RNA–Protein interactions for RNA: ENST00000589675.5

DDX39A-210, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-210ENST00000589675 CLPSL2Q6UWE3 100 aa7.18□□□□□ -1.26
DDX39A-210ENST00000589675 SDIM1Q6ZPB5 146 aa7.18□□□□□ -1.26
DDX39A-210ENST00000589675 IGLV4-60A0A075B6I1 120 aa7.17□□□□□ -1.26
DDX39A-210ENST00000589675 COTL1Q14019 142 aa7.17□□□□□ -1.26
DDX39A-210ENST00000589675 OCC1Q8TAD7 63 aa7.17□□□□□ -1.26
DDX39A-210ENST00000589675 RPP21Q9H633 154 aaKnown RBP7.17□□□□□ -1.26
DDX39A-210ENST00000589675 K7EN84 100 aa7.16□□□□□ -1.26
DDX39A-210ENST00000589675 CIRBPQ14011 172 aaKnown RBP7.16□□□□□ -1.26
DDX39A-210ENST00000589675 TWIST1Q15672 202 aa7.16□□□□□ -1.26
DDX39A-210ENST00000589675 GATD1Q8NB37 220 aa7.16□□□□□ -1.26
DDX39A-210ENST00000589675 GFRA4Q9GZZ7 299 aa7.16□□□□□ -1.26
DDX39A-210ENST00000589675 FAT3Q8TDW7 4589 aa7.16□□□□□ -1.26
DDX39A-210ENST00000589675 IGLV10-54A0A075B6I4 117 aa7.15□□□□□ -1.26
DDX39A-210ENST00000589675 TMEM250H0YL14 139 aa7.15□□□□□ -1.26
DDX39A-210ENST00000589675 UBE2L6O14933 153 aa7.15□□□□□ -1.26
DDX39A-210ENST00000589675 NCR2O95944 276 aa7.15□□□□□ -1.26
DDX39A-210ENST00000589675 AMTP48728 403 aa7.15□□□□□ -1.26
DDX39A-210ENST00000589675 RPL37AP61513 92 aaKnown RBP7.15□□□□□ -1.26
DDX39A-210ENST00000589675 TEX261Q6UWH6 196 aa7.15□□□□□ -1.26
DDX39A-210ENST00000589675 Q6ZNX1 250 aa7.15□□□□□ -1.26
DDX39A-210ENST00000589675 RNASE7Q9H1E1 156 aaKnown RBP7.15□□□□□ -1.26
DDX39A-210ENST00000589675 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.15□□□□□ -1.26
DDX39A-210ENST00000589675 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.14□□□□□ -1.27
DDX39A-210ENST00000589675 hDV102S1A0JD36 115 aa7.14□□□□□ -1.27
DDX39A-210ENST00000589675 H7C423 109 aa7.14□□□□□ -1.27
DDX39A-210ENST00000589675 SERTAD4-AS1Q5TG53 156 aa7.14□□□□□ -1.27
DDX39A-210ENST00000589675 FAM231DQ6ZW35 169 aa7.14□□□□□ -1.27
DDX39A-210ENST00000589675 SMIM15Q7Z3B0 74 aa7.14□□□□□ -1.27
DDX39A-210ENST00000589675 AKAP14Q86UN6 197 aa7.14□□□□□ -1.27
DDX39A-210ENST00000589675 LYPD6BQ8NI32 183 aa7.14□□□□□ -1.27
DDX39A-210ENST00000589675 GTSF1Q8WW33 167 aa7.14□□□□□ -1.27
DDX39A-210ENST00000589675 RNF185Q96GF1 192 aa7.14□□□□□ -1.27
DDX39A-210ENST00000589675 AP5S1Q9NUS5 200 aa7.14□□□□□ -1.27
DDX39A-210ENST00000589675 IGHV3-64A0A075B6Q5 118 aa7.13□□□□□ -1.27
DDX39A-210ENST00000589675 PANO1I0J062 215 aa7.13□□□□□ -1.27
DDX39A-210ENST00000589675 NDUFS6O75380 124 aaKnown RBP7.13□□□□□ -1.27
DDX39A-210ENST00000589675 FOXA3P55318 350 aaPredicted RBP7.13□□□□□ -1.27
DDX39A-210ENST00000589675 BLOC1S1P78537 153 aa7.13□□□□□ -1.27
DDX39A-210ENST00000589675 FAM210AQ96ND0 272 aa7.13□□□□□ -1.27
DDX39A-210ENST00000589675 hCG_2014768A0A024R1R8 64 aa7.12□□□□□ -1.27
DDX39A-210ENST00000589675 TRAV26-2A0A0B4J265 109 aa7.12□□□□□ -1.27
DDX39A-210ENST00000589675 A8MWL6 223 aa7.12□□□□□ -1.27
DDX39A-210ENST00000589675 SLPIP03973 132 aa7.12□□□□□ -1.27
DDX39A-210ENST00000589675 CT83Q5H943 113 aa7.12□□□□□ -1.27
DDX39A-210ENST00000589675 CFAP161Q6P656 301 aa7.12□□□□□ -1.27
DDX39A-210ENST00000589675 TRBV6-5A0A0K0K1A5 114 aa7.11□□□□□ -1.27
DDX39A-210ENST00000589675 GATCO43716 136 aaKnown RBP7.11□□□□□ -1.27
DDX39A-210ENST00000589675 C15orf56Q8N910 161 aa7.11□□□□□ -1.27
DDX39A-210ENST00000589675 RPL39LQ96EH5 51 aaKnown RBP7.11□□□□□ -1.27
DDX39A-210ENST00000589675 GAGE12HA6NDE8 117 aa7.1□□□□□ -1.27
DDX39A-210ENST00000589675 SDHAF1A6NFY7 115 aa7.1□□□□□ -1.27
DDX39A-210ENST00000589675 APCSP02743 223 aa7.1□□□□□ -1.27
DDX39A-210ENST00000589675 ZNF25P17030 456 aaPredicted RBP7.1□□□□□ -1.27
DDX39A-210ENST00000589675 AMMECR1LQ6DCA0 310 aa7.1□□□□□ -1.27
DDX39A-210ENST00000589675 SPACA4Q8TDM5 124 aa7.1□□□□□ -1.27
DDX39A-210ENST00000589675 FAM231BA6NCW3 169 aa7.09□□□□□ -1.27
DDX39A-210ENST00000589675 I3L3M4 83 aa7.09□□□□□ -1.27
DDX39A-210ENST00000589675 FGF6P10767 208 aa7.09□□□□□ -1.27
DDX39A-210ENST00000589675 HNRNPA3P51991 378 aaKnown RBP7.09□□□□□ -1.27
DDX39A-210ENST00000589675 ALKAL2Q6UX46 152 aa7.09□□□□□ -1.27
DDX39A-210ENST00000589675 A0A087WYN8 130 aa7.08□□□□□ -1.28
DDX39A-210ENST00000589675 RPS10P46783 165 aaKnown RBP7.08□□□□□ -1.28
DDX39A-210ENST00000589675 RNASEKQ6P5S7 137 aaKnown RBP7.08□□□□□ -1.28
DDX39A-210ENST00000589675 Q6ZRU5 148 aa7.08□□□□□ -1.28
DDX39A-210ENST00000589675 OR5A1Q8NGJ0 315 aa7.08□□□□□ -1.28
DDX39A-210ENST00000589675 CHCHD10Q8WYQ3 142 aaPredicted RBP7.08□□□□□ -1.28
DDX39A-210ENST00000589675 BORCS7Q96B45 105 aa7.08□□□□□ -1.28
DDX39A-210ENST00000589675 TMEM191AQ9H0A3 160 aa7.08□□□□□ -1.28
DDX39A-210ENST00000589675 PLAC8Q9NZF1 115 aa7.08□□□□□ -1.28
DDX39A-210ENST00000589675 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.07□□□□□ -1.28
DDX39A-210ENST00000589675 GVQW2A0A096LPI5 108 aaPredicted RBP7.07□□□□□ -1.28
DDX39A-210ENST00000589675 A0A1B0GUT8 65 aa7.07□□□□□ -1.28
DDX39A-210ENST00000589675 IGKV2-29A2NJV5 120 aaPredicted RBP7.07□□□□□ -1.28
DDX39A-210ENST00000589675 ESDP10768 282 aa7.07□□□□□ -1.28
DDX39A-210ENST00000589675 PMCHP20382 165 aa7.07□□□□□ -1.28
DDX39A-210ENST00000589675 LINC01551Q86U37 167 aa7.07□□□□□ -1.28
DDX39A-210ENST00000589675 TSKUQ8WUA8 353 aa7.07□□□□□ -1.28
DDX39A-210ENST00000589675 DPH3Q96FX2 82 aa7.07□□□□□ -1.28
DDX39A-210ENST00000589675 OSTCQ9NRP0 149 aa7.07□□□□□ -1.28
DDX39A-210ENST00000589675 IGKV3OR2-268A0A0C4DH90 116 aa7.06□□□□□ -1.28
DDX39A-210ENST00000589675 TRBV27A0A0K0K1C4 114 aa7.06□□□□□ -1.28
DDX39A-210ENST00000589675 HIGD1CA8MV81 97 aa7.06□□□□□ -1.28
DDX39A-210ENST00000589675 TSHBP01222 138 aa7.06□□□□□ -1.28
DDX39A-210ENST00000589675 CHTF8P0CG12 524 aa7.06□□□□□ -1.28
DDX39A-210ENST00000589675 POLR2KP53803 58 aaKnown RBP7.06□□□□□ -1.28
DDX39A-210ENST00000589675 FOXI1Q12951 378 aa7.06□□□□□ -1.28
DDX39A-210ENST00000589675 MRPL52Q86TS9 123 aaKnown RBP7.06□□□□□ -1.28
DDX39A-210ENST00000589675 MRAP2Q96G30 205 aa7.06□□□□□ -1.28
DDX39A-210ENST00000589675 TMEM101Q96IK0 257 aa7.06□□□□□ -1.28
DDX39A-210ENST00000589675 BTF3L4Q96K17 158 aa7.06□□□□□ -1.28
DDX39A-210ENST00000589675 SMIM7Q9BQ49 75 aa7.06□□□□□ -1.28
DDX39A-210ENST00000589675 EIF5A2Q9GZV4 153 aaKnown RBP7.06□□□□□ -1.28
DDX39A-210ENST00000589675 ST20Q9HBF5 79 aa7.06□□□□□ -1.28
DDX39A-210ENST00000589675 HMCN2Q8NDA2 5059 aa7.06□□□□□ -1.28
DDX39A-210ENST00000589675 RAB4AP20338 218 aa7.05□□□□□ -1.28
DDX39A-210ENST00000589675 COX6A2Q02221 97 aa7.05□□□□□ -1.28
DDX39A-210ENST00000589675 LINC00959A0A1B0GUT2 108 aa7.04□□□□□ -1.28
DDX39A-210ENST00000589675 ZNF727A8MUV8 499 aa7.04□□□□□ -1.28
DDX39A-210ENST00000589675 GAS8-AS1O95177 125 aa7.04□□□□□ -1.28
DDX39A-210ENST00000589675 CEBPGP53567 150 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms