RNA–Protein interactions for RNA: ENST00000589614.5

TREM1-204, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TREM1, Length 772 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-204ENST00000589614 ZNF56Q15929 161 aa5.56□□□□□ -1.52
TREM1-204ENST00000589614 PRNTQ86SH4 94 aa5.56□□□□□ -1.52
TREM1-204ENST00000589614 KRTAP9-9Q9BYP9 154 aa5.56□□□□□ -1.52
TREM1-204ENST00000589614 WDR61Q9GZS3 305 aaKnown RBP5.56□□□□□ -1.52
TREM1-204ENST00000589614 C9orf116Q5BN46 136 aaPredicted RBP5.55□□□□□ -1.52
TREM1-204ENST00000589614 LOC107984640A0A0U1RRK4 108 aa5.54□□□□□ -1.52
TREM1-204ENST00000589614 EIF3GO75821 320 aaKnown RBP eCLIP5.54□□□□□ -1.52
TREM1-204ENST00000589614 FGF6P10767 208 aa5.54□□□□□ -1.52
TREM1-204ENST00000589614 PHF5AQ7RTV0 110 aaKnown RBP5.54□□□□□ -1.52
TREM1-204ENST00000589614 NRACQ8N912 160 aa5.54□□□□□ -1.52
TREM1-204ENST00000589614 TSKUQ8WUA8 353 aa5.54□□□□□ -1.52
TREM1-204ENST00000589614 CHCHD10Q8WYQ3 142 aaPredicted RBP5.54□□□□□ -1.52
TREM1-204ENST00000589614 TMEM243Q9BU79 118 aa5.54□□□□□ -1.52
TREM1-204ENST00000589614 MED28Q9H204 178 aa5.54□□□□□ -1.52
TREM1-204ENST00000589614 RPP21Q9H633 154 aaKnown RBP5.54□□□□□ -1.52
TREM1-204ENST00000589614 FLVCR2Q9UPI3 526 aa5.54□□□□□ -1.52
TREM1-204ENST00000589614 GRIFINA4D1Z8 144 aa5.53□□□□□ -1.52
TREM1-204ENST00000589614 TMBIM6P55061 237 aa5.53□□□□□ -1.52
TREM1-204ENST00000589614 SYCNQ0VAF6 134 aa5.53□□□□□ -1.52
TREM1-204ENST00000589614 IL15RAQ13261 267 aa5.53□□□□□ -1.52
TREM1-204ENST00000589614 SPCS2Q15005 226 aa5.53□□□□□ -1.52
TREM1-204ENST00000589614 FAM162BQ5T6X4 162 aa5.53□□□□□ -1.52
TREM1-204ENST00000589614 RBM38Q9H0Z9 239 aaKnown RBP5.53□□□□□ -1.52
TREM1-204ENST00000589614 A0A087WZ39 114 aa5.52□□□□□ -1.53
TREM1-204ENST00000589614 IGHV1-58A0A0C4DH39 117 aa5.52□□□□□ -1.53
TREM1-204ENST00000589614 FAM25EA8MYX2 175 aa5.52□□□□□ -1.53
TREM1-204ENST00000589614 M0R036 132 aa5.52□□□□□ -1.53
TREM1-204ENST00000589614 CFC1BP0CG36 223 aa5.52□□□□□ -1.53
TREM1-204ENST00000589614 EPDR1Q9UM22 224 aa5.52□□□□□ -1.53
TREM1-204ENST00000589614 NAP1L6A6NFF2 107 aa5.51□□□□□ -1.53
TREM1-204ENST00000589614 H3BMQ9 156 aa5.51□□□□□ -1.53
TREM1-204ENST00000589614 CRIP1P50238 77 aa5.51□□□□□ -1.53
TREM1-204ENST00000589614 PYDC2Q56P42 97 aa5.51□□□□□ -1.53
TREM1-204ENST00000589614 COX8CQ7Z4L0 72 aa5.51□□□□□ -1.53
TREM1-204ENST00000589614 LINC00526Q96FQ7 95 aa5.51□□□□□ -1.53
TREM1-204ENST00000589614 ARL2-SNX15V9GYD0 113 aa5.51□□□□□ -1.53
TREM1-204ENST00000589614 SSPOA2VEC9 5147 aa5.5□□□□□ -1.53
TREM1-204ENST00000589614 IGLV7-46A0A075B6I9 117 aa5.5□□□□□ -1.53
TREM1-204ENST00000589614 UBE2L6O14933 153 aa5.5□□□□□ -1.53
TREM1-204ENST00000589614 TWIST1Q15672 202 aa5.5□□□□□ -1.53
TREM1-204ENST00000589614 ASB16-AS1Q495Z4 193 aa5.5□□□□□ -1.53
TREM1-204ENST00000589614 ISOC2Q96AB3 205 aa5.5□□□□□ -1.53
TREM1-204ENST00000589614 PGLYRP4Q96LB8 373 aa5.5□□□□□ -1.53
TREM1-204ENST00000589614 SDHCQ99643 169 aaPredicted RBP5.5□□□□□ -1.53
TREM1-204ENST00000589614 RETNLBQ9BQ08 111 aa5.5□□□□□ -1.53
TREM1-204ENST00000589614 V9GYH0 126 aa5.5□□□□□ -1.53
TREM1-204ENST00000589614 IGKV3OR2-268A0A0C4DH90 116 aa5.49□□□□□ -1.53
TREM1-204ENST00000589614 A0A1W2PPV4 95 aa5.49□□□□□ -1.53
TREM1-204ENST00000589614 SH2D1AO60880 128 aa5.49□□□□□ -1.53
TREM1-204ENST00000589614 RPL12P30050 165 aaKnown RBP5.49□□□□□ -1.53
TREM1-204ENST00000589614 KRTAP11-1Q8IUC1 163 aa5.49□□□□□ -1.53
TREM1-204ENST00000589614 ZNF471Q9BX82 626 aaPredicted RBP5.49□□□□□ -1.53
TREM1-204ENST00000589614 APOMO95445 188 aa5.48□□□□□ -1.53
TREM1-204ENST00000589614 ATP6V1G2O95670 118 aa5.48□□□□□ -1.53
TREM1-204ENST00000589614 ARL14EPLP0DKL9 152 aa5.48□□□□□ -1.53
TREM1-204ENST00000589614 BCL2P10415 239 aa5.48□□□□□ -1.53
TREM1-204ENST00000589614 CNPY1Q3B7I2 92 aa5.48□□□□□ -1.53
TREM1-204ENST00000589614 OR10AG1Q8NH19 301 aa5.48□□□□□ -1.53
TREM1-204ENST00000589614 KRTAP9-3Q9BYQ3 159 aa5.48□□□□□ -1.53
TREM1-204ENST00000589614 KRTAP4-1Q9BYQ7 146 aa5.48□□□□□ -1.53
TREM1-204ENST00000589614 IGLV4-69A0A075B6H9 119 aa5.47□□□□□ -1.53
TREM1-204ENST00000589614 TMSB15BA0A087X1C1 80 aa5.47□□□□□ -1.53
TREM1-204ENST00000589614 M0QY20 66 aa5.47□□□□□ -1.53
TREM1-204ENST00000589614 STAG3L2P0CL84 134 aa5.47□□□□□ -1.53
TREM1-204ENST00000589614 STAG3L3P0CL85 134 aa5.47□□□□□ -1.53
TREM1-204ENST00000589614 Q86TA4 180 aa5.47□□□□□ -1.53
TREM1-204ENST00000589614 NUP35Q8NFH5 326 aa5.47□□□□□ -1.53
TREM1-204ENST00000589614 A0A087X002 238 aa5.46□□□□□ -1.54
TREM1-204ENST00000589614 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.46□□□□□ -1.54
TREM1-204ENST00000589614 HMGB3O15347 200 aaKnown RBP5.46□□□□□ -1.54
TREM1-204ENST00000589614 SMIM17P0DL12 118 aa5.46□□□□□ -1.54
TREM1-204ENST00000589614 CTAG1AP78358 180 aa5.46□□□□□ -1.54
TREM1-204ENST00000589614 MEF2BQ02080 365 aaPredicted RBP5.46□□□□□ -1.54
TREM1-204ENST00000589614 EIF5AL1Q6IS14 154 aaKnown RBP5.46□□□□□ -1.54
TREM1-204ENST00000589614 LINC00173Q6ZV60 143 aa5.46□□□□□ -1.54
TREM1-204ENST00000589614 TYMSOSQ8TAI1 123 aa5.46□□□□□ -1.54
TREM1-204ENST00000589614 ZFP30Q9Y2G7 519 aa5.46□□□□□ -1.54
TREM1-204ENST00000589614 IGLV5-37A0A075B6J1 123 aa5.45□□□□□ -1.54
TREM1-204ENST00000589614 SNAI2O43623 268 aa5.45□□□□□ -1.54
TREM1-204ENST00000589614 CXCL1P09341 107 aa5.45□□□□□ -1.54
TREM1-204ENST00000589614 BTCP35070 178 aa5.45□□□□□ -1.54
TREM1-204ENST00000589614 XCL1P47992 114 aa5.45□□□□□ -1.54
TREM1-204ENST00000589614 RPL18AQ02543 176 aaKnown RBP5.45□□□□□ -1.54
TREM1-204ENST00000589614 SCGB1C1Q8TD33 95 aa5.45□□□□□ -1.54
TREM1-204ENST00000589614 AP1S3Q96PC3 154 aa5.45□□□□□ -1.54
TREM1-204ENST00000589614 PPDPFQ9H3Y8 114 aa5.45□□□□□ -1.54
TREM1-204ENST00000589614 TMEM167BQ9NRX6 74 aa5.45□□□□□ -1.54
TREM1-204ENST00000589614 USH2AO75445 5202 aa5.45□□□□□ -1.54
TREM1-204ENST00000589614 A0A1W2PRE2 83 aa5.44□□□□□ -1.54
TREM1-204ENST00000589614 ZNF861PO60384 105 aa5.44□□□□□ -1.54
TREM1-204ENST00000589614 OR5AL1P0C617 328 aa5.44□□□□□ -1.54
TREM1-204ENST00000589614 GCHFRP30047 84 aa5.44□□□□□ -1.54
TREM1-204ENST00000589614 NKX2-5P52952 324 aaPredicted RBP5.44□□□□□ -1.54
TREM1-204ENST00000589614 MT1HP80294 61 aa5.44□□□□□ -1.54
TREM1-204ENST00000589614 COTL1Q14019 142 aa5.44□□□□□ -1.54
TREM1-204ENST00000589614 SPANXN1Q5VSR9 72 aa5.44□□□□□ -1.54
TREM1-204ENST00000589614 OR5A1Q8NGJ0 315 aa5.44□□□□□ -1.54
TREM1-204ENST00000589614 C2orf48Q96LS8 159 aa5.44□□□□□ -1.54
TREM1-204ENST00000589614 CENPXA8MT69 81 aa5.43□□□□□ -1.54
TREM1-204ENST00000589614 H7C423 109 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms