RNA–Protein interactions for RNA: ENST00000589706.1

SMAD4-208, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-208ENST00000589706 DPH3P1Q9H4G8 78 aa4.31□□□□□ -1.72
SMAD4-208ENST00000589706 FAM236DA0A1B0GTK5 79 aa4.3□□□□□ -1.72
SMAD4-208ENST00000589706 hADV29S1A0JD25 119 aa4.3□□□□□ -1.72
SMAD4-208ENST00000589706 D6R8Y8 96 aa4.3□□□□□ -1.72
SMAD4-208ENST00000589706 K7EMI3 77 aa4.3□□□□□ -1.72
SMAD4-208ENST00000589706 NXPH4O95158 308 aa4.3□□□□□ -1.72
SMAD4-208ENST00000589706 OXTP01178 125 aa4.3□□□□□ -1.72
SMAD4-208ENST00000589706 FAM236CP0DP71 79 aa4.3□□□□□ -1.72
SMAD4-208ENST00000589706 HERVK_113P61574 105 aa4.3□□□□□ -1.72
SMAD4-208ENST00000589706 CD164Q04900 197 aa4.3□□□□□ -1.72
SMAD4-208ENST00000589706 ECSCRQ19T08 205 aa4.3□□□□□ -1.72
SMAD4-208ENST00000589706 VMA21Q3ZAQ7 101 aa4.3□□□□□ -1.72
SMAD4-208ENST00000589706 FAM201AQ5SY85 155 aa4.3□□□□□ -1.72
SMAD4-208ENST00000589706 FAM27BQ5VT28 67 aa4.3□□□□□ -1.72
SMAD4-208ENST00000589706 C2orf82Q6UX34 121 aa4.3□□□□□ -1.72
SMAD4-208ENST00000589706 MDP1Q86V88 176 aa4.3□□□□□ -1.72
SMAD4-208ENST00000589706 NUP37Q8NFH4 326 aa4.3□□□□□ -1.72
SMAD4-208ENST00000589706 KRTAP4-7Q9BYR0 210 aa4.3□□□□□ -1.72
SMAD4-208ENST00000589706 TTTY13Q9BZ97 58 aa4.3□□□□□ -1.72
SMAD4-208ENST00000589706 Q9HAA7 133 aa4.3□□□□□ -1.72
SMAD4-208ENST00000589706 OTORQ9NRC9 128 aa4.3□□□□□ -1.72
SMAD4-208ENST00000589706 TEX49A0A1B0GTD5 131 aa4.29□□□□□ -1.72
SMAD4-208ENST00000589706 LOC389332A0A1B0GUA5 103 aa4.29□□□□□ -1.72
SMAD4-208ENST00000589706 C5orf63A6NC05 138 aa4.29□□□□□ -1.72
SMAD4-208ENST00000589706 INS-IGF2F8WCM5 200 aa4.29□□□□□ -1.72
SMAD4-208ENST00000589706 IGHV3-33P01772 117 aa4.29□□□□□ -1.72
SMAD4-208ENST00000589706 COX6CP09669 75 aa4.29□□□□□ -1.72
SMAD4-208ENST00000589706 ARMS2P0C7Q2 107 aa4.29□□□□□ -1.72
SMAD4-208ENST00000589706 CD24P25063 80 aa4.29□□□□□ -1.72
SMAD4-208ENST00000589706 CKS2P33552 79 aa4.29□□□□□ -1.72
SMAD4-208ENST00000589706 ZNF816Q0VGE8 651 aaPredicted RBP4.29□□□□□ -1.72
SMAD4-208ENST00000589706 NNATQ16517 81 aa4.29□□□□□ -1.72
SMAD4-208ENST00000589706 MRPL51Q4U2R6 128 aaKnown RBP4.29□□□□□ -1.72
SMAD4-208ENST00000589706 FAM19A1Q7Z5A9 133 aa4.29□□□□□ -1.72
SMAD4-208ENST00000589706 Q8IYB0 196 aa4.29□□□□□ -1.72
SMAD4-208ENST00000589706 DAND5Q8N907 189 aa4.29□□□□□ -1.72
SMAD4-208ENST00000589706 FXYD5Q96DB9 178 aa4.29□□□□□ -1.72
SMAD4-208ENST00000589706 EMC6Q9BV81 110 aa4.29□□□□□ -1.72
SMAD4-208ENST00000589706 MRPL35Q9NZE8 188 aaKnown RBP4.29□□□□□ -1.72
SMAD4-208ENST00000589706 DOCK11Q5JSL3 2073 aa4.29□□□□□ -1.72
SMAD4-208ENST00000589706 FREM3P0C091 2139 aa4.28□□□□□ -1.72
SMAD4-208ENST00000589706 A0A087X002 238 aa4.28□□□□□ -1.72
SMAD4-208ENST00000589706 TRAV40A0A0B4J280 105 aa4.28□□□□□ -1.72
SMAD4-208ENST00000589706 ZNF815PA8K554 130 aa4.28□□□□□ -1.72
SMAD4-208ENST00000589706 C17orf98A8MV24 154 aa4.28□□□□□ -1.72
SMAD4-208ENST00000589706 COX7A2P2O60397 106 aa4.28□□□□□ -1.72
SMAD4-208ENST00000589706 BCE1O60756 84 aa4.28□□□□□ -1.72
SMAD4-208ENST00000589706 IGHV3-30P01768 117 aa4.28□□□□□ -1.72
SMAD4-208ENST00000589706 TCRAP04437 139 aa4.28□□□□□ -1.72
SMAD4-208ENST00000589706 IGHV3-30-5P0DP03 117 aa4.28□□□□□ -1.72
SMAD4-208ENST00000589706 CCL3P10147 92 aa4.28□□□□□ -1.72
SMAD4-208ENST00000589706 SUB1P53999 127 aaKnown RBP eCLIP4.28□□□□□ -1.72
SMAD4-208ENST00000589706 ATP5EP56381 51 aaPredicted RBP4.28□□□□□ -1.72
SMAD4-208ENST00000589706 PCBD1P61457 104 aa4.28□□□□□ -1.72
SMAD4-208ENST00000589706 C2orf83Q53S99 150 aa4.28□□□□□ -1.72
SMAD4-208ENST00000589706 C10orf113Q5VZT2 155 aa4.28□□□□□ -1.72
SMAD4-208ENST00000589706 CEMP1Q6PRD7 247 aaPredicted RBP4.28□□□□□ -1.72
SMAD4-208ENST00000589706 SCGB1D4Q6XE38 83 aa4.28□□□□□ -1.72
SMAD4-208ENST00000589706 LINC00322Q6ZN03 302 aaPredicted RBP4.28□□□□□ -1.72
SMAD4-208ENST00000589706 Q86TA4 180 aa4.28□□□□□ -1.72
SMAD4-208ENST00000589706 LINC00311Q8N616 119 aa4.28□□□□□ -1.72
SMAD4-208ENST00000589706 SLC25A29Q8N8R3 303 aa4.28□□□□□ -1.72
SMAD4-208ENST00000589706 C11orf45Q8TAV5 145 aa4.28□□□□□ -1.72
SMAD4-208ENST00000589706 SRSF12Q8WXF0 261 aaKnown RBP4.28□□□□□ -1.72
SMAD4-208ENST00000589706 DSCR8Q96T75 97 aa4.28□□□□□ -1.72
SMAD4-208ENST00000589706 ALPK2Q86TB3 2170 aa4.28□□□□□ -1.72
SMAD4-208ENST00000589706 CADP27708 2225 aa4.27□□□□□ -1.73
SMAD4-208ENST00000589706 BIRC6Q9NR09 4857 aa4.27□□□□□ -1.73
SMAD4-208ENST00000589706 HEATR5BQ9P2D3 2071 aa4.27□□□□□ -1.73
SMAD4-208ENST00000589706 IGHV3-38A0A0C4DH36 116 aa4.27□□□□□ -1.73
SMAD4-208ENST00000589706 A0A0J9YY99 117 aa4.27□□□□□ -1.73
SMAD4-208ENST00000589706 IGKV3-11P04433 115 aa4.27□□□□□ -1.73
SMAD4-208ENST00000589706 PMAIP1Q13794 54 aa4.27□□□□□ -1.73
SMAD4-208ENST00000589706 NOTCH2NLQ7Z3S9 236 aa4.27□□□□□ -1.73
SMAD4-208ENST00000589706 TMEM75Q8N9X5 138 aa4.27□□□□□ -1.73
SMAD4-208ENST00000589706 EXPH5Q8NEV8 1989 aa4.26□□□□□ -1.73
SMAD4-208ENST00000589706 IGLV3-32A0A0A0MS00 114 aa4.26□□□□□ -1.73
SMAD4-208ENST00000589706 TMEM30CPA0ZSE6 113 aa4.26□□□□□ -1.73
SMAD4-208ENST00000589706 KNCNA6PVL3 124 aa4.26□□□□□ -1.73
SMAD4-208ENST00000589706 IGLV1-44P01699 117 aa4.26□□□□□ -1.73
SMAD4-208ENST00000589706 INAFM2P0DMQ5 153 aa4.26□□□□□ -1.73
SMAD4-208ENST00000589706 SAA4P35542 130 aa4.26□□□□□ -1.73
SMAD4-208ENST00000589706 SYNJ2BPP57105 145 aa4.26□□□□□ -1.73
SMAD4-208ENST00000589706 C18orf65Q6ZTR6 163 aa4.26□□□□□ -1.73
SMAD4-208ENST00000589706 MED12LQ86YW9 2145 aa4.26□□□□□ -1.73
SMAD4-208ENST00000589706 UBALD1Q8TB05 177 aa4.26□□□□□ -1.73
SMAD4-208ENST00000589706 C10orf105Q8TEF2 133 aa4.26□□□□□ -1.73
SMAD4-208ENST00000589706 TMEM263Q8WUH6 116 aaKnown RBP4.26□□□□□ -1.73
SMAD4-208ENST00000589706 PROK2Q9HC23 129 aa4.26□□□□□ -1.73
SMAD4-208ENST00000589706 RPUSD1Q9UJJ7 312 aaKnown RBP4.26□□□□□ -1.73
SMAD4-208ENST00000589706 IGKV3D-11A0A0A0MRZ8 115 aa4.25□□□□□ -1.73
SMAD4-208ENST00000589706 TRBV7-1A0A0A6YYK4 115 aa4.25□□□□□ -1.73
SMAD4-208ENST00000589706 H7C423 109 aa4.25□□□□□ -1.73
SMAD4-208ENST00000589706 LYZL6O75951 148 aa4.25□□□□□ -1.73
SMAD4-208ENST00000589706 CRIP2P52943 208 aaPredicted RBP4.25□□□□□ -1.73
SMAD4-208ENST00000589706 LAGE3Q14657 143 aa4.25□□□□□ -1.73
SMAD4-208ENST00000589706 ORMDL2Q53FV1 153 aa4.25□□□□□ -1.73
SMAD4-208ENST00000589706 Q6JHZ5 121 aa4.25□□□□□ -1.73
SMAD4-208ENST00000589706 LYPD1Q8N2G4 141 aa4.25□□□□□ -1.73
SMAD4-208ENST00000589706 ZNRF1Q8ND25 227 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms