RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 UBE2D3P61077 147 aa9.2□□□□□ -0.94
PTBP1-216ENST00000590887 UBE2D2P62837 147 aa9.2□□□□□ -0.94
PTBP1-216ENST00000590887 GAGE1Q13065 139 aa9.2□□□□□ -0.94
PTBP1-216ENST00000590887 GAGE4Q13068 117 aa9.2□□□□□ -0.94
PTBP1-216ENST00000590887 GAGE5Q13069 117 aa9.2□□□□□ -0.94
PTBP1-216ENST00000590887 GAGE13Q4V321 117 aa9.2□□□□□ -0.94
PTBP1-216ENST00000590887 ERASQ7Z444 233 aa9.2□□□□□ -0.94
PTBP1-216ENST00000590887 SPATA12Q7Z6I5 190 aa9.2□□□□□ -0.94
PTBP1-216ENST00000590887 SBSPONQ8IVN8 264 aa9.2□□□□□ -0.94
PTBP1-216ENST00000590887 GTSF1LQ9H1H1 148 aa9.2□□□□□ -0.94
PTBP1-216ENST00000590887 F5H768 121 aa9.19□□□□□ -0.94
PTBP1-216ENST00000590887 SYS1-DBNDD2H3BUS1 97 aa9.19□□□□□ -0.94
PTBP1-216ENST00000590887 P0DMU3 169 aa9.19□□□□□ -0.94
PTBP1-216ENST00000590887 FAM231AP0DMU4 169 aa9.19□□□□□ -0.94
PTBP1-216ENST00000590887 FAM231CP0DMU5 169 aa9.19□□□□□ -0.94
PTBP1-216ENST00000590887 CRYBA4P53673 196 aa9.19□□□□□ -0.94
PTBP1-216ENST00000590887 LINC00518Q8N0U6 118 aa9.19□□□□□ -0.94
PTBP1-216ENST00000590887 A0A096LNJ9 63 aa9.18□□□□□ -0.94
PTBP1-216ENST00000590887 TSHBP01222 138 aa9.18□□□□□ -0.94
PTBP1-216ENST00000590887 PRB2P02812 416 aaPredicted RBP9.18□□□□□ -0.94
PTBP1-216ENST00000590887 NEGR1Q7Z3B1 354 aa9.18□□□□□ -0.94
PTBP1-216ENST00000590887 C20orf203Q8NBC4 194 aa9.18□□□□□ -0.94
PTBP1-216ENST00000590887 C11orf45Q8TAV5 145 aa9.18□□□□□ -0.94
PTBP1-216ENST00000590887 TIMM17AQ99595 171 aa9.18□□□□□ -0.94
PTBP1-216ENST00000590887 C12orf57Q99622 126 aa9.18□□□□□ -0.94
PTBP1-216ENST00000590887 H7C423 109 aa9.17□□□□□ -0.94
PTBP1-216ENST00000590887 NHLRC4P0CG21 123 aaPredicted RBP9.17□□□□□ -0.94
PTBP1-216ENST00000590887 GYPEP15421 78 aa9.17□□□□□ -0.94
PTBP1-216ENST00000590887 MRPL23Q16540 153 aaKnown RBP9.17□□□□□ -0.94
PTBP1-216ENST00000590887 PYY3Q5JQD4 70 aa9.17□□□□□ -0.94
PTBP1-216ENST00000590887 LGALS9CQ6DKI2 356 aa9.17□□□□□ -0.94
PTBP1-216ENST00000590887 PHLDA1Q8WV24 401 aaPredicted RBP9.17□□□□□ -0.94
PTBP1-216ENST00000590887 RETNQ9HD89 108 aa9.17□□□□□ -0.94
PTBP1-216ENST00000590887 TRBV25-1A0A075B6N4 114 aa9.16□□□□□ -0.94
PTBP1-216ENST00000590887 HSBP1L1C9JCN9 74 aa9.16□□□□□ -0.94
PTBP1-216ENST00000590887 H3BNG1 76 aa9.16□□□□□ -0.94
PTBP1-216ENST00000590887 UBE2L6O14933 153 aa9.16□□□□□ -0.94
PTBP1-216ENST00000590887 ATP6V0E2Q8NHE4 81 aa9.16□□□□□ -0.94
PTBP1-216ENST00000590887 B9D2Q9BPU9 175 aa9.16□□□□□ -0.94
PTBP1-216ENST00000590887 CELA1Q9UNI1 258 aa9.16□□□□□ -0.94
PTBP1-216ENST00000590887 PYGO1Q9Y3Y4 419 aa9.16□□□□□ -0.94
PTBP1-216ENST00000590887 TRAV26-1A0A087WT03 109 aa9.15□□□□□ -0.94
PTBP1-216ENST00000590887 TRAV12-1A0A0B4J245 112 aa9.15□□□□□ -0.94
PTBP1-216ENST00000590887 A0A0J9YWU9 116 aa9.15□□□□□ -0.94
PTBP1-216ENST00000590887 H0Y8G0 127 aa9.15□□□□□ -0.94
PTBP1-216ENST00000590887 HTN3P15516 51 aa9.15□□□□□ -0.94
PTBP1-216ENST00000590887 PKIAP61925 76 aa9.15□□□□□ -0.94
PTBP1-216ENST00000590887 C12orf74Q32Q52 190 aa9.15□□□□□ -0.94
PTBP1-216ENST00000590887 DGAT2L7PQ6IED9 249 aa9.15□□□□□ -0.94
PTBP1-216ENST00000590887 SPANXA1Q9NS26 97 aa9.15□□□□□ -0.94
PTBP1-216ENST00000590887 ICOSQ9Y6W8 199 aa9.15□□□□□ -0.94
PTBP1-216ENST00000590887 IGHV3-38A0A0C4DH36 116 aa9.14□□□□□ -0.95
PTBP1-216ENST00000590887 LINC01545Q5VT33 79 aa9.14□□□□□ -0.95
PTBP1-216ENST00000590887 TMEM101Q96IK0 257 aa9.14□□□□□ -0.95
PTBP1-216ENST00000590887 TMEM243Q9BU79 118 aa9.14□□□□□ -0.95
PTBP1-216ENST00000590887 TIMM21Q9BVV7 248 aa9.14□□□□□ -0.95
PTBP1-216ENST00000590887 PMVKQ15126 192 aa9.13□□□□□ -0.95
PTBP1-216ENST00000590887 VAMP8Q9BV40 100 aa9.13□□□□□ -0.95
PTBP1-216ENST00000590887 VCX2Q9H322 139 aa9.13□□□□□ -0.95
PTBP1-216ENST00000590887 A0A087WX48 190 aa9.12□□□□□ -0.95
PTBP1-216ENST00000590887 IGIPA6NJ69 53 aa9.12□□□□□ -0.95
PTBP1-216ENST00000590887 LINC00694P0DN24 101 aa9.12□□□□□ -0.95
PTBP1-216ENST00000590887 DEFA6Q01524 100 aa9.12□□□□□ -0.95
PTBP1-216ENST00000590887 AMMECR1LQ6DCA0 310 aa9.12□□□□□ -0.95
PTBP1-216ENST00000590887 LINC00173Q6ZV60 143 aa9.12□□□□□ -0.95
PTBP1-216ENST00000590887 CHCHD7Q9BUK0 85 aa9.12□□□□□ -0.95
PTBP1-216ENST00000590887 TRAV10A0A0B4J240 114 aa9.11□□□□□ -0.95
PTBP1-216ENST00000590887 ZNF25P17030 456 aaPredicted RBP9.11□□□□□ -0.95
PTBP1-216ENST00000590887 PLNP26678 52 aa9.11□□□□□ -0.95
PTBP1-216ENST00000590887 TEX43Q6ZNM6 134 aa9.11□□□□□ -0.95
PTBP1-216ENST00000590887 C2orf88Q9BSF0 95 aa9.11□□□□□ -0.95
PTBP1-216ENST00000590887 Q9UF83 564 aa9.11□□□□□ -0.95
PTBP1-216ENST00000590887 CHTOPQ9Y3Y2 248 aaKnown RBP9.11□□□□□ -0.95
PTBP1-216ENST00000590887 CSDC2Q9Y534 153 aaKnown RBP9.11□□□□□ -0.95
PTBP1-216ENST00000590887 DNAH9Q9NYC9 4486 aa9.11□□□□□ -0.95
PTBP1-216ENST00000590887 TRAV9-2A0A087WT02 112 aa9.1□□□□□ -0.95
PTBP1-216ENST00000590887 DEFB131BA0A096LNP1 70 aa9.1□□□□□ -0.95
PTBP1-216ENST00000590887 TRBV6-8A0A0A6YYG3 113 aa9.1□□□□□ -0.95
PTBP1-216ENST00000590887 A0A0J9YY99 117 aa9.1□□□□□ -0.95
PTBP1-216ENST00000590887 LOC100131303A0A0U1RQF7 123 aa9.1□□□□□ -0.95
PTBP1-216ENST00000590887 RPL39P62891 51 aaKnown RBP9.1□□□□□ -0.95
PTBP1-216ENST00000590887 BAALCQ8WXS3 180 aa9.1□□□□□ -0.95
PTBP1-216ENST00000590887 F8VRH5 84 aa9.09□□□□□ -0.95
PTBP1-216ENST00000590887 TSTD3H0UI37 97 aa9.09□□□□□ -0.95
PTBP1-216ENST00000590887 DPM2O94777 84 aa9.09□□□□□ -0.95
PTBP1-216ENST00000590887 IGKCP01834 107 aa9.09□□□□□ -0.95
PTBP1-216ENST00000590887 MRPS36P82909 103 aaKnown RBP9.09□□□□□ -0.95
PTBP1-216ENST00000590887 Q6ZTC4 211 aa9.09□□□□□ -0.95
PTBP1-216ENST00000590887 MRPL52Q86TS9 123 aaKnown RBP9.09□□□□□ -0.95
PTBP1-216ENST00000590887 VSIG2Q96IQ7 327 aa9.09□□□□□ -0.95
PTBP1-216ENST00000590887 UBE2D4Q9Y2X8 147 aa9.09□□□□□ -0.95
PTBP1-216ENST00000590887 PRSS29PA6NIE9 313 aa9.08□□□□□ -0.96
PTBP1-216ENST00000590887 TIRAPP58753 221 aa9.08□□□□□ -0.96
PTBP1-216ENST00000590887 NANOS2P60321 138 aaKnown RBP9.08□□□□□ -0.96
PTBP1-216ENST00000590887 SEC11AP67812 179 aa9.08□□□□□ -0.96
PTBP1-216ENST00000590887 Q8N976 141 aa9.08□□□□□ -0.96
PTBP1-216ENST00000590887 OR5A1Q8NGJ0 315 aa9.08□□□□□ -0.96
PTBP1-216ENST00000590887 DEFB104AQ8WTQ1 72 aa9.08□□□□□ -0.96
PTBP1-216ENST00000590887 CHCHD5Q9BSY4 110 aa9.08□□□□□ -0.96
PTBP1-216ENST00000590887 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 193 ms