RNA–Protein interactions for RNA: ENST00000589548.5

CXXC1-211, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-211ENST00000589548 IGLC6P0CF74 106 aa11.04□□□□□ -0.64
CXXC1-211ENST00000589548 AMTP48728 403 aa11.04□□□□□ -0.64
CXXC1-211ENST00000589548 Q6ZRP5 223 aa11.04□□□□□ -0.64
CXXC1-211ENST00000589548 TPPP3Q9BW30 176 aa11.03□□□□□ -0.64
CXXC1-211ENST00000589548 FER1L6-AS1Q8NA97 138 aa11.02□□□□□ -0.65
CXXC1-211ENST00000589548 LINC00526Q96FQ7 95 aa11.02□□□□□ -0.65
CXXC1-211ENST00000589548 MED28Q9H204 178 aa11.02□□□□□ -0.65
CXXC1-211ENST00000589548 NIT2Q9NQR4 276 aa11.02□□□□□ -0.65
CXXC1-211ENST00000589548 CYTL1Q9NRR1 136 aa11.02□□□□□ -0.65
CXXC1-211ENST00000589548 GIPP09681 153 aaPredicted RBP11.01□□□□□ -0.65
CXXC1-211ENST00000589548 FOXI1Q12951 378 aa11.01□□□□□ -0.65
CXXC1-211ENST00000589548 COTL1Q14019 142 aa11.01□□□□□ -0.65
CXXC1-211ENST00000589548 LINC00474Q9P2X8 69 aa11.01□□□□□ -0.65
CXXC1-211ENST00000589548 MUC2Q02817 5179 aa11□□□□□ -0.65
CXXC1-211ENST00000589548 A0A1B0GV50 99 aa11□□□□□ -0.65
CXXC1-211ENST00000589548 KRTAP9-6A0A140TA67 174 aa10.99□□□□□ -0.65
CXXC1-211ENST00000589548 G3V3Q6 166 aa10.99□□□□□ -0.65
CXXC1-211ENST00000589548 CACNG7P62955 275 aa10.98□□□□□ -0.65
CXXC1-211ENST00000589548 TMUB2Q71RG4 321 aa10.98□□□□□ -0.65
CXXC1-211ENST00000589548 PFDN1O60925 122 aa10.97□□□□□ -0.65
CXXC1-211ENST00000589548 RPL35P42766 123 aaKnown RBP10.97□□□□□ -0.65
CXXC1-211ENST00000589548 Q6ZNX1 250 aa10.97□□□□□ -0.65
CXXC1-211ENST00000589548 OR2D3Q8NGH3 330 aa10.97□□□□□ -0.65
CXXC1-211ENST00000589548 SFT2D1Q8WV19 159 aa10.97□□□□□ -0.65
CXXC1-211ENST00000589548 MBD3L1Q8WWY6 194 aa10.97□□□□□ -0.65
CXXC1-211ENST00000589548 CARD19Q96LW7 228 aa10.97□□□□□ -0.65
CXXC1-211ENST00000589548 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.96□□□□□ -0.65
CXXC1-211ENST00000589548 IGKV2-29A2NJV5 120 aaPredicted RBP10.96□□□□□ -0.65
CXXC1-211ENST00000589548 NTF3P20783 257 aa10.96□□□□□ -0.65
CXXC1-211ENST00000589548 C19orf71A6NCJ1 209 aa10.95□□□□□ -0.66
CXXC1-211ENST00000589548 FAM231BA6NCW3 169 aa10.95□□□□□ -0.66
CXXC1-211ENST00000589548 TRGC1P0CF51 173 aa10.95□□□□□ -0.66
CXXC1-211ENST00000589548 AMMECR1LQ6DCA0 310 aa10.95□□□□□ -0.66
CXXC1-211ENST00000589548 RNASEKQ6P5S7 137 aaKnown RBP10.95□□□□□ -0.66
CXXC1-211ENST00000589548 XCL1P47992 114 aa10.94□□□□□ -0.66
CXXC1-211ENST00000589548 PTTG1IPP53801 180 aa10.94□□□□□ -0.66
CXXC1-211ENST00000589548 RPS20P60866 119 aaKnown RBP10.94□□□□□ -0.66
CXXC1-211ENST00000589548 LYZL1Q6UWQ5 148 aa10.94□□□□□ -0.66
CXXC1-211ENST00000589548 GATD1Q8NB37 220 aa10.94□□□□□ -0.66
CXXC1-211ENST00000589548 FAM213BQ8TBF2 198 aa10.94□□□□□ -0.66
CXXC1-211ENST00000589548 PKIGQ9Y2B9 76 aa10.94□□□□□ -0.66
CXXC1-211ENST00000589548 FAT4Q6V0I7 4981 aa10.94□□□□□ -0.66
CXXC1-211ENST00000589548 TRAV26-2A0A0B4J265 109 aa10.93□□□□□ -0.66
CXXC1-211ENST00000589548 IGHV1-58A0A0C4DH39 117 aa10.93□□□□□ -0.66
CXXC1-211ENST00000589548 A0A0U1RQV1 116 aa10.93□□□□□ -0.66
CXXC1-211ENST00000589548 A0A1W2PNN7 141 aa10.93□□□□□ -0.66
CXXC1-211ENST00000589548 ARPC5O15511 151 aa10.93□□□□□ -0.66
CXXC1-211ENST00000589548 FGF6P10767 208 aa10.93□□□□□ -0.66
CXXC1-211ENST00000589548 CENPWQ5EE01 88 aa10.93□□□□□ -0.66
CXXC1-211ENST00000589548 KCNRGQ8N5I3 272 aa10.93□□□□□ -0.66
CXXC1-211ENST00000589548 PSORS1C2Q9UIG4 136 aa10.93□□□□□ -0.66
CXXC1-211ENST00000589548 F2Z2F3 143 aa10.92□□□□□ -0.66
CXXC1-211ENST00000589548 CCL25O15444 150 aa10.92□□□□□ -0.66
CXXC1-211ENST00000589548 OR5A1Q8NGJ0 315 aa10.92□□□□□ -0.66
CXXC1-211ENST00000589548 C11orf52Q96A22 123 aa10.92□□□□□ -0.66
CXXC1-211ENST00000589548 RPL39LQ96EH5 51 aaKnown RBP10.92□□□□□ -0.66
CXXC1-211ENST00000589548 SYCNQ0VAF6 134 aa10.91□□□□□ -0.66
CXXC1-211ENST00000589548 GAGE2BQ13066 116 aa10.91□□□□□ -0.66
CXXC1-211ENST00000589548 ZNF664Q8N3J9 261 aa10.91□□□□□ -0.66
CXXC1-211ENST00000589548 PRR26Q8N8Z3 221 aa10.91□□□□□ -0.66
CXXC1-211ENST00000589548 LINC00959A0A1B0GUT2 108 aa10.9□□□□□ -0.66
CXXC1-211ENST00000589548 H7C423 109 aa10.9□□□□□ -0.66
CXXC1-211ENST00000589548 NCR2O95944 276 aa10.9□□□□□ -0.66
CXXC1-211ENST00000589548 APCSP02743 223 aa10.89□□□□□ -0.67
CXXC1-211ENST00000589548 CTRLP40313 264 aa10.89□□□□□ -0.67
CXXC1-211ENST00000589548 RAB19A4D1S5 217 aa10.88□□□□□ -0.67
CXXC1-211ENST00000589548 IFNA1P01562 189 aa10.88□□□□□ -0.67
CXXC1-211ENST00000589548 LOC107984640A0A0U1RRK4 108 aa10.87□□□□□ -0.67
CXXC1-211ENST00000589548 UMAD1C9J7I0 102 aa10.87□□□□□ -0.67
CXXC1-211ENST00000589548 ZNF561-AS1K7EIQ3 104 aa10.87□□□□□ -0.67
CXXC1-211ENST00000589548 MT-ND6P03923 174 aa10.87□□□□□ -0.67
CXXC1-211ENST00000589548 BCL2P10415 239 aa10.87□□□□□ -0.67
CXXC1-211ENST00000589548 ZNF25P17030 456 aaPredicted RBP10.87□□□□□ -0.67
CXXC1-211ENST00000589548 CAMPP49913 170 aa10.87□□□□□ -0.67
CXXC1-211ENST00000589548 CCL20P78556 96 aa10.87□□□□□ -0.67
CXXC1-211ENST00000589548 C1orf137Q5JT78 98 aa10.87□□□□□ -0.67
CXXC1-211ENST00000589548 C9orf62Q8N4C0 152 aa10.87□□□□□ -0.67
CXXC1-211ENST00000589548 CNFNQ9BYD5 112 aa10.87□□□□□ -0.67
CXXC1-211ENST00000589548 TRBV20OR9-2A0A075B6H5 130 aa10.86□□□□□ -0.67
CXXC1-211ENST00000589548 XKRY2A2RUG3 117 aa10.86□□□□□ -0.67
CXXC1-211ENST00000589548 H2AFB1P0C5Y9 115 aa10.86□□□□□ -0.67
CXXC1-211ENST00000589548 TWIST1Q15672 202 aa10.86□□□□□ -0.67
CXXC1-211ENST00000589548 C9orf116Q5BN46 136 aaPredicted RBP10.86□□□□□ -0.67
CXXC1-211ENST00000589548 PHF5AQ7RTV0 110 aaKnown RBP10.86□□□□□ -0.67
CXXC1-211ENST00000589548 IGLV4-69A0A075B6H9 119 aa10.85□□□□□ -0.67
CXXC1-211ENST00000589548 SDHAF1A6NFY7 115 aa10.85□□□□□ -0.67
CXXC1-211ENST00000589548 SMLR1H3BR10 107 aa10.84□□□□□ -0.67
CXXC1-211ENST00000589548 GNG4P50150 75 aa10.84□□□□□ -0.67
CXXC1-211ENST00000589548 FOXA3P55318 350 aaPredicted RBP10.84□□□□□ -0.67
CXXC1-211ENST00000589548 CD164L2Q6UWJ8 174 aa10.84□□□□□ -0.67
CXXC1-211ENST00000589548 NUP35Q8NFH5 326 aa10.84□□□□□ -0.67
CXXC1-211ENST00000589548 SMIM12Q96EX1 92 aa10.84□□□□□ -0.67
CXXC1-211ENST00000589548 GNG13Q9P2W3 67 aa10.84□□□□□ -0.67
CXXC1-211ENST00000589548 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.83□□□□□ -0.68
CXXC1-211ENST00000589548 ESDP10768 282 aa10.83□□□□□ -0.68
CXXC1-211ENST00000589548 MEF2BQ02080 365 aaPredicted RBP10.83□□□□□ -0.68
CXXC1-211ENST00000589548 BTF3L4Q96K17 158 aa10.83□□□□□ -0.68
CXXC1-211ENST00000589548 MANBALQ9NQG1 85 aa10.83□□□□□ -0.68
CXXC1-211ENST00000589548 IGLV7-43P04211 117 aa10.82□□□□□ -0.68
CXXC1-211ENST00000589548 SS18Q15532 418 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms