RNA–Protein interactions for RNA: ENST00000589447.1

LINC01539-203, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-203ENST00000589447 IGHV1-69P01742 117 aa2.53□□□□□ -2
LINC01539-203ENST00000589447 IGHV3-23P01764 117 aa2.53□□□□□ -2
LINC01539-203ENST00000589447 PRB4P10163 310 aaPredicted RBP2.53□□□□□ -2
LINC01539-203ENST00000589447 PRTN3P24158 256 aa2.53□□□□□ -2
LINC01539-203ENST00000589447 HOXD3P31249 432 aaPredicted RBP2.53□□□□□ -2
LINC01539-203ENST00000589447 KLK9Q2XQG4 91 aa2.53□□□□□ -2
LINC01539-203ENST00000589447 TMEM170BQ5T4T1 132 aa2.53□□□□□ -2
LINC01539-203ENST00000589447 MINOS1Q5TGZ0 78 aa2.53□□□□□ -2
LINC01539-203ENST00000589447 IGFL4Q6B9Z1 124 aa2.53□□□□□ -2
LINC01539-203ENST00000589447 SFTA2Q6UW10 78 aa2.53□□□□□ -2
LINC01539-203ENST00000589447 ZFP2Q6ZN57 461 aa2.53□□□□□ -2
LINC01539-203ENST00000589447 RNF182Q8N6D2 247 aa2.53□□□□□ -2
LINC01539-203ENST00000589447 Q8N6K4 173 aa2.53□□□□□ -2
LINC01539-203ENST00000589447 POM121L12Q8N7R1 296 aa2.53□□□□□ -2
LINC01539-203ENST00000589447 LY6G5BQ8NDX9 201 aa2.53□□□□□ -2
LINC01539-203ENST00000589447 PTH2Q96A98 100 aa2.53□□□□□ -2
LINC01539-203ENST00000589447 LINC00477Q96M19 166 aa2.53□□□□□ -2
LINC01539-203ENST00000589447 TMEM126AQ9H061 195 aa2.53□□□□□ -2
LINC01539-203ENST00000589447 SPANXCQ9NY87 97 aa2.53□□□□□ -2
LINC01539-203ENST00000589447 KLK9Q9UKQ9 250 aa2.53□□□□□ -2
LINC01539-203ENST00000589447 TP53TG1Q9Y2A0 90 aa2.53□□□□□ -2
LINC01539-203ENST00000589447 MINOS1-NBL1R4GNA1 71 aa2.53□□□□□ -2
LINC01539-203ENST00000589447 VPS13CQ709C8 3753 aa2.53□□□□□ -2.01
LINC01539-203ENST00000589447 DNHD1Q96M86 4753 aa2.53□□□□□ -2.01
LINC01539-203ENST00000589447 IGLV4-69A0A075B6H9 119 aa2.52□□□□□ -2.01
LINC01539-203ENST00000589447 IGHV7-81A0A0B4J1V7 117 aa2.52□□□□□ -2.01
LINC01539-203ENST00000589447 TRAV2A0A0B4J234 112 aa2.52□□□□□ -2.01
LINC01539-203ENST00000589447 TRBV30A0A0K0K1B3 111 aa2.52□□□□□ -2.01
LINC01539-203ENST00000589447 E7EQL1 145 aa2.52□□□□□ -2.01
LINC01539-203ENST00000589447 LGALS9O00182 355 aa2.52□□□□□ -2.01
LINC01539-203ENST00000589447 DUSP14O95147 198 aaKnown RBP2.52□□□□□ -2.01
LINC01539-203ENST00000589447 NXPH4O95158 308 aa2.52□□□□□ -2.01
LINC01539-203ENST00000589447 IGHV3-33P01772 117 aa2.52□□□□□ -2.01
LINC01539-203ENST00000589447 ACYP1P07311 99 aa2.52□□□□□ -2.01
LINC01539-203ENST00000589447 NDPQ00604 133 aa2.52□□□□□ -2.01
LINC01539-203ENST00000589447 EBI3Q14213 229 aa2.52□□□□□ -2.01
LINC01539-203ENST00000589447 RHOHQ15669 191 aa2.52□□□□□ -2.01
LINC01539-203ENST00000589447 ECSCRQ19T08 205 aa2.52□□□□□ -2.01
LINC01539-203ENST00000589447 C15orf32Q32M92 178 aa2.52□□□□□ -2.01
LINC01539-203ENST00000589447 NSUN5P1Q3KNT7 163 aa2.52□□□□□ -2.01
LINC01539-203ENST00000589447 ZNF876PQ49A33 203 aa2.52□□□□□ -2.01
LINC01539-203ENST00000589447 C2orf82Q6UX34 121 aa2.52□□□□□ -2.01
LINC01539-203ENST00000589447 ZNF575Q86XF7 245 aa2.52□□□□□ -2.01
LINC01539-203ENST00000589447 C14orf178Q8N769 122 aaPredicted RBP2.52□□□□□ -2.01
LINC01539-203ENST00000589447 C15orf53Q8NAA6 179 aa2.52□□□□□ -2.01
LINC01539-203ENST00000589447 NTN5Q8WTR8 489 aaPredicted RBP2.52□□□□□ -2.01
LINC01539-203ENST00000589447 TMEM263Q8WUH6 116 aaKnown RBP2.52□□□□□ -2.01
LINC01539-203ENST00000589447 RPL39LQ96EH5 51 aaKnown RBP2.52□□□□□ -2.01
LINC01539-203ENST00000589447 TMEM101Q96IK0 257 aa2.52□□□□□ -2.01
LINC01539-203ENST00000589447 MDFICQ9P1T7 246 aa2.52□□□□□ -2.01
LINC01539-203ENST00000589447 C11orf21Q9P2W6 132 aa2.52□□□□□ -2.01
LINC01539-203ENST00000589447 ARHGAP32A7KAX9 2087 aa2.52□□□□□ -2.01
LINC01539-203ENST00000589447 FN1P02751 2386 aaKnown RBP2.52□□□□□ -2.01
LINC01539-203ENST00000589447 IGHV4OR15-8A0A075B7B6 117 aa2.51□□□□□ -2.01
LINC01539-203ENST00000589447 A0A087WW49 117 aa2.51□□□□□ -2.01
LINC01539-203ENST00000589447 TRAV4A0A0B4J268 109 aa2.51□□□□□ -2.01
LINC01539-203ENST00000589447 TRBV6-5A0A0K0K1A5 114 aa2.51□□□□□ -2.01
LINC01539-203ENST00000589447 TMEM223A0PJW6 202 aa2.51□□□□□ -2.01
LINC01539-203ENST00000589447 KRTAP23-1A1A580 65 aa2.51□□□□□ -2.01
LINC01539-203ENST00000589447 IGIPA6NJ69 53 aa2.51□□□□□ -2.01
LINC01539-203ENST00000589447 FAM223BA6NKX1 122 aa2.51□□□□□ -2.01
LINC01539-203ENST00000589447 CCDC179H3BU77 68 aa2.51□□□□□ -2.01
LINC01539-203ENST00000589447 H7C2G1 150 aa2.51□□□□□ -2.01
LINC01539-203ENST00000589447 IGHV4-39P01824 125 aa2.51□□□□□ -2.01
LINC01539-203ENST00000589447 ATP5G1P05496 136 aa2.51□□□□□ -2.01
LINC01539-203ENST00000589447 NHLRC4P0CG21 123 aaPredicted RBP2.51□□□□□ -2.01
LINC01539-203ENST00000589447 PIK3CD-AS1Q5SR53 167 aa2.51□□□□□ -2.01
LINC01539-203ENST00000589447 SUMO4Q6EEV6 95 aa2.51□□□□□ -2.01
LINC01539-203ENST00000589447 CLEC19AQ6UXS0 136 aa2.51□□□□□ -2.01
LINC01539-203ENST00000589447 VMO1Q7Z5L0 202 aa2.51□□□□□ -2.01
LINC01539-203ENST00000589447 TRPT1Q86TN4 253 aaKnown RBP2.51□□□□□ -2.01
LINC01539-203ENST00000589447 FAM223AQ8IWN6 122 aa2.51□□□□□ -2.01
LINC01539-203ENST00000589447 SMIM20Q8N5G0 67 aa2.51□□□□□ -2.01
LINC01539-203ENST00000589447 Q8N9W7 124 aa2.51□□□□□ -2.01
LINC01539-203ENST00000589447 KLHL30-AS1Q8NEE0 82 aa2.51□□□□□ -2.01
LINC01539-203ENST00000589447 ITLN2Q8WWU7 325 aaPredicted RBP2.51□□□□□ -2.01
LINC01539-203ENST00000589447 COPS9Q8WXC6 57 aa2.51□□□□□ -2.01
LINC01539-203ENST00000589447 IMUPQ9GZP8 106 aa2.51□□□□□ -2.01
LINC01539-203ENST00000589447 ZNF256Q9Y2P7 627 aaPredicted RBP2.51□□□□□ -2.01
LINC01539-203ENST00000589447 ICOSQ9Y6W8 199 aa2.51□□□□□ -2.01
LINC01539-203ENST00000589447 CADP27708 2225 aa2.51□□□□□ -2.01
LINC01539-203ENST00000589447 PLCE1Q9P212 2302 aa2.51□□□□□ -2.01
LINC01539-203ENST00000589447 MXRA5Q9NR99 2828 aa2.5□□□□□ -2.01
LINC01539-203ENST00000589447 IGHV3OR16-8A0A075B7F1 116 aa2.5□□□□□ -2.01
LINC01539-203ENST00000589447 IGHV3-35A0A0C4DH35 117 aa2.5□□□□□ -2.01
LINC01539-203ENST00000589447 IGHV3-66A0A0C4DH42 116 aa2.5□□□□□ -2.01
LINC01539-203ENST00000589447 TRBV27A0A0K0K1C4 114 aa2.5□□□□□ -2.01
LINC01539-203ENST00000589447 TRBV7-7A0A0K0K1E9 115 aa2.5□□□□□ -2.01
LINC01539-203ENST00000589447 CLPSL1A2RUU4 121 aa2.5□□□□□ -2.01
LINC01539-203ENST00000589447 NDUFA4O00483 81 aa2.5□□□□□ -2.01
LINC01539-203ENST00000589447 ATP6V0E1O15342 81 aa2.5□□□□□ -2.01
LINC01539-203ENST00000589447 TSHBP01222 138 aa2.5□□□□□ -2.01
LINC01539-203ENST00000589447 CRYGDP07320 174 aa2.5□□□□□ -2.01
LINC01539-203ENST00000589447 IGHV4-31P0DP07 118 aa2.5□□□□□ -2.01
LINC01539-203ENST00000589447 ZNF22P17026 224 aaPredicted RBP2.5□□□□□ -2.01
LINC01539-203ENST00000589447 RNASE4P34096 147 aaKnown RBP2.5□□□□□ -2.01
LINC01539-203ENST00000589447 POLR2KP53803 58 aaKnown RBP2.5□□□□□ -2.01
LINC01539-203ENST00000589447 EMP1P54849 157 aa2.5□□□□□ -2.01
LINC01539-203ENST00000589447 TSPEAR-AS2P59090 65 aa2.5□□□□□ -2.01
LINC01539-203ENST00000589447 PRB3Q04118 309 aaPredicted RBP2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms