RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 SMIM27A0A1W2PRY6 76 aa11.98□□□□□ -0.49
DDX39A-212ENST00000590260 RAB4AP20338 218 aa11.98□□□□□ -0.49
DDX39A-212ENST00000590260 RPS10P46783 165 aaKnown RBP11.98□□□□□ -0.49
DDX39A-212ENST00000590260 CLPSL2Q6UWE3 100 aa11.98□□□□□ -0.49
DDX39A-212ENST00000590260 NTN5Q8WTR8 489 aaPredicted RBP11.98□□□□□ -0.49
DDX39A-212ENST00000590260 IGLV5-52A0A0A0MRZ9 124 aa11.97□□□□□ -0.49
DDX39A-212ENST00000590260 TRBV6-5A0A0K0K1A5 114 aa11.97□□□□□ -0.49
DDX39A-212ENST00000590260 GCSHP23434 173 aa11.97□□□□□ -0.49
DDX39A-212ENST00000590260 KCNIP4Q6PIL6 250 aa11.97□□□□□ -0.49
DDX39A-212ENST00000590260 SMIM15Q7Z3B0 74 aa11.97□□□□□ -0.49
DDX39A-212ENST00000590260 AMN1Q8IY45 258 aa11.97□□□□□ -0.49
DDX39A-212ENST00000590260 LINC00269Q8N2A0 174 aa11.97□□□□□ -0.49
DDX39A-212ENST00000590260 TMEM243Q9BU79 118 aa11.97□□□□□ -0.49
DDX39A-212ENST00000590260 SDHAF1A6NFY7 115 aa11.96□□□□□ -0.49
DDX39A-212ENST00000590260 Q0VG73 95 aa11.96□□□□□ -0.49
DDX39A-212ENST00000590260 RMI2Q96E14 147 aa11.96□□□□□ -0.49
DDX39A-212ENST00000590260 COX11Q9Y6N1 276 aa11.96□□□□□ -0.49
DDX39A-212ENST00000590260 FAT1Q14517 4588 aa11.95□□□□□ -0.5
DDX39A-212ENST00000590260 SMKR1H3BMG3 65 aa11.95□□□□□ -0.5
DDX39A-212ENST00000590260 PKIAP61925 76 aa11.95□□□□□ -0.5
DDX39A-212ENST00000590260 COTL1Q14019 142 aa11.95□□□□□ -0.5
DDX39A-212ENST00000590260 BORCS7Q96B45 105 aa11.95□□□□□ -0.5
DDX39A-212ENST00000590260 NAT8BQ9UHF3 227 aa11.95□□□□□ -0.5
DDX39A-212ENST00000590260 A0A1B0GUV1 79 aa11.94□□□□□ -0.5
DDX39A-212ENST00000590260 AMTP48728 403 aa11.94□□□□□ -0.5
DDX39A-212ENST00000590260 CLLU1Q5K131 121 aa11.94□□□□□ -0.5
DDX39A-212ENST00000590260 Q8N1X5 172 aa11.94□□□□□ -0.5
DDX39A-212ENST00000590260 FAM30AQ9NZY2 134 aa11.94□□□□□ -0.5
DDX39A-212ENST00000590260 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.93□□□□□ -0.5
DDX39A-212ENST00000590260 NCR2O95944 276 aa11.93□□□□□ -0.5
DDX39A-212ENST00000590260 CRPP02741 224 aa11.93□□□□□ -0.5
DDX39A-212ENST00000590260 POLR2KP53803 58 aaKnown RBP11.93□□□□□ -0.5
DDX39A-212ENST00000590260 HAMPP81172 84 aa11.93□□□□□ -0.5
DDX39A-212ENST00000590260 RIGQ13278 110 aa11.93□□□□□ -0.5
DDX39A-212ENST00000590260 MIAQ16674 131 aa11.93□□□□□ -0.5
DDX39A-212ENST00000590260 TMEM70Q9BUB7 260 aa11.93□□□□□ -0.5
DDX39A-212ENST00000590260 C1orf43Q9BWL3 253 aa11.93□□□□□ -0.5
DDX39A-212ENST00000590260 TSHBP01222 138 aa11.92□□□□□ -0.5
DDX39A-212ENST00000590260 REG3AQ06141 175 aa11.92□□□□□ -0.5
DDX39A-212ENST00000590260 LINC01620Q4KN68 170 aa11.92□□□□□ -0.5
DDX39A-212ENST00000590260 NRACQ8N912 160 aa11.92□□□□□ -0.5
DDX39A-212ENST00000590260 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.91□□□□□ -0.5
DDX39A-212ENST00000590260 A0A1B0GXF2 115 aa11.91□□□□□ -0.5
DDX39A-212ENST00000590260 IGKV2-29A2NJV5 120 aaPredicted RBP11.91□□□□□ -0.5
DDX39A-212ENST00000590260 MRAP2Q96G30 205 aa11.91□□□□□ -0.5
DDX39A-212ENST00000590260 IGLV10-54A0A075B6I4 117 aa11.9□□□□□ -0.5
DDX39A-212ENST00000590260 ESDP10768 282 aa11.9□□□□□ -0.5
DDX39A-212ENST00000590260 MRPL51Q4U2R6 128 aaKnown RBP11.9□□□□□ -0.5
DDX39A-212ENST00000590260 FAM104BQ5XKR9 115 aa11.9□□□□□ -0.5
DDX39A-212ENST00000590260 TMEM242Q9NWH2 141 aa11.9□□□□□ -0.5
DDX39A-212ENST00000590260 I3L3M4 83 aa11.89□□□□□ -0.51
DDX39A-212ENST00000590260 CAMPP49913 170 aa11.89□□□□□ -0.51
DDX39A-212ENST00000590260 RAB14P61106 215 aa11.89□□□□□ -0.51
DDX39A-212ENST00000590260 ST20Q9HBF5 79 aa11.89□□□□□ -0.51
DDX39A-212ENST00000590260 TRBV27A0A0K0K1C4 114 aa11.88□□□□□ -0.51
DDX39A-212ENST00000590260 USP17L23D6RBM5 183 aa11.88□□□□□ -0.51
DDX39A-212ENST00000590260 HLA-DQA1P01909 254 aa11.88□□□□□ -0.51
DDX39A-212ENST00000590260 MRPL54Q6P161 138 aaKnown RBP11.88□□□□□ -0.51
DDX39A-212ENST00000590260 VPS13BQ7Z7G8 4022 aa11.87□□□□□ -0.51
DDX39A-212ENST00000590260 UBE2L6O14933 153 aa11.87□□□□□ -0.51
DDX39A-212ENST00000590260 APCSP02743 223 aa11.87□□□□□ -0.51
DDX39A-212ENST00000590260 ADCYAP1P18509 176 aa11.87□□□□□ -0.51
DDX39A-212ENST00000590260 PMCHP20382 165 aa11.87□□□□□ -0.51
DDX39A-212ENST00000590260 Q6ZSA8 131 aa11.87□□□□□ -0.51
DDX39A-212ENST00000590260 PRSS1P07477 247 aa11.86□□□□□ -0.51
DDX39A-212ENST00000590260 FGF6P10767 208 aa11.86□□□□□ -0.51
DDX39A-212ENST00000590260 H7C423 109 aa11.84□□□□□ -0.51
DDX39A-212ENST00000590260 HBBP68871 147 aa11.84□□□□□ -0.51
DDX39A-212ENST00000590260 TRAV8-4A0A0B4J246 113 aa11.83□□□□□ -0.52
DDX39A-212ENST00000590260 A0A1B0GW15 77 aa11.83□□□□□ -0.52
DDX39A-212ENST00000590260 SMR3BP02814 79 aaPredicted RBP11.83□□□□□ -0.52
DDX39A-212ENST00000590260 SUMO2P61956 95 aaKnown RBP11.83□□□□□ -0.52
DDX39A-212ENST00000590260 PNRC1Q12796 327 aaPredicted RBP11.83□□□□□ -0.52
DDX39A-212ENST00000590260 TRBV24-1A0A075B6N3 115 aa11.82□□□□□ -0.52
DDX39A-212ENST00000590260 RNASEKQ6P5S7 137 aaKnown RBP11.82□□□□□ -0.52
DDX39A-212ENST00000590260 PPP1R2P9O14990 202 aa11.81□□□□□ -0.52
DDX39A-212ENST00000590260 IGKV3OR2-268A0A0C4DH90 116 aa11.8□□□□□ -0.52
DDX39A-212ENST00000590260 LINC00862A6NCI5 91 aa11.8□□□□□ -0.52
DDX39A-212ENST00000590260 D6R8Y8 96 aa11.8□□□□□ -0.52
DDX39A-212ENST00000590260 VCYO14598 125 aa11.8□□□□□ -0.52
DDX39A-212ENST00000590260 NPYP01303 97 aa11.8□□□□□ -0.52
DDX39A-212ENST00000590260 SLPIP03973 132 aa11.8□□□□□ -0.52
DDX39A-212ENST00000590260 AMMECR1LQ6DCA0 310 aa11.8□□□□□ -0.52
DDX39A-212ENST00000590260 MRPL52Q86TS9 123 aaKnown RBP11.8□□□□□ -0.52
DDX39A-212ENST00000590260 ANAPC16Q96DE5 110 aa11.8□□□□□ -0.52
DDX39A-212ENST00000590260 TMEM218A2RU14 115 aa11.79□□□□□ -0.52
DDX39A-212ENST00000590260 GAGE12HA6NDE8 117 aa11.79□□□□□ -0.52
DDX39A-212ENST00000590260 TNFRSF6BO95407 300 aa11.79□□□□□ -0.52
DDX39A-212ENST00000590260 ZNF25P17030 456 aaPredicted RBP11.79□□□□□ -0.52
DDX39A-212ENST00000590260 CKS2P33552 79 aa11.79□□□□□ -0.52
DDX39A-212ENST00000590260 C14orf177Q52M58 125 aa11.79□□□□□ -0.52
DDX39A-212ENST00000590260 ATP5L2Q7Z4Y8 100 aa11.79□□□□□ -0.52
DDX39A-212ENST00000590260 C7orf77A4D0Y5 90 aa11.78□□□□□ -0.52
DDX39A-212ENST00000590260 PPP1R17O96001 155 aa11.78□□□□□ -0.52
DDX39A-212ENST00000590260 RPL32P62910 135 aaKnown RBP11.78□□□□□ -0.52
DDX39A-212ENST00000590260 Q5VSD8 79 aa11.78□□□□□ -0.52
DDX39A-212ENST00000590260 UQCC3Q6UW78 93 aa11.78□□□□□ -0.52
DDX39A-212ENST00000590260 C15orf56Q8N910 161 aa11.78□□□□□ -0.52
DDX39A-212ENST00000590260 C20orf78Q9BR46 151 aa11.78□□□□□ -0.52
DDX39A-212ENST00000590260 CDC42SE2Q9NRR3 84 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms