RNA–Protein interactions for RNA: ENST00000590020.1

NEDD4L-227, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-227ENST00000590020 FMC1Q96HJ9 113 aa7.65□□□□□ -1.18
NEDD4L-227ENST00000590020 ACTR3CQ9C0K3 210 aaPredicted RBP7.65□□□□□ -1.18
NEDD4L-227ENST00000590020 H0Y9J4 135 aa7.64□□□□□ -1.19
NEDD4L-227ENST00000590020 KRTAP1-4P0C5Y4 121 aa7.64□□□□□ -1.19
NEDD4L-227ENST00000590020 BCL2P10415 239 aa7.64□□□□□ -1.19
NEDD4L-227ENST00000590020 XCL1P47992 114 aa7.64□□□□□ -1.19
NEDD4L-227ENST00000590020 ZNF726P1Q15940 193 aa7.64□□□□□ -1.19
NEDD4L-227ENST00000590020 C9orf116Q5BN46 136 aaPredicted RBP7.64□□□□□ -1.19
NEDD4L-227ENST00000590020 AP1S3Q96PC3 154 aa7.64□□□□□ -1.19
NEDD4L-227ENST00000590020 SSBP4Q9BWG4 385 aaPredicted RBP7.64□□□□□ -1.19
NEDD4L-227ENST00000590020 MUC17Q685J3 4493 aa7.64□□□□□ -1.19
NEDD4L-227ENST00000590020 IGLV1-50A0A075B6I6 118 aa7.63□□□□□ -1.19
NEDD4L-227ENST00000590020 PET100P0DJ07 73 aa7.63□□□□□ -1.19
NEDD4L-227ENST00000590020 UBE2D1P51668 147 aa7.63□□□□□ -1.19
NEDD4L-227ENST00000590020 SYCNQ0VAF6 134 aa7.63□□□□□ -1.19
NEDD4L-227ENST00000590020 KRTAP11-1Q8IUC1 163 aa7.63□□□□□ -1.19
NEDD4L-227ENST00000590020 PKIGQ9Y2B9 76 aa7.63□□□□□ -1.19
NEDD4L-227ENST00000590020 LOC107984640A0A0U1RRK4 108 aa7.62□□□□□ -1.19
NEDD4L-227ENST00000590020 OR5AL1P0C617 328 aa7.62□□□□□ -1.19
NEDD4L-227ENST00000590020 PSMG3Q9BT73 122 aaPredicted RBP7.62□□□□□ -1.19
NEDD4L-227ENST00000590020 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.61□□□□□ -1.19
NEDD4L-227ENST00000590020 IGKV2-29A2NJV5 120 aaPredicted RBP7.61□□□□□ -1.19
NEDD4L-227ENST00000590020 MBP02144 154 aa7.61□□□□□ -1.19
NEDD4L-227ENST00000590020 COTL1Q14019 142 aa7.61□□□□□ -1.19
NEDD4L-227ENST00000590020 AMMECR1LQ6DCA0 310 aa7.61□□□□□ -1.19
NEDD4L-227ENST00000590020 RNASEKQ6P5S7 137 aaKnown RBP7.61□□□□□ -1.19
NEDD4L-227ENST00000590020 PGLYRP4Q96LB8 373 aa7.61□□□□□ -1.19
NEDD4L-227ENST00000590020 A0A087WZ39 114 aa7.6□□□□□ -1.19
NEDD4L-227ENST00000590020 TRAV1-1A0A0B4J248 108 aa7.6□□□□□ -1.19
NEDD4L-227ENST00000590020 IGHV1-58A0A0C4DH39 117 aa7.6□□□□□ -1.19
NEDD4L-227ENST00000590020 ZNF561-AS1K7EIQ3 104 aa7.6□□□□□ -1.19
NEDD4L-227ENST00000590020 CCL25O15444 150 aa7.6□□□□□ -1.19
NEDD4L-227ENST00000590020 EIF5AP63241 154 aaKnown RBP7.6□□□□□ -1.19
NEDD4L-227ENST00000590020 RASL11AQ6T310 242 aa7.6□□□□□ -1.19
NEDD4L-227ENST00000590020 TPPP3Q9BW30 176 aa7.6□□□□□ -1.19
NEDD4L-227ENST00000590020 TNFSF18Q9UNG2 199 aa7.6□□□□□ -1.19
NEDD4L-227ENST00000590020 CXCL1P09341 107 aa7.59□□□□□ -1.19
NEDD4L-227ENST00000590020 AKR1C3P42330 323 aa7.59□□□□□ -1.19
NEDD4L-227ENST00000590020 CAMPP49913 170 aa7.59□□□□□ -1.19
NEDD4L-227ENST00000590020 DEFA1P59665 94 aa7.59□□□□□ -1.19
NEDD4L-227ENST00000590020 SERF2P84101 59 aa7.59□□□□□ -1.19
NEDD4L-227ENST00000590020 RPL18AQ02543 176 aaKnown RBP7.59□□□□□ -1.19
NEDD4L-227ENST00000590020 MZT2BQ6NZ67 158 aa7.59□□□□□ -1.19
NEDD4L-227ENST00000590020 IGLV4-69A0A075B6H9 119 aa7.58□□□□□ -1.2
NEDD4L-227ENST00000590020 CTXND1A0A1B0GTU2 59 aa7.58□□□□□ -1.2
NEDD4L-227ENST00000590020 SSNA1O43805 119 aa7.58□□□□□ -1.2
NEDD4L-227ENST00000590020 Q6ZNX1 250 aa7.58□□□□□ -1.2
NEDD4L-227ENST00000590020 KRTAP9-9Q9BYP9 154 aa7.58□□□□□ -1.2
NEDD4L-227ENST00000590020 KRTAP9-4Q9BYQ2 154 aa7.58□□□□□ -1.2
NEDD4L-227ENST00000590020 NKX6-2Q9C056 277 aaPredicted RBP7.58□□□□□ -1.2
NEDD4L-227ENST00000590020 NIT2Q9NQR4 276 aa7.58□□□□□ -1.2
NEDD4L-227ENST00000590020 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.57□□□□□ -1.2
NEDD4L-227ENST00000590020 FGF6P10767 208 aa7.57□□□□□ -1.2
NEDD4L-227ENST00000590020 MEF2BQ02080 365 aaPredicted RBP7.57□□□□□ -1.2
NEDD4L-227ENST00000590020 CST9LP1Q5W188 147 aa7.57□□□□□ -1.2
NEDD4L-227ENST00000590020 OR5A1Q8NGJ0 315 aa7.57□□□□□ -1.2
NEDD4L-227ENST00000590020 STOML3Q8TAV4 291 aa7.57□□□□□ -1.2
NEDD4L-227ENST00000590020 ENKURQ8TC29 256 aa7.57□□□□□ -1.2
NEDD4L-227ENST00000590020 LINC00959A0A1B0GUT2 108 aa7.56□□□□□ -1.2
NEDD4L-227ENST00000590020 FAM168BA1KXE4 195 aa7.56□□□□□ -1.2
NEDD4L-227ENST00000590020 RPL13AP40429 203 aaKnown RBP7.56□□□□□ -1.2
NEDD4L-227ENST00000590020 NUP35Q8NFH5 326 aa7.56□□□□□ -1.2
NEDD4L-227ENST00000590020 OPRPNQ99935 248 aaPredicted RBP7.56□□□□□ -1.2
NEDD4L-227ENST00000590020 INMT-MINDY4F8WBC2 141 aa7.55□□□□□ -1.2
NEDD4L-227ENST00000590020 NTF3P20783 257 aa7.55□□□□□ -1.2
NEDD4L-227ENST00000590020 CCDC32Q9BV29 185 aa7.55□□□□□ -1.2
NEDD4L-227ENST00000590020 APOMO95445 188 aa7.54□□□□□ -1.2
NEDD4L-227ENST00000590020 BAGE2Q86Y30 109 aa7.54□□□□□ -1.2
NEDD4L-227ENST00000590020 ISOC2Q96AB3 205 aa7.54□□□□□ -1.2
NEDD4L-227ENST00000590020 CAMK2N2Q96S95 79 aa7.54□□□□□ -1.2
NEDD4L-227ENST00000590020 RETNLBQ9BQ08 111 aa7.54□□□□□ -1.2
NEDD4L-227ENST00000590020 MLST8Q9BVC4 326 aa7.54□□□□□ -1.2
NEDD4L-227ENST00000590020 RPL7L1Q6DKI1 246 aaKnown RBP7.53□□□□□ -1.2
NEDD4L-227ENST00000590020 MAP1LC3B2A6NCE7 125 aa7.52□□□□□ -1.21
NEDD4L-227ENST00000590020 PAGE4O60829 102 aa7.52□□□□□ -1.21
NEDD4L-227ENST00000590020 IGLC6P0CF74 106 aa7.52□□□□□ -1.21
NEDD4L-227ENST00000590020 FAM19A5Q7Z5A7 132 aaPredicted RBP7.52□□□□□ -1.21
NEDD4L-227ENST00000590020 KRTAP19-1Q8IUB9 90 aa7.52□□□□□ -1.21
NEDD4L-227ENST00000590020 RPL39LQ96EH5 51 aaKnown RBP7.52□□□□□ -1.21
NEDD4L-227ENST00000590020 MAP1LC3BQ9GZQ8 125 aa7.52□□□□□ -1.21
NEDD4L-227ENST00000590020 MED28Q9H204 178 aa7.52□□□□□ -1.21
NEDD4L-227ENST00000590020 KRTAP4-8A0A0G2JLE6 195 aa7.51□□□□□ -1.21
NEDD4L-227ENST00000590020 APCSP02743 223 aa7.51□□□□□ -1.21
NEDD4L-227ENST00000590020 MALP21145 153 aa7.51□□□□□ -1.21
NEDD4L-227ENST00000590020 SS18Q15532 418 aa7.51□□□□□ -1.21
NEDD4L-227ENST00000590020 CD164L2Q6UWJ8 174 aa7.51□□□□□ -1.21
NEDD4L-227ENST00000590020 GATD1Q8NB37 220 aa7.51□□□□□ -1.21
NEDD4L-227ENST00000590020 CDIP1Q9H305 208 aa7.51□□□□□ -1.21
NEDD4L-227ENST00000590020 BCL2L11O43521 198 aa7.5□□□□□ -1.21
NEDD4L-227ENST00000590020 H2AFB1P0C5Y9 115 aa7.5□□□□□ -1.21
NEDD4L-227ENST00000590020 FHITP49789 147 aa7.5□□□□□ -1.21
NEDD4L-227ENST00000590020 OR2D3Q8NGH3 330 aa7.5□□□□□ -1.21
NEDD4L-227ENST00000590020 TMEM101Q96IK0 257 aa7.5□□□□□ -1.21
NEDD4L-227ENST00000590020 TCEAL7Q9BRU2 100 aa7.5□□□□□ -1.21
NEDD4L-227ENST00000590020 A0A1B0GV50 99 aa7.49□□□□□ -1.21
NEDD4L-227ENST00000590020 H7C423 109 aa7.49□□□□□ -1.21
NEDD4L-227ENST00000590020 AKR1C8PQ5T2L2 129 aa7.49□□□□□ -1.21
NEDD4L-227ENST00000590020 LYZL1Q6UWQ5 148 aa7.49□□□□□ -1.21
NEDD4L-227ENST00000590020 BTF3L4Q96K17 158 aa7.49□□□□□ -1.21
NEDD4L-227ENST00000590020 CARHSP1Q9Y2V2 147 aaKnown RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms