RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 Q8N8P6 123 aa14.74□□□□□ -0.05
R3HDM4-204ENST00000589428 NXT2Q9NPJ8 142 aaKnown RBP14.74□□□□□ -0.05
R3HDM4-204ENST00000589428 SERF1AO75920 110 aa14.73□□□□□ -0.05
R3HDM4-204ENST00000589428 NIT1Q86X76 327 aa14.73□□□□□ -0.05
R3HDM4-204ENST00000589428 VPS13DQ5THJ4 4388 aa14.73□□□□□ -0.05
R3HDM4-204ENST00000589428 RNASEKQ6P5S7 137 aaKnown RBP14.72□□□□□ -0.05
R3HDM4-204ENST00000589428 DEFB104AQ8WTQ1 72 aa14.72□□□□□ -0.05
R3HDM4-204ENST00000589428 A0A096LPF7 62 aa14.72□□□□□ -0.05
R3HDM4-204ENST00000589428 VCYO14598 125 aa14.72□□□□□ -0.05
R3HDM4-204ENST00000589428 CCL18P55774 89 aa14.72□□□□□ -0.05
R3HDM4-204ENST00000589428 MRPL23Q16540 153 aaKnown RBP14.72□□□□□ -0.05
R3HDM4-204ENST00000589428 IGHV3-38A0A0C4DH36 116 aa14.71□□□□□ -0.05
R3HDM4-204ENST00000589428 NUPR1O60356 82 aa14.71□□□□□ -0.05
R3HDM4-204ENST00000589428 FA2HQ7L5A8 372 aa14.71□□□□□ -0.05
R3HDM4-204ENST00000589428 I3L3M4 83 aa14.7□□□□□ -0.06
R3HDM4-204ENST00000589428 TCAPO15273 167 aa14.7□□□□□ -0.06
R3HDM4-204ENST00000589428 S100A6P06703 90 aa14.7□□□□□ -0.06
R3HDM4-204ENST00000589428 LINC00614P0C842 121 aa14.7□□□□□ -0.06
R3HDM4-204ENST00000589428 LINC01546A6NGU7 62 aa14.69□□□□□ -0.06
R3HDM4-204ENST00000589428 AP5S1Q9NUS5 200 aa14.69□□□□□ -0.06
R3HDM4-204ENST00000589428 TSHBP01222 138 aa14.69□□□□□ -0.06
R3HDM4-204ENST00000589428 DAZ4Q86SG3 579 aaKnown RBP14.69□□□□□ -0.06
R3HDM4-204ENST00000589428 CHCHD1Q96BP2 118 aaKnown RBP14.69□□□□□ -0.06
R3HDM4-204ENST00000589428 DAZ3Q9NR90 486 aaKnown RBP14.69□□□□□ -0.06
R3HDM4-204ENST00000589428 KIR2DL4Q99706 377 aa14.68□□□□□ -0.06
R3HDM4-204ENST00000589428 RYR2Q92736 4967 aa14.67□□□□□ -0.06
R3HDM4-204ENST00000589428 ESDP10768 282 aa14.66□□□□□ -0.06
R3HDM4-204ENST00000589428 SNRPEP62304 92 aaKnown RBP14.66□□□□□ -0.06
R3HDM4-204ENST00000589428 ATP6V0E2Q8NHE4 81 aa14.66□□□□□ -0.06
R3HDM4-204ENST00000589428 LINC00588Q9Y4M8 146 aa14.66□□□□□ -0.06
R3HDM4-204ENST00000589428 FCER1GP30273 86 aa14.65□□□□□ -0.06
R3HDM4-204ENST00000589428 LAGE3Q14657 143 aa14.65□□□□□ -0.06
R3HDM4-204ENST00000589428 PMCHL1Q16048 86 aa14.65□□□□□ -0.06
R3HDM4-204ENST00000589428 SH2D6Q7Z4S9 175 aa14.65□□□□□ -0.06
R3HDM4-204ENST00000589428 RYR3Q15413 4870 aa14.65□□□□□ -0.06
R3HDM4-204ENST00000589428 C5orf52A6NGY3 159 aa14.64□□□□□ -0.07
R3HDM4-204ENST00000589428 K7EMI3 77 aa14.64□□□□□ -0.07
R3HDM4-204ENST00000589428 HSBP1O75506 76 aa14.64□□□□□ -0.07
R3HDM4-204ENST00000589428 COTL1Q14019 142 aa14.64□□□□□ -0.07
R3HDM4-204ENST00000589428 ESRGQ1W209 222 aa14.64□□□□□ -0.07
R3HDM4-204ENST00000589428 PDZD11Q5EBL8 140 aa14.63□□□□□ -0.07
R3HDM4-204ENST00000589428 NTM-AS1Q6ZSK4 140 aa14.63□□□□□ -0.07
R3HDM4-204ENST00000589428 A0A096LNJ9 63 aa14.63□□□□□ -0.07
R3HDM4-204ENST00000589428 IGHV1-24A0A0C4DH33 117 aa14.63□□□□□ -0.07
R3HDM4-204ENST00000589428 ORMDL2Q53FV1 153 aa14.63□□□□□ -0.07
R3HDM4-204ENST00000589428 FAM19A2Q8N3H0 131 aa14.63□□□□□ -0.07
R3HDM4-204ENST00000589428 MRPS16Q9Y3D3 137 aaKnown RBP14.62□□□□□ -0.07
R3HDM4-204ENST00000589428 HYDINQ4G0P3 5121 aa14.62□□□□□ -0.07
R3HDM4-204ENST00000589428 KMT2AQ03164 3969 aa14.61□□□□□ -0.07
R3HDM4-204ENST00000589428 HIST3H2BBQ8N257 126 aa14.61□□□□□ -0.07
R3HDM4-204ENST00000589428 GTSF1LQ9H1H1 148 aa14.61□□□□□ -0.07
R3HDM4-204ENST00000589428 DNAH6Q9C0G6 4158 aa14.6□□□□□ -0.07
R3HDM4-204ENST00000589428 LYPD5Q6UWN5 251 aa14.6□□□□□ -0.07
R3HDM4-204ENST00000589428 UPK3BQ9BT76 320 aa14.6□□□□□ -0.07
R3HDM4-204ENST00000589428 CHCHD7Q9BUK0 85 aa14.6□□□□□ -0.07
R3HDM4-204ENST00000589428 AMTP48728 403 aa14.59□□□□□ -0.07
R3HDM4-204ENST00000589428 TRBV6-8A0A0A6YYG3 113 aa14.58□□□□□ -0.07
R3HDM4-204ENST00000589428 BTF3P20290 206 aaKnown RBP14.58□□□□□ -0.07
R3HDM4-204ENST00000589428 IFITM10A6NMD0 228 aa14.58□□□□□ -0.08
R3HDM4-204ENST00000589428 HBDP02042 147 aa14.58□□□□□ -0.08
R3HDM4-204ENST00000589428 TMEM97Q5BJF2 176 aa14.57□□□□□ -0.08
R3HDM4-204ENST00000589428 C20orf203Q8NBC4 194 aa14.57□□□□□ -0.08
R3HDM4-204ENST00000589428 RPL39P62891 51 aaKnown RBP14.56□□□□□ -0.08
R3HDM4-204ENST00000589428 C2orf66Q6UXQ4 117 aa14.56□□□□□ -0.08
R3HDM4-204ENST00000589428 TRBV25-1A0A075B6N4 114 aa14.55□□□□□ -0.08
R3HDM4-204ENST00000589428 TIRAPP58753 221 aa14.55□□□□□ -0.08
R3HDM4-204ENST00000589428 Q9H8V8 135 aa14.55□□□□□ -0.08
R3HDM4-204ENST00000589428 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.55□□□□□ -0.08
R3HDM4-204ENST00000589428 IGKV2-29A2NJV5 120 aaPredicted RBP14.55□□□□□ -0.08
R3HDM4-204ENST00000589428 TOMM6Q96B49 74 aa14.55□□□□□ -0.08
R3HDM4-204ENST00000589428 HIST1H2BLQ99880 126 aa14.55□□□□□ -0.08
R3HDM4-204ENST00000589428 TMEM243Q9BU79 118 aa14.55□□□□□ -0.08
R3HDM4-204ENST00000589428 CYSLTR1Q9Y271 337 aa14.55□□□□□ -0.08
R3HDM4-204ENST00000589428 S100A2P29034 98 aa14.54□□□□□ -0.08
R3HDM4-204ENST00000589428 M0R2N4 97 aa14.53□□□□□ -0.08
R3HDM4-204ENST00000589428 SIVA1O15304 175 aa14.52□□□□□ -0.08
R3HDM4-204ENST00000589428 TMEM18Q96B42 140 aa14.52□□□□□ -0.08
R3HDM4-204ENST00000589428 FABP4P15090 132 aa14.52□□□□□ -0.09
R3HDM4-204ENST00000589428 G0S2P27469 103 aa14.52□□□□□ -0.09
R3HDM4-204ENST00000589428 LELP1Q5T871 98 aa14.52□□□□□ -0.09
R3HDM4-204ENST00000589428 LINC00173Q6ZV60 143 aa14.52□□□□□ -0.09
R3HDM4-204ENST00000589428 PACRGQ96M98 296 aaPredicted RBP14.52□□□□□ -0.09
R3HDM4-204ENST00000589428 CHCHD5Q9BSY4 110 aa14.51□□□□□ -0.09
R3HDM4-204ENST00000589428 NBDYA0A0U1RRE5 68 aa14.5□□□□□ -0.09
R3HDM4-204ENST00000589428 LEPROTL1O95214 131 aa14.5□□□□□ -0.09
R3HDM4-204ENST00000589428 TTC32Q5I0X7 151 aa14.5□□□□□ -0.09
R3HDM4-204ENST00000589428 TRAV8-6A0A0B4J262 113 aa14.49□□□□□ -0.09
R3HDM4-204ENST00000589428 WFDC10BQ8IUB3 73 aa14.49□□□□□ -0.09
R3HDM4-204ENST00000589428 UBE2D4Q9Y2X8 147 aa14.49□□□□□ -0.09
R3HDM4-204ENST00000589428 IGIPA6NJ69 53 aa14.48□□□□□ -0.09
R3HDM4-204ENST00000589428 UBE2L6O14933 153 aa14.48□□□□□ -0.09
R3HDM4-204ENST00000589428 GAGE6Q13070 117 aa14.48□□□□□ -0.09
R3HDM4-204ENST00000589428 Q6ZR54 194 aa14.48□□□□□ -0.09
R3HDM4-204ENST00000589428 SCGB3A1Q96QR1 104 aa14.48□□□□□ -0.09
R3HDM4-204ENST00000589428 LINC01549A6NIU2 74 aa14.47□□□□□ -0.09
R3HDM4-204ENST00000589428 H7C423 109 aa14.47□□□□□ -0.09
R3HDM4-204ENST00000589428 FGF6P10767 208 aa14.47□□□□□ -0.09
R3HDM4-204ENST00000589428 ERASQ7Z444 233 aa14.47□□□□□ -0.09
R3HDM4-204ENST00000589428 MRPL52Q86TS9 123 aaKnown RBP14.46□□□□□ -0.09
R3HDM4-204ENST00000589428 HSPB8Q9UJY1 196 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms