11.36□□□□□ -0.59
MBD1-227ENST00000592060 ZNF815PA8K554 130 aa11.36□□□□□ -0.59
MBD1-227ENST00000592060 NAA38Q9BRA0 125 aaKnown RBP11.36□□□□□ -0.59
MBD1-227ENST00000592060 LY6G6DO95868 133 aa11.36□□□□□ -0.59
MBD1-227ENST00000592060 KRTAP10-3P60369 221 aa11.36□□□□□ -0.59
MBD1-227ENST00000592060 CHCHD7Q9BUK0 85 aa11.36□□□□□ -0.59
MBD1-227ENST00000592060 K7ERJ3 54 aa11.35□□□□□ -0.59
MBD1-227ENST00000592060 TSPEAR-AS2P59090 65 aa11.35□□□□□ -0.59
MBD1-227ENST00000592060 TMEM170BQ5T4T1 132 aa11.35□□□□□ -0.59
MBD1-227ENST00000592060 PLEKHB2Q96CS7 222 aa11.35□□□□□ -0.59
MBD1-227ENST00000592060 HIST1H4GQ99525 98 aa11.35□□□□□ -0.59
MBD1-227ENST00000592060 WFDC10AQ9H1F0 79 aa11.35□□□□□ -0.59
MBD1-227ENST00000592060 TMEM263Q8WUH6 116 aaKnown RBP11.34□□□□□ -0.59
MBD1-227ENST00000592060 AMELXQ99217 191 aa11.34□□□□□ -0.59
MBD1-227ENST00000592060 NHP2Q9NX24 153 aaKnown RBP11.34□□□□□ -0.59
MBD1-227ENST00000592060 A0A1W2PPM0 123 aa11.33□□□□□ -0.6
MBD1-227ENST00000592060 OTOGQ6ZRI0 2925 aa11.33□□□□□ -0.6
MBD1-227ENST00000592060 TRGV1A0A0A0MS02 117 aa11.32□□□□□ -0.6
MBD1-227ENST00000592060 TMEM223A0PJW6 202 aa11.32□□□□□ -0.6
MBD1-227ENST00000592060 ZNF22P17026 224 aaPredicted RBP11.32□□□□□ -0.6
MBD1-227ENST00000592060 CRYBA4P53673 196 aa11.32□□□□□ -0.6
MBD1-227ENST00000592060 NDUFA11Q86Y39 141 aa11.32□□□□□ -0.6
MBD1-227ENST00000592060 VCX2Q9H322 139 aa11.32□□□□□ -0.6
MBD1-227ENST00000592060 MTORP42345 2549 aa11.32□□□□□ -0.6
MBD1-227ENST00000592060 K7EP34 96 aa11.32□□□□□ -0.6
MBD1-227ENST00000592060 A0A0J9YXV3 536 aa11.31□□□□□ -0.6
MBD1-227ENST00000592060 A0A1B0GWB2 263 aa11.31□□□□□ -0.6
MBD1-227ENST00000592060 GAGE10A6NGK3 116 aa11.31□□□□□ -0.6
MBD1-227ENST00000592060 Q6ZTI0 123 aa11.31□□□□□ -0.6
MBD1-227ENST00000592060 SPANXA1Q9NS26 97 aa11.31□□□□□ -0.6
MBD1-227ENST00000592060 UBE2D4Q9Y2X8 147 aa11.31□□□□□ -0.6
MBD1-227ENST00000592060 PLAC8L1A1L4L8 177 aa11.3□□□□□ -0.6
MBD1-227ENST00000592060 C12orf74Q32Q52 190 aa11.3□□□□□ -0.6
MBD1-227ENST00000592060 CEMP1Q6PRD7 247 aaPredicted RBP11.3□□□□□ -0.6
MBD1-227ENST00000592060 OR5A1Q8NGJ0 315 aa11.3□□□□□ -0.6
MBD1-227ENST00000592060 ZNF479Q96JC4 524 aa11.3□□□□□ -0.6
MBD1-227ENST00000592060 TRAV4A0A0B4J268 109 aa11.3□□□□□ -0.6
MBD1-227ENST00000592060 IGHV3-38A0A0C4DH36 116 aa11.3□□□□□ -0.6
MBD1-227ENST00000592060 A0A0J9YY99 117 aa11.3□□□□□ -0.6
MBD1-227ENST00000592060 J3QQQ9 107 aa11.3□□□□□ -0.6
MBD1-227ENST00000592060 RPL35AP18077 110 aaKnown RBP11.3□□□□□ -0.6
MBD1-227ENST00000592060 SAMD5Q5TGI4 173 aa11.3□□□□□ -0.6
MBD1-227ENST00000592060 SCGB1D4Q6XE38 83 aa11.3□□□□□ -0.6
MBD1-227ENST00000592060 GTF2H5Q6ZYL4 71 aa11.3□□□□□ -0.6
MBD1-227ENST00000592060 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.29□□□□□ -0.6
MBD1-227ENST00000592060 IGKV2-29A2NJV5 120 aaPredicted RBP11.29□□□□□ -0.6
MBD1-227ENST00000592060 LEPROTO15243 131 aa11.29□□□□□ -0.6
MBD1-227ENST00000592060 MRPS36P82909 103 aaKnown RBP11.29□□□□□ -0.6
MBD1-227ENST00000592060 DAZ2Q13117 558 aaKnown RBP11.29□□□□□ -0.6
MBD1-227ENST00000592060 COTL1Q14019 142 aa11.29□□□□□ -0.6
MBD1-227ENST00000592060 CSNK1G2-AS1Q8NCQ2 148 aa11.29□□□□□ -0.6
MBD1-227ENST00000592060 LINC00482Q8N8I6 264 aa11.28□□□□□ -0.6
MBD1-227ENST00000592060 C16orf74Q96GX8 76 aa11.28□□□□□ -0.6
MBD1-227ENST00000592060 SPANXB1Q9NS25 103 aaPredicted RBP11.28□□□□□ -0.6
MBD1-227ENST00000592060 IGLL5B9A064 214 aa11.27□□□□□ -0.61
MBD1-227ENST00000592060 K7EQD1 137 aa11.27□□□□□ -0.61
MBD1-227ENST00000592060 FABP2P12104 132 aa11.27□□□□□ -0.61
MBD1-227ENST00000592060 NOP10Q9NPE3 64 aaKnown RBP11.27□□□□□ -0.61
MBD1-227ENST00000592060 SPCS1Q9Y6A9 102 aa11.27□□□□□ -0.61
MBD1-227ENST00000592060 HIVEP2P31629 2446 aa11.27□□□□□ -0.61
MBD1-227ENST00000592060 TRBV10-1A0A0K0K1A3 114 aa11.27□□□□□ -0.61
MBD1-227ENST00000592060 LGALS3P17931 250 aaKnown RBP11.27□□□□□ -0.61
MBD1-227ENST00000592060 RNASE13Q5GAN3 156 aaKnown RBP11.27□□□□□ -0.61
MBD1-227ENST00000592060 Q6ZUT4 128 aa11.27□□□□□ -0.61
MBD1-227ENST00000592060 C1QTNF4Q9BXJ3 329 aa11.27□□□□□ -0.61
MBD1-227ENST00000592060 F8P00451 2351 aa11.26□□□□□ -0.61
MBD1-227ENST00000592060 GAGE12BA1L429 117 aa11.25□□□□□ -0.61
MBD1-227ENST00000592060 PF4P02776 101 aa11.25□□□□□ -0.61
MBD1-227ENST00000592060 TIMM21Q9BVV7 248 aa11.25□□□□□ -0.61
MBD1-227ENST00000592060 INAFM1C9JVW0 142 aa11.25□□□□□ -0.61
MBD1-227ENST00000592060 SLC25A29Q8N8R3 303 aa11.25□□□□□ -0.61
MBD1-227ENST00000592060 SETD2Q9BYW2 2564 aaPredicted RBP11.25□□□□□ -0.61
MBD1-227ENST00000592060 TINCRA0A1B0GVN0 87 aa11.24□□□□□ -0.61
MBD1-227ENST00000592060 UBE2D1P51668 147 aa11.24□□□□□ -0.61
MBD1-227ENST00000592060 SRSF9Q13242 221 aaKnown RBP eCLIP11.24□□□□□ -0.61
MBD1-227ENST00000592060 OVOL2Q9BRP0 275 aa11.24□□□□□ -0.61
MBD1-227ENST00000592060 IGHV3-64A0A075B6Q5 118 aa11.23□□□□□ -0.61
MBD1-227ENST00000592060 UBE2D3P61077 147 aa11.23□□□□□ -0.61
MBD1-227ENST00000592060 UBE2D2P62837 147 aa11.23□□□□□ -0.61
MBD1-227ENST00000592060 RPL36AP83881 106 aaKnown RBP11.23□□□□□ -0.61
MBD1-227ENST00000592060 RPL36ALQ969Q0 106 aaKnown RBP11.23□□□□□ -0.61
MBD1-227ENST00000592060 TMEM238LA0A1B0GVL6 79 aa11.23□□□□□ -0.61
MBD1-227ENST00000592060 A6NJY4 79 aa11.23□□□□□ -0.61
MBD1-227ENST00000592060 IGHV3-30P01768 117 aa11.23□□□□□ -0.61
MBD1-227ENST00000592060 IGHV3-30-5P0DP03 117 aa11.23□□□□□ -0.61
MBD1-227ENST00000592060 RRN3P1Q2M238 152 aa11.23□□□□□ -0.61
MBD1-227ENST00000592060 IGHV3-30-3P0DP02 117 aa11.21□□□□□ -0.61
MBD1-227ENST00000592060 NTM-AS1Q6ZSK4 140 aa11.21□□□□□ -0.61
MBD1-227ENST00000592060 DAZ4Q86SG3 579 aaKnown RBP11.21□□□□□ -0.61
MBD1-227ENST00000592060 DAZ3Q9NR90 486 aaKnown RBP11.21□□□□□ -0.61
MBD1-227ENST00000592060 GAGE7O76087 117 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms