RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-229ENST00000590704 ST20Q9HBF5 79 aa14.11□□□□□ -0.15
CIRBP-229ENST00000590704 TRBV25-1A0A075B6N4 114 aa14.1□□□□□ -0.15
CIRBP-229ENST00000590704 NPYP01303 97 aa14.1□□□□□ -0.15
CIRBP-229ENST00000590704 CKS2P33552 79 aa14.1□□□□□ -0.15
CIRBP-229ENST00000590704 YPEL4Q96NS1 127 aa14.1□□□□□ -0.15
CIRBP-229ENST00000590704 TNFRSF6BO95407 300 aa14.09□□□□□ -0.15
CIRBP-229ENST00000590704 ESDP10768 282 aa14.09□□□□□ -0.15
CIRBP-229ENST00000590704 SUMO2P61956 95 aaKnown RBP14.09□□□□□ -0.15
CIRBP-229ENST00000590704 COTL1Q14019 142 aa14.09□□□□□ -0.15
CIRBP-229ENST00000590704 LINC00336Q6ZUF6 198 aa14.09□□□□□ -0.15
CIRBP-229ENST00000590704 C10orf126Q8N4M7 172 aa14.09□□□□□ -0.15
CIRBP-229ENST00000590704 Q8N976 141 aa14.09□□□□□ -0.15
CIRBP-229ENST00000590704 DYNC1H1Q14204 4646 aaKnown RBP14.09□□□□□ -0.15
CIRBP-229ENST00000590704 PRSS29PA6NIE9 313 aa14.08□□□□□ -0.16
CIRBP-229ENST00000590704 I3L3M4 83 aa14.08□□□□□ -0.16
CIRBP-229ENST00000590704 SNAPINO95295 136 aa14.08□□□□□ -0.16
CIRBP-229ENST00000590704 GAGE6Q13070 117 aa14.08□□□□□ -0.16
CIRBP-229ENST00000590704 CHCHD5Q9BSY4 110 aa14.08□□□□□ -0.16
CIRBP-229ENST00000590704 RBX1P62877 108 aa14.07□□□□□ -0.16
CIRBP-229ENST00000590704 RPL32P62910 135 aaKnown RBP14.07□□□□□ -0.16
CIRBP-229ENST00000590704 KCNIP4Q6PIL6 250 aa14.07□□□□□ -0.16
CIRBP-229ENST00000590704 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.07□□□□□ -0.16
CIRBP-229ENST00000590704 KLK12Q9UKR0 248 aa14.07□□□□□ -0.16
CIRBP-229ENST00000590704 IGLV4-60A0A075B6I1 120 aa14.06□□□□□ -0.16
CIRBP-229ENST00000590704 PMCHP20382 165 aa14.06□□□□□ -0.16
CIRBP-229ENST00000590704 ELOBQ15370 118 aa14.06□□□□□ -0.16
CIRBP-229ENST00000590704 ENHOQ6UWT2 76 aa14.06□□□□□ -0.16
CIRBP-229ENST00000590704 C20orf203Q8NBC4 194 aa14.06□□□□□ -0.16
CIRBP-229ENST00000590704 C20orf78Q9BR46 151 aa14.06□□□□□ -0.16
CIRBP-229ENST00000590704 TMEM243Q9BU79 118 aa14.06□□□□□ -0.16
CIRBP-229ENST00000590704 PRSS47A8MTI9 375 aa14.06□□□□□ -0.16
CIRBP-229ENST00000590704 TMEM262E9PQX1 116 aa14.06□□□□□ -0.16
CIRBP-229ENST00000590704 PPBPP02775 128 aa14.06□□□□□ -0.16
CIRBP-229ENST00000590704 LAGE3Q14657 143 aa14.06□□□□□ -0.16
CIRBP-229ENST00000590704 TGIF2-C20orf24A0A0A6YYL0 155 aa14.05□□□□□ -0.16
CIRBP-229ENST00000590704 A0A1B0GUV1 79 aa14.05□□□□□ -0.16
CIRBP-229ENST00000590704 VCYO14598 125 aa14.05□□□□□ -0.16
CIRBP-229ENST00000590704 PHOX2AO14813 284 aa14.05□□□□□ -0.16
CIRBP-229ENST00000590704 PPP1R17O96001 155 aa14.05□□□□□ -0.16
CIRBP-229ENST00000590704 AMTP48728 403 aa14.05□□□□□ -0.16
CIRBP-229ENST00000590704 NDUFA5Q16718 116 aa14.05□□□□□ -0.16
CIRBP-229ENST00000590704 ORMDL3Q8N138 153 aa14.05□□□□□ -0.16
CIRBP-229ENST00000590704 MAPKAPK5-AS1Q8N8E1 139 aa14.05□□□□□ -0.16
CIRBP-229ENST00000590704 DNAH5Q8TE73 4624 aa14.04□□□□□ -0.16
CIRBP-229ENST00000590704 A0A087WX48 190 aa14.04□□□□□ -0.16
CIRBP-229ENST00000590704 PRELID3AQ96N28 172 aa14.04□□□□□ -0.16
CIRBP-229ENST00000590704 GNB1LQ9BYB4 327 aa14.04□□□□□ -0.16
CIRBP-229ENST00000590704 PRR34Q9NV39 138 aa14.04□□□□□ -0.16
CIRBP-229ENST00000590704 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.03□□□□□ -0.16
CIRBP-229ENST00000590704 IGKV2-29A2NJV5 120 aaPredicted RBP14.03□□□□□ -0.16
CIRBP-229ENST00000590704 S100PP25815 95 aa14.03□□□□□ -0.16
CIRBP-229ENST00000590704 KIAA1644Q3SXP7 199 aa14.02□□□□□ -0.16
CIRBP-229ENST00000590704 SMIM2Q9BVW6 85 aa14.02□□□□□ -0.16
CIRBP-229ENST00000590704 Q9HAA7 133 aa14.02□□□□□ -0.16
CIRBP-229ENST00000590704 KRTAP26-1Q6PEX3 210 aa14.01□□□□□ -0.17
CIRBP-229ENST00000590704 NFE4Q86UQ8 179 aa14.01□□□□□ -0.17
CIRBP-229ENST00000590704 LRCOL1A6NCL2 159 aa14□□□□□ -0.17
CIRBP-229ENST00000590704 APCSP02743 223 aa14□□□□□ -0.17
CIRBP-229ENST00000590704 ANGP03950 147 aaKnown RBP13.99□□□□□ -0.17
CIRBP-229ENST00000590704 FAM104AQ969W3 186 aa13.99□□□□□ -0.17
CIRBP-229ENST00000590704 UBE2WQ96B02 151 aa13.99□□□□□ -0.17
CIRBP-229ENST00000590704 TRAV8-3A0A0A6YYJ7 113 aa13.98□□□□□ -0.17
CIRBP-229ENST00000590704 H7C423 109 aa13.98□□□□□ -0.17
CIRBP-229ENST00000590704 HLA-DQA1P01909 254 aa13.98□□□□□ -0.17
CIRBP-229ENST00000590704 PKIAP61925 76 aa13.98□□□□□ -0.17
CIRBP-229ENST00000590704 LINC00269Q8N2A0 174 aa13.98□□□□□ -0.17
CIRBP-229ENST00000590704 LAMTOR2Q9Y2Q5 125 aa13.98□□□□□ -0.17
CIRBP-229ENST00000590704 LRP1BQ9NZR2 4599 aa13.98□□□□□ -0.17
CIRBP-229ENST00000590704 TCAPO15273 167 aa13.97□□□□□ -0.17
CIRBP-229ENST00000590704 FGF6P10767 208 aa13.97□□□□□ -0.17
CIRBP-229ENST00000590704 WFDC2Q14508 124 aa13.97□□□□□ -0.17
CIRBP-229ENST00000590704 CBLN2Q8IUK8 224 aa13.97□□□□□ -0.17
CIRBP-229ENST00000590704 A0A087WTM6 91 aa13.95□□□□□ -0.18
CIRBP-229ENST00000590704 MRPL52Q86TS9 123 aaKnown RBP13.95□□□□□ -0.18
CIRBP-229ENST00000590704 KIR2DL4Q99706 377 aa13.95□□□□□ -0.18
CIRBP-229ENST00000590704 ALKBH7Q9BT30 221 aaPredicted RBP13.95□□□□□ -0.18
CIRBP-229ENST00000590704 LOC389332A0A1B0GUA5 103 aa13.94□□□□□ -0.18
CIRBP-229ENST00000590704 KRTAP10-2P60368 255 aa13.94□□□□□ -0.18
CIRBP-229ENST00000590704 COX19Q49B96 90 aa13.94□□□□□ -0.18
CIRBP-229ENST00000590704 CLPSL2Q6UWE3 100 aa13.94□□□□□ -0.18
CIRBP-229ENST00000590704 MRPL18Q9H0U6 180 aaKnown RBP13.94□□□□□ -0.18
CIRBP-229ENST00000590704 UBE2L6O14933 153 aa13.93□□□□□ -0.18
CIRBP-229ENST00000590704 UBE2D4Q9Y2X8 147 aa13.93□□□□□ -0.18
CIRBP-229ENST00000590704 RPL39P62891 51 aaKnown RBP13.93□□□□□ -0.18
CIRBP-229ENST00000590704 REG3AQ06141 175 aa13.93□□□□□ -0.18
CIRBP-229ENST00000590704 Q0VG73 95 aa13.93□□□□□ -0.18
CIRBP-229ENST00000590704 MT-ND6P03923 174 aa13.92□□□□□ -0.18
CIRBP-229ENST00000590704 FCER1GP30273 86 aa13.92□□□□□ -0.18
CIRBP-229ENST00000590704 Q8N8P6 123 aa13.92□□□□□ -0.18
CIRBP-229ENST00000590704 MAP1LC3AQ9H492 121 aa13.92□□□□□ -0.18
CIRBP-229ENST00000590704 CDC42SE2Q9NRR3 84 aa13.92□□□□□ -0.18
CIRBP-229ENST00000590704 MIAQ16674 131 aa13.91□□□□□ -0.18
CIRBP-229ENST00000590704 IGKV2D-24A0A075B6R9 120 aa13.9□□□□□ -0.18
CIRBP-229ENST00000590704 ZNF25P17030 456 aaPredicted RBP13.9□□□□□ -0.18
CIRBP-229ENST00000590704 FUSP35637 526 aaKnown RBP eCLIP13.9□□□□□ -0.18
CIRBP-229ENST00000590704 IFI27P40305 119 aaPredicted RBP13.9□□□□□ -0.18
CIRBP-229ENST00000590704 FABP9Q0Z7S8 132 aa13.9□□□□□ -0.18
CIRBP-229ENST00000590704 SMCO4Q9NRQ5 59 aa13.9□□□□□ -0.18
CIRBP-229ENST00000590704 CSDC2Q9Y534 153 aaKnown RBP13.9□□□□□ -0.18
CIRBP-229ENST00000590704 RNASEKQ6P5S7 137 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms