RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 IGLV5-52A0A0A0MRZ9 124 aa14.73□□□□□ -0.05
MBD3-208ENST00000590830 XGP55808 180 aa14.73□□□□□ -0.05
MBD3-208ENST00000590830 BORCS7Q96B45 105 aa14.73□□□□□ -0.05
MBD3-208ENST00000590830 RNF185Q96GF1 192 aa14.73□□□□□ -0.05
MBD3-208ENST00000590830 TMEM243Q9BU79 118 aa14.72□□□□□ -0.05
MBD3-208ENST00000590830 TMEM191AQ9H0A3 160 aa14.72□□□□□ -0.05
MBD3-208ENST00000590830 PRR34Q9NV39 138 aa14.72□□□□□ -0.05
MBD3-208ENST00000590830 COTL1Q14019 142 aa14.71□□□□□ -0.05
MBD3-208ENST00000590830 LINC00269Q8N2A0 174 aa14.71□□□□□ -0.05
MBD3-208ENST00000590830 RAB4AP20338 218 aa14.7□□□□□ -0.06
MBD3-208ENST00000590830 C20orf203Q8NBC4 194 aa14.7□□□□□ -0.06
MBD3-208ENST00000590830 IGLV4-60A0A075B6I1 120 aa14.69□□□□□ -0.06
MBD3-208ENST00000590830 SMIM27A0A1W2PRY6 76 aa14.69□□□□□ -0.06
MBD3-208ENST00000590830 CRPP02741 224 aa14.69□□□□□ -0.06
MBD3-208ENST00000590830 KRTAP26-1Q6PEX3 210 aa14.69□□□□□ -0.06
MBD3-208ENST00000590830 CLPSL2Q6UWE3 100 aa14.69□□□□□ -0.06
MBD3-208ENST00000590830 AMN1Q8IY45 258 aa14.69□□□□□ -0.06
MBD3-208ENST00000590830 C1orf43Q9BWL3 253 aa14.69□□□□□ -0.06
MBD3-208ENST00000590830 NAT8BQ9UHF3 227 aa14.69□□□□□ -0.06
MBD3-208ENST00000590830 FAT1Q14517 4588 aa14.69□□□□□ -0.06
MBD3-208ENST00000590830 TRBV6-5A0A0K0K1A5 114 aa14.68□□□□□ -0.06
MBD3-208ENST00000590830 AMTP48728 403 aa14.68□□□□□ -0.06
MBD3-208ENST00000590830 RIGQ13278 110 aa14.68□□□□□ -0.06
MBD3-208ENST00000590830 A0A1B0GUV1 79 aa14.67□□□□□ -0.06
MBD3-208ENST00000590830 SDHAF1A6NFY7 115 aa14.67□□□□□ -0.06
MBD3-208ENST00000590830 RPS10P46783 165 aaKnown RBP14.67□□□□□ -0.06
MBD3-208ENST00000590830 MIAQ16674 131 aa14.67□□□□□ -0.06
MBD3-208ENST00000590830 Q8N1X5 172 aa14.67□□□□□ -0.06
MBD3-208ENST00000590830 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.66□□□□□ -0.06
MBD3-208ENST00000590830 RAB14P61106 215 aa14.65□□□□□ -0.06
MBD3-208ENST00000590830 SMKR1H3BMG3 65 aa14.64□□□□□ -0.07
MBD3-208ENST00000590830 IFITM2Q01629 132 aa14.64□□□□□ -0.07
MBD3-208ENST00000590830 REG3AQ06141 175 aa14.64□□□□□ -0.07
MBD3-208ENST00000590830 FAM30AQ9NZY2 134 aa14.64□□□□□ -0.07
MBD3-208ENST00000590830 I3L3M4 83 aa14.63□□□□□ -0.07
MBD3-208ENST00000590830 NCR2O95944 276 aa14.63□□□□□ -0.07
MBD3-208ENST00000590830 POLR2KP53803 58 aaKnown RBP14.63□□□□□ -0.07
MBD3-208ENST00000590830 CLLU1Q5K131 121 aa14.63□□□□□ -0.07
MBD3-208ENST00000590830 MRAP2Q96G30 205 aa14.63□□□□□ -0.07
MBD3-208ENST00000590830 TMEM70Q9BUB7 260 aa14.63□□□□□ -0.07
MBD3-208ENST00000590830 ST20Q9HBF5 79 aa14.63□□□□□ -0.07
MBD3-208ENST00000590830 UBE2L6O14933 153 aa14.62□□□□□ -0.07
MBD3-208ENST00000590830 PMCHP20382 165 aa14.62□□□□□ -0.07
MBD3-208ENST00000590830 HAMPP81172 84 aa14.62□□□□□ -0.07
MBD3-208ENST00000590830 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.61□□□□□ -0.07
MBD3-208ENST00000590830 IGKV2-29A2NJV5 120 aaPredicted RBP14.61□□□□□ -0.07
MBD3-208ENST00000590830 TSHBP01222 138 aa14.61□□□□□ -0.07
MBD3-208ENST00000590830 LINC01620Q4KN68 170 aa14.61□□□□□ -0.07
MBD3-208ENST00000590830 NRACQ8N912 160 aa14.61□□□□□ -0.07
MBD3-208ENST00000590830 IGLV10-54A0A075B6I4 117 aa14.6□□□□□ -0.07
MBD3-208ENST00000590830 APCSP02743 223 aa14.6□□□□□ -0.07
MBD3-208ENST00000590830 CAMPP49913 170 aa14.6□□□□□ -0.07
MBD3-208ENST00000590830 MRPL51Q4U2R6 128 aaKnown RBP14.6□□□□□ -0.07
MBD3-208ENST00000590830 FAM104BQ5XKR9 115 aa14.6□□□□□ -0.07
MBD3-208ENST00000590830 USP17L23D6RBM5 183 aa14.59□□□□□ -0.07
MBD3-208ENST00000590830 HLA-DQA1P01909 254 aa14.59□□□□□ -0.07
MBD3-208ENST00000590830 ESDP10768 282 aa14.59□□□□□ -0.07
MBD3-208ENST00000590830 TMEM242Q9NWH2 141 aa14.59□□□□□ -0.07
MBD3-208ENST00000590830 MRPL54Q6P161 138 aaKnown RBP14.58□□□□□ -0.08
MBD3-208ENST00000590830 TRBV27A0A0K0K1C4 114 aa14.57□□□□□ -0.08
MBD3-208ENST00000590830 A0A1B0GXF2 115 aa14.57□□□□□ -0.08
MBD3-208ENST00000590830 H7C423 109 aa14.57□□□□□ -0.08
MBD3-208ENST00000590830 TRAV8-4A0A0B4J246 113 aa14.56□□□□□ -0.08
MBD3-208ENST00000590830 A0A1B0GW15 77 aa14.56□□□□□ -0.08
MBD3-208ENST00000590830 FGF6P10767 208 aa14.56□□□□□ -0.08
MBD3-208ENST00000590830 PRSS1P07477 247 aa14.55□□□□□ -0.08
MBD3-208ENST00000590830 AMMECR1LQ6DCA0 310 aa14.55□□□□□ -0.08
MBD3-208ENST00000590830 Q6ZSA8 131 aa14.55□□□□□ -0.08
MBD3-208ENST00000590830 VCYO14598 125 aa14.54□□□□□ -0.08
MBD3-208ENST00000590830 SMR3BP02814 79 aaPredicted RBP14.54□□□□□ -0.08
MBD3-208ENST00000590830 C14orf177Q52M58 125 aa14.54□□□□□ -0.08
MBD3-208ENST00000590830 RNASEKQ6P5S7 137 aaKnown RBP14.54□□□□□ -0.08
MBD3-208ENST00000590830 SUMO2P61956 95 aaKnown RBP14.53□□□□□ -0.08
MBD3-208ENST00000590830 HBBP68871 147 aa14.53□□□□□ -0.08
MBD3-208ENST00000590830 PNRC1Q12796 327 aaPredicted RBP14.53□□□□□ -0.08
MBD3-208ENST00000590830 IGKV3OR2-268A0A0C4DH90 116 aa14.52□□□□□ -0.09
MBD3-208ENST00000590830 PPP1R2P9O14990 202 aa14.52□□□□□ -0.09
MBD3-208ENST00000590830 LINC00862A6NCI5 91 aa14.51□□□□□ -0.09
MBD3-208ENST00000590830 PPP1R17O96001 155 aa14.51□□□□□ -0.09
MBD3-208ENST00000590830 VPS13BQ7Z7G8 4022 aa14.51□□□□□ -0.09
MBD3-208ENST00000590830 TRBV24-1A0A075B6N3 115 aa14.5□□□□□ -0.09
MBD3-208ENST00000590830 EPM2AB3EWF7 344 aa14.5□□□□□ -0.09
MBD3-208ENST00000590830 CKS2P33552 79 aa14.5□□□□□ -0.09
MBD3-208ENST00000590830 GAGE12HA6NDE8 117 aa14.49□□□□□ -0.09
MBD3-208ENST00000590830 MT-ND4LP03901 98 aa14.49□□□□□ -0.09
MBD3-208ENST00000590830 S100A8P05109 93 aa14.49□□□□□ -0.09
MBD3-208ENST00000590830 ZNF25P17030 456 aaPredicted RBP14.49□□□□□ -0.09
MBD3-208ENST00000590830 ADCYAP1P18509 176 aa14.49□□□□□ -0.09
MBD3-208ENST00000590830 F8W036 122 aa14.48□□□□□ -0.09
MBD3-208ENST00000590830 TNFRSF6BO95407 300 aa14.48□□□□□ -0.09
MBD3-208ENST00000590830 ATP5L2Q7Z4Y8 100 aa14.48□□□□□ -0.09
MBD3-208ENST00000590830 MRPL52Q86TS9 123 aaKnown RBP14.48□□□□□ -0.09
MBD3-208ENST00000590830 ANAPC16Q96DE5 110 aa14.48□□□□□ -0.09
MBD3-208ENST00000590830 C20orf78Q9BR46 151 aa14.48□□□□□ -0.09
MBD3-208ENST00000590830 C7orf77A4D0Y5 90 aa14.47□□□□□ -0.09
MBD3-208ENST00000590830 D6R8Y8 96 aa14.47□□□□□ -0.09
MBD3-208ENST00000590830 DGAT2L7PQ6IED9 249 aa14.47□□□□□ -0.09
MBD3-208ENST00000590830 OR5A1Q8NGJ0 315 aa14.47□□□□□ -0.09
MBD3-208ENST00000590830 CHCHD10Q8WYQ3 142 aaPredicted RBP14.47□□□□□ -0.09
MBD3-208ENST00000590830 CDC42SE2Q9NRR3 84 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms