RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 CIRBPQ14011 172 aaKnown RBP13.89□□□□□ -0.19
DDX39A-215ENST00000590696 AP5S1Q9NUS5 200 aa13.89□□□□□ -0.19
DDX39A-215ENST00000590696 MED9Q9NWA0 146 aa13.89□□□□□ -0.19
DDX39A-215ENST00000590696 TRBV20OR9-2A0A075B6H5 130 aa13.88□□□□□ -0.19
DDX39A-215ENST00000590696 IGHV3-64A0A075B6Q5 118 aa13.88□□□□□ -0.19
DDX39A-215ENST00000590696 SLPIP03973 132 aa13.88□□□□□ -0.19
DDX39A-215ENST00000590696 DPH3Q96FX2 82 aa13.88□□□□□ -0.19
DDX39A-215ENST00000590696 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.87□□□□□ -0.19
DDX39A-215ENST00000590696 AMTP48728 403 aa13.87□□□□□ -0.19
DDX39A-215ENST00000590696 COTL1Q14019 142 aa13.87□□□□□ -0.19
DDX39A-215ENST00000590696 EIF5AL1Q6IS14 154 aaKnown RBP13.87□□□□□ -0.19
DDX39A-215ENST00000590696 C9orf62Q8N4C0 152 aa13.87□□□□□ -0.19
DDX39A-215ENST00000590696 BIN3Q9NQY0 253 aa13.87□□□□□ -0.19
DDX39A-215ENST00000590696 UBR4Q5T4S7 5183 aa13.87□□□□□ -0.19
DDX39A-215ENST00000590696 SULT1A2P50226 295 aa13.86□□□□□ -0.19
DDX39A-215ENST00000590696 WDR73Q6P4I2 378 aa13.86□□□□□ -0.19
DDX39A-215ENST00000590696 NUDT10Q8NFP7 164 aa13.86□□□□□ -0.19
DDX39A-215ENST00000590696 NUDT11Q96G61 164 aa13.86□□□□□ -0.19
DDX39A-215ENST00000590696 TWIST1Q15672 202 aa13.85□□□□□ -0.19
DDX39A-215ENST00000590696 CHTF8P0CG12 524 aa13.84□□□□□ -0.19
DDX39A-215ENST00000590696 CTRLP40313 264 aa13.84□□□□□ -0.19
DDX39A-215ENST00000590696 A0A087WYN8 130 aa13.83□□□□□ -0.2
DDX39A-215ENST00000590696 BCL2P10415 239 aa13.83□□□□□ -0.2
DDX39A-215ENST00000590696 Q6ZRU5 148 aa13.83□□□□□ -0.2
DDX39A-215ENST00000590696 RNF185Q96GF1 192 aa13.83□□□□□ -0.2
DDX39A-215ENST00000590696 IGKV3OR2-268A0A0C4DH90 116 aa13.82□□□□□ -0.2
DDX39A-215ENST00000590696 GAGE12HA6NDE8 117 aa13.82□□□□□ -0.2
DDX39A-215ENST00000590696 C15orf56Q8N910 161 aa13.82□□□□□ -0.2
DDX39A-215ENST00000590696 GATD1Q8NB37 220 aa13.82□□□□□ -0.2
DDX39A-215ENST00000590696 SPACA4Q8TDM5 124 aa13.82□□□□□ -0.2
DDX39A-215ENST00000590696 TRAV26-2A0A0B4J265 109 aa13.81□□□□□ -0.2
DDX39A-215ENST00000590696 MT1HL1P0DM35 61 aa13.81□□□□□ -0.2
DDX39A-215ENST00000590696 CNFNQ9BYD5 112 aa13.81□□□□□ -0.2
DDX39A-215ENST00000590696 CFAP161Q6P656 301 aa13.8□□□□□ -0.2
DDX39A-215ENST00000590696 RNASE7Q9H1E1 156 aaKnown RBP13.8□□□□□ -0.2
DDX39A-215ENST00000590696 RPP21Q9H633 154 aaKnown RBP13.8□□□□□ -0.2
DDX39A-215ENST00000590696 K7EN84 100 aa13.78□□□□□ -0.2
DDX39A-215ENST00000590696 AMMECR1LQ6DCA0 310 aa13.78□□□□□ -0.2
DDX39A-215ENST00000590696 Q6ZNX1 250 aa13.78□□□□□ -0.2
DDX39A-215ENST00000590696 OCC1Q8TAD7 63 aa13.78□□□□□ -0.2
DDX39A-215ENST00000590696 RPL39LQ96EH5 51 aaKnown RBP13.78□□□□□ -0.2
DDX39A-215ENST00000590696 PLAC8Q9NZF1 115 aa13.78□□□□□ -0.2
DDX39A-215ENST00000590696 RPS10P46783 165 aaKnown RBP13.77□□□□□ -0.21
DDX39A-215ENST00000590696 COX6A2Q02221 97 aa13.77□□□□□ -0.21
DDX39A-215ENST00000590696 HIGD2BQ4VC39 106 aa13.77□□□□□ -0.21
DDX39A-215ENST00000590696 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.76□□□□□ -0.21
DDX39A-215ENST00000590696 IGKV2-29A2NJV5 120 aaPredicted RBP13.76□□□□□ -0.21
DDX39A-215ENST00000590696 TAGLN2P37802 199 aaKnown RBP13.76□□□□□ -0.21
DDX39A-215ENST00000590696 RNASEKQ6P5S7 137 aaKnown RBP13.76□□□□□ -0.21
DDX39A-215ENST00000590696 CHCHD10Q8WYQ3 142 aaPredicted RBP13.76□□□□□ -0.21
DDX39A-215ENST00000590696 PHOX2AO14813 284 aa13.75□□□□□ -0.21
DDX39A-215ENST00000590696 NCR2O95944 276 aa13.75□□□□□ -0.21
DDX39A-215ENST00000590696 FOXA3P55318 350 aaPredicted RBP13.75□□□□□ -0.21
DDX39A-215ENST00000590696 SMIM15Q7Z3B0 74 aa13.75□□□□□ -0.21
DDX39A-215ENST00000590696 SLC51BQ86UW2 128 aa13.75□□□□□ -0.21
DDX39A-215ENST00000590696 GTSF1Q8WW33 167 aa13.75□□□□□ -0.21
DDX39A-215ENST00000590696 H7C423 109 aa13.74□□□□□ -0.21
DDX39A-215ENST00000590696 NDUFS6O75380 124 aaKnown RBP13.74□□□□□ -0.21
DDX39A-215ENST00000590696 APCSP02743 223 aa13.74□□□□□ -0.21
DDX39A-215ENST00000590696 PRSS3P2Q8NHM4 247 aa13.74□□□□□ -0.21
DDX39A-215ENST00000590696 FGF6P10767 208 aa13.73□□□□□ -0.21
DDX39A-215ENST00000590696 MAJINQ3KP22 176 aa13.73□□□□□ -0.21
DDX39A-215ENST00000590696 C7orf33Q8WU49 177 aa13.73□□□□□ -0.21
DDX39A-215ENST00000590696 IGKV2-24A0A0C4DH68 120 aa13.72□□□□□ -0.21
DDX39A-215ENST00000590696 SDHAF1A6NFY7 115 aa13.72□□□□□ -0.21
DDX39A-215ENST00000590696 TEX261Q6UWH6 196 aa13.72□□□□□ -0.21
DDX39A-215ENST00000590696 TCTE3Q8IZS6 198 aa13.71□□□□□ -0.21
DDX39A-215ENST00000590696 GVQW2A0A096LPI5 108 aaPredicted RBP13.7□□□□□ -0.22
DDX39A-215ENST00000590696 GATCO43716 136 aaKnown RBP13.7□□□□□ -0.22
DDX39A-215ENST00000590696 PMCHP20382 165 aa13.7□□□□□ -0.22
DDX39A-215ENST00000590696 FOXI1Q12951 378 aa13.7□□□□□ -0.22
DDX39A-215ENST00000590696 OR5A1Q8NGJ0 315 aa13.69□□□□□ -0.22
DDX39A-215ENST00000590696 FAM231BA6NCW3 169 aa13.68□□□□□ -0.22
DDX39A-215ENST00000590696 I3L3M4 83 aa13.68□□□□□ -0.22
DDX39A-215ENST00000590696 ZNF25P17030 456 aaPredicted RBP13.68□□□□□ -0.22
DDX39A-215ENST00000590696 STPG4Q8N801 248 aa13.68□□□□□ -0.22
DDX39A-215ENST00000590696 A8MWL6 223 aa13.67□□□□□ -0.22
DDX39A-215ENST00000590696 FAM231DQ6ZW35 169 aa13.67□□□□□ -0.22
DDX39A-215ENST00000590696 LYPD6BQ8NI32 183 aa13.67□□□□□ -0.22
DDX39A-215ENST00000590696 TMEM101Q96IK0 257 aa13.67□□□□□ -0.22
DDX39A-215ENST00000590696 BTF3L4Q96K17 158 aa13.67□□□□□ -0.22
DDX39A-215ENST00000590696 A0A096LNI7 61 aa13.66□□□□□ -0.22
DDX39A-215ENST00000590696 TRBV6-5A0A0K0K1A5 114 aa13.66□□□□□ -0.22
DDX39A-215ENST00000590696 TMEM250H0YL14 139 aa13.66□□□□□ -0.22
DDX39A-215ENST00000590696 XCL1P47992 114 aa13.66□□□□□ -0.22
DDX39A-215ENST00000590696 LINC00959A0A1B0GUT2 108 aa13.65□□□□□ -0.22
DDX39A-215ENST00000590696 CCL25O15444 150 aa13.65□□□□□ -0.22
DDX39A-215ENST00000590696 GAS8-AS1O95177 125 aa13.65□□□□□ -0.22
DDX39A-215ENST00000590696 ESDP10768 282 aa13.64□□□□□ -0.23
DDX39A-215ENST00000590696 PRR3P79522 188 aaKnown RBP13.64□□□□□ -0.23
DDX39A-215ENST00000590696 ST20Q9HBF5 79 aa13.64□□□□□ -0.23
DDX39A-215ENST00000590696 TNXBP22105 4242 aa13.63□□□□□ -0.23
DDX39A-215ENST00000590696 TSHBP01222 138 aa13.63□□□□□ -0.23
DDX39A-215ENST00000590696 CEBPGP53567 150 aa13.63□□□□□ -0.23
DDX39A-215ENST00000590696 LINC00526Q96FQ7 95 aa13.63□□□□□ -0.23
DDX39A-215ENST00000590696 TMEM242Q9NWH2 141 aa13.63□□□□□ -0.23
DDX39A-215ENST00000590696 IGHV1-58A0A0C4DH39 117 aa13.62□□□□□ -0.23
DDX39A-215ENST00000590696 BLOC1S1P78537 153 aa13.62□□□□□ -0.23
DDX39A-215ENST00000590696 CT83Q5H943 113 aa13.62□□□□□ -0.23
DDX39A-215ENST00000590696 BORCS7Q96B45 105 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms