RNA–Protein interactions for RNA: ENST00000591055.5

CIRBP-230, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 928 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-230ENST00000591055 NIT2Q9NQR4 276 aa10.04□□□□□ -0.8
CIRBP-230ENST00000591055 TRAV1-1A0A0B4J248 108 aa10.03□□□□□ -0.8
CIRBP-230ENST00000591055 RAB19A4D1S5 217 aa10.03□□□□□ -0.8
CIRBP-230ENST00000591055 EIF5AL1Q6IS14 154 aaKnown RBP10.03□□□□□ -0.8
CIRBP-230ENST00000591055 WDR73Q6P4I2 378 aa10.03□□□□□ -0.8
CIRBP-230ENST00000591055 LYZL1Q6UWQ5 148 aa10.03□□□□□ -0.8
CIRBP-230ENST00000591055 Q6ZRU5 148 aa10.03□□□□□ -0.8
CIRBP-230ENST00000591055 RNF185Q96GF1 192 aa10.03□□□□□ -0.8
CIRBP-230ENST00000591055 DPH3P1Q9H4G8 78 aa10.03□□□□□ -0.8
CIRBP-230ENST00000591055 IFNA1P01562 189 aa10.02□□□□□ -0.81
CIRBP-230ENST00000591055 SLPIP03973 132 aa10.02□□□□□ -0.81
CIRBP-230ENST00000591055 AMTP48728 403 aa10.02□□□□□ -0.81
CIRBP-230ENST00000591055 SULT1A2P50226 295 aa10.02□□□□□ -0.81
CIRBP-230ENST00000591055 COTL1Q14019 142 aa10.02□□□□□ -0.81
CIRBP-230ENST00000591055 SLC51BQ86UW2 128 aa10.02□□□□□ -0.81
CIRBP-230ENST00000591055 SMIM12Q96EX1 92 aa10.02□□□□□ -0.81
CIRBP-230ENST00000591055 A0A087WYN8 130 aa10.01□□□□□ -0.81
CIRBP-230ENST00000591055 TEX46H3BTG2 121 aa10.01□□□□□ -0.81
CIRBP-230ENST00000591055 CHTF8P0CG12 524 aa10.01□□□□□ -0.81
CIRBP-230ENST00000591055 MT1HL1P0DM35 61 aa10.01□□□□□ -0.81
CIRBP-230ENST00000591055 NTF3P20783 257 aa10.01□□□□□ -0.81
CIRBP-230ENST00000591055 C9orf62Q8N4C0 152 aa10.01□□□□□ -0.81
CIRBP-230ENST00000591055 SPACA4Q8TDM5 124 aa10□□□□□ -0.81
CIRBP-230ENST00000591055 BIN3Q9NQY0 253 aa10□□□□□ -0.81
CIRBP-230ENST00000591055 MED9Q9NWA0 146 aa10□□□□□ -0.81
CIRBP-230ENST00000591055 GAGE12HA6NDE8 117 aa9.99□□□□□ -0.81
CIRBP-230ENST00000591055 PDE6DO43924 150 aa9.99□□□□□ -0.81
CIRBP-230ENST00000591055 MEF2BQ02080 365 aaPredicted RBP9.99□□□□□ -0.81
CIRBP-230ENST00000591055 CFAP161Q6P656 301 aa9.99□□□□□ -0.81
CIRBP-230ENST00000591055 IGKV3OR2-268A0A0C4DH90 116 aa9.98□□□□□ -0.81
CIRBP-230ENST00000591055 CTRLP40313 264 aa9.98□□□□□ -0.81
CIRBP-230ENST00000591055 C15orf56Q8N910 161 aa9.98□□□□□ -0.81
CIRBP-230ENST00000591055 TRBV20OR9-2A0A075B6H5 130 aa9.97□□□□□ -0.81
CIRBP-230ENST00000591055 TWIST1Q15672 202 aa9.97□□□□□ -0.81
CIRBP-230ENST00000591055 NUDT10Q8NFP7 164 aa9.97□□□□□ -0.81
CIRBP-230ENST00000591055 NUDT11Q96G61 164 aa9.97□□□□□ -0.81
CIRBP-230ENST00000591055 PLAC8Q9NZF1 115 aa9.97□□□□□ -0.81
CIRBP-230ENST00000591055 TNXBP22105 4242 aa9.97□□□□□ -0.81
CIRBP-230ENST00000591055 RPS10P46783 165 aaKnown RBP9.96□□□□□ -0.82
CIRBP-230ENST00000591055 COX6A2Q02221 97 aa9.96□□□□□ -0.82
CIRBP-230ENST00000591055 AMMECR1LQ6DCA0 310 aa9.96□□□□□ -0.82
CIRBP-230ENST00000591055 GATD1Q8NB37 220 aa9.96□□□□□ -0.82
CIRBP-230ENST00000591055 C7orf33Q8WU49 177 aa9.96□□□□□ -0.82
CIRBP-230ENST00000591055 TRAV26-2A0A0B4J265 109 aa9.95□□□□□ -0.82
CIRBP-230ENST00000591055 PHOX2AO14813 284 aa9.95□□□□□ -0.82
CIRBP-230ENST00000591055 BCL2P10415 239 aa9.95□□□□□ -0.82
CIRBP-230ENST00000591055 HIGD2BQ4VC39 106 aa9.95□□□□□ -0.82
CIRBP-230ENST00000591055 CNFNQ9BYD5 112 aa9.95□□□□□ -0.82
CIRBP-230ENST00000591055 MAJINQ3KP22 176 aa9.94□□□□□ -0.82
CIRBP-230ENST00000591055 RNASEKQ6P5S7 137 aaKnown RBP9.94□□□□□ -0.82
CIRBP-230ENST00000591055 CHCHD10Q8WYQ3 142 aaPredicted RBP9.94□□□□□ -0.82
CIRBP-230ENST00000591055 RPP21Q9H633 154 aaKnown RBP9.94□□□□□ -0.82
CIRBP-230ENST00000591055 IGKV2-24A0A0C4DH68 120 aa9.93□□□□□ -0.82
CIRBP-230ENST00000591055 NDUFS6O75380 124 aaKnown RBP9.93□□□□□ -0.82
CIRBP-230ENST00000591055 NCR2O95944 276 aa9.93□□□□□ -0.82
CIRBP-230ENST00000591055 SMIM15Q7Z3B0 74 aa9.93□□□□□ -0.82
CIRBP-230ENST00000591055 PRSS3P2Q8NHM4 247 aa9.93□□□□□ -0.82
CIRBP-230ENST00000591055 RNASE7Q9H1E1 156 aaKnown RBP9.93□□□□□ -0.82
CIRBP-230ENST00000591055 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.92□□□□□ -0.82
CIRBP-230ENST00000591055 IGKV2-29A2NJV5 120 aaPredicted RBP9.92□□□□□ -0.82
CIRBP-230ENST00000591055 H7C423 109 aa9.92□□□□□ -0.82
CIRBP-230ENST00000591055 APCSP02743 223 aa9.92□□□□□ -0.82
CIRBP-230ENST00000591055 GTSF1Q8WW33 167 aa9.92□□□□□ -0.82
CIRBP-230ENST00000591055 RPL39LQ96EH5 51 aaKnown RBP9.92□□□□□ -0.82
CIRBP-230ENST00000591055 FGF6P10767 208 aa9.91□□□□□ -0.82
CIRBP-230ENST00000591055 OCC1Q8TAD7 63 aa9.91□□□□□ -0.82
CIRBP-230ENST00000591055 GVQW2A0A096LPI5 108 aaPredicted RBP9.9□□□□□ -0.82
CIRBP-230ENST00000591055 K7EN84 100 aa9.9□□□□□ -0.82
CIRBP-230ENST00000591055 TAGLN2P37802 199 aaKnown RBP9.9□□□□□ -0.82
CIRBP-230ENST00000591055 FOXA3P55318 350 aaPredicted RBP9.9□□□□□ -0.82
CIRBP-230ENST00000591055 TEX261Q6UWH6 196 aa9.9□□□□□ -0.82
CIRBP-230ENST00000591055 STPG4Q8N801 248 aa9.9□□□□□ -0.82
CIRBP-230ENST00000591055 LRP2P98164 4655 aa9.89□□□□□ -0.83
CIRBP-230ENST00000591055 SDHAF1A6NFY7 115 aa9.89□□□□□ -0.83
CIRBP-230ENST00000591055 FOXI1Q12951 378 aa9.89□□□□□ -0.83
CIRBP-230ENST00000591055 LYPD6BQ8NI32 183 aa9.89□□□□□ -0.83
CIRBP-230ENST00000591055 ZNF25P17030 456 aaPredicted RBP9.88□□□□□ -0.83
CIRBP-230ENST00000591055 PMCHP20382 165 aa9.88□□□□□ -0.83
CIRBP-230ENST00000591055 PRR3P79522 188 aaKnown RBP9.88□□□□□ -0.83
CIRBP-230ENST00000591055 OR5A1Q8NGJ0 315 aa9.88□□□□□ -0.83
CIRBP-230ENST00000591055 BTF3L4Q96K17 158 aa9.88□□□□□ -0.83
CIRBP-230ENST00000591055 A0A096LNI7 61 aa9.87□□□□□ -0.83
CIRBP-230ENST00000591055 I3L3M4 83 aa9.87□□□□□ -0.83
CIRBP-230ENST00000591055 XCL1P47992 114 aa9.87□□□□□ -0.83
CIRBP-230ENST00000591055 TMEM101Q96IK0 257 aa9.87□□□□□ -0.83
CIRBP-230ENST00000591055 GATCO43716 136 aaKnown RBP9.86□□□□□ -0.83
CIRBP-230ENST00000591055 BLOC1S1P78537 153 aa9.86□□□□□ -0.83
CIRBP-230ENST00000591055 LINC01600Q96MT4 127 aa9.86□□□□□ -0.83
CIRBP-230ENST00000591055 LINC00474Q9P2X8 69 aa9.86□□□□□ -0.83
CIRBP-230ENST00000591055 PKIGQ9Y2B9 76 aa9.86□□□□□ -0.83
CIRBP-230ENST00000591055 IGHV1-58A0A0C4DH39 117 aa9.85□□□□□ -0.83
CIRBP-230ENST00000591055 TRBV6-5A0A0K0K1A5 114 aa9.85□□□□□ -0.83
CIRBP-230ENST00000591055 LINC00959A0A1B0GUT2 108 aa9.85□□□□□ -0.83
CIRBP-230ENST00000591055 FAM231BA6NCW3 169 aa9.85□□□□□ -0.83
CIRBP-230ENST00000591055 A8MWL6 223 aa9.85□□□□□ -0.83
CIRBP-230ENST00000591055 CCL25O15444 150 aa9.85□□□□□ -0.83
CIRBP-230ENST00000591055 ALKAL2Q6UX46 152 aa9.85□□□□□ -0.83
CIRBP-230ENST00000591055 LINC00526Q96FQ7 95 aa9.84□□□□□ -0.83
CIRBP-230ENST00000591055 CARD19Q96LW7 228 aa9.84□□□□□ -0.83
CIRBP-230ENST00000591055 ESDP10768 282 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms