RNA–Protein interactions for RNA: ENST00000589286.1

HMGN1P30-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 30, humanhuman

BASIC

Gene HMGN1P30, Length 268 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P30-201ENST00000589286 UQCRHP07919 91 aa0.35□□□□□ -2.35
HMGN1P30-201ENST00000589286 SERPINB1P30740 379 aa0.35□□□□□ -2.35
HMGN1P30-201ENST00000589286 EIF3IQ13347 325 aaKnown RBP0.35□□□□□ -2.35
HMGN1P30-201ENST00000589286 LELP1Q5T871 98 aa0.35□□□□□ -2.35
HMGN1P30-201ENST00000589286 C3orf33Q6P1S2 294 aa0.35□□□□□ -2.35
HMGN1P30-201ENST00000589286 GLIPR1L1Q6UWM5 242 aa0.35□□□□□ -2.35
HMGN1P30-201ENST00000589286 PRR15Q8IV56 129 aa0.35□□□□□ -2.35
HMGN1P30-201ENST00000589286 IFT20Q8IY31 132 aa0.35□□□□□ -2.35
HMGN1P30-201ENST00000589286 LRRC18Q8N456 261 aa0.35□□□□□ -2.35
HMGN1P30-201ENST00000589286 STX19Q8N4C7 294 aa0.35□□□□□ -2.35
HMGN1P30-201ENST00000589286 FAM216BQ8N7L0 139 aa0.35□□□□□ -2.35
HMGN1P30-201ENST00000589286 NEK7Q8TDX7 302 aa0.35□□□□□ -2.35
HMGN1P30-201ENST00000589286 CCL19Q99731 98 aa0.35□□□□□ -2.35
HMGN1P30-201ENST00000589286 OR2H1Q9GZK4 316 aa0.35□□□□□ -2.35
HMGN1P30-201ENST00000589286 MAP1LC3BQ9GZQ8 125 aa0.35□□□□□ -2.35
HMGN1P30-201ENST00000589286 TMEM138Q9NPI0 162 aa0.35□□□□□ -2.35
HMGN1P30-201ENST00000589286 LAMTOR3Q9UHA4 124 aa0.35□□□□□ -2.35
HMGN1P30-201ENST00000589286 NUBP2Q9Y5Y2 271 aa0.35□□□□□ -2.35
HMGN1P30-201ENST00000589286 U3KQA8 63 aa0.35□□□□□ -2.35
HMGN1P30-201ENST00000589286 ABCA4P78363 2273 aa0.35□□□□□ -2.35
HMGN1P30-201ENST00000589286 ANK1P16157 1881 aa0.35□□□□□ -2.35
HMGN1P30-201ENST00000589286 CCDC171Q6TFL3 1326 aa0.35□□□□□ -2.35
HMGN1P30-201ENST00000589286 MYH8P13535 1937 aa0.34□□□□□ -2.35
HMGN1P30-201ENST00000589286 ZGRF1Q86YA3 2104 aa0.34□□□□□ -2.35
HMGN1P30-201ENST00000589286 C9orf170A2RU37 121 aa0.34□□□□□ -2.36
HMGN1P30-201ENST00000589286 ARL5CA6NH57 179 aa0.34□□□□□ -2.36
HMGN1P30-201ENST00000589286 PHGR1C9JFL3 82 aa0.34□□□□□ -2.36
HMGN1P30-201ENST00000589286 JMJD7-PLA2G4BH0Y9G9 81 aa0.34□□□□□ -2.36
HMGN1P30-201ENST00000589286 H3BQV1 296 aa0.34□□□□□ -2.36
HMGN1P30-201ENST00000589286 LYRM1O43325 122 aa0.34□□□□□ -2.36
HMGN1P30-201ENST00000589286 IGHV3-33P01772 117 aa0.34□□□□□ -2.36
HMGN1P30-201ENST00000589286 G0S2P27469 103 aa0.34□□□□□ -2.36
HMGN1P30-201ENST00000589286 RPL35P42766 123 aaKnown RBP0.34□□□□□ -2.36
HMGN1P30-201ENST00000589286 VBP1P61758 197 aa0.34□□□□□ -2.36
HMGN1P30-201ENST00000589286 MIR22HGQ0VDD5 57 aa0.34□□□□□ -2.36
HMGN1P30-201ENST00000589286 C6orf52Q5T4I8 152 aa0.34□□□□□ -2.36
HMGN1P30-201ENST00000589286 TMEM78Q5T7P6 136 aa0.34□□□□□ -2.36
HMGN1P30-201ENST00000589286 LINC00575Q6W349 94 aa0.34□□□□□ -2.36
HMGN1P30-201ENST00000589286 FOXI2Q6ZQN5 318 aa0.34□□□□□ -2.36
HMGN1P30-201ENST00000589286 LINC00269Q8N2A0 174 aa0.34□□□□□ -2.36
HMGN1P30-201ENST00000589286 CCL4L1Q8NHW4 92 aa0.34□□□□□ -2.36
HMGN1P30-201ENST00000589286 DIRC1Q969H9 104 aa0.34□□□□□ -2.36
HMGN1P30-201ENST00000589286 TAF9BQ9HBM6 251 aa0.34□□□□□ -2.36
HMGN1P30-201ENST00000589286 HSPB8Q9UJY1 196 aa0.34□□□□□ -2.36
HMGN1P30-201ENST00000589286 Q9Y3F1 56 aa0.34□□□□□ -2.36
HMGN1P30-201ENST00000589286 FLGP20930 4061 aaPredicted RBP0.34□□□□□ -2.36
HMGN1P30-201ENST00000589286 MYO7BQ6PIF6 2116 aa0.34□□□□□ -2.36
HMGN1P30-201ENST00000589286 KNL1Q8NG31 2342 aa0.33□□□□□ -2.36
HMGN1P30-201ENST00000589286 F5P12259 2224 aa0.33□□□□□ -2.36
HMGN1P30-201ENST00000589286 USF3Q68DE3 2245 aa0.33□□□□□ -2.36
HMGN1P30-201ENST00000589286 MYH4Q9Y623 1939 aa0.33□□□□□ -2.36
HMGN1P30-201ENST00000589286 H7BYZ3 331 aa0.33□□□□□ -2.36
HMGN1P30-201ENST00000589286 PPYP01298 95 aa0.33□□□□□ -2.36
HMGN1P30-201ENST00000589286 IGLV3-1P01715 115 aa0.33□□□□□ -2.36
HMGN1P30-201ENST00000589286 S100A5P33763 92 aa0.33□□□□□ -2.36
HMGN1P30-201ENST00000589286 TFF3Q07654 80 aa0.33□□□□□ -2.36
HMGN1P30-201ENST00000589286 SPATA45Q537H7 98 aa0.33□□□□□ -2.36
HMGN1P30-201ENST00000589286 TRIQKQ629K1 86 aa0.33□□□□□ -2.36
HMGN1P30-201ENST00000589286 DCUN1D2Q6PH85 259 aa0.33□□□□□ -2.36
HMGN1P30-201ENST00000589286 FAM24BQ8N5W8 94 aa0.33□□□□□ -2.36
HMGN1P30-201ENST00000589286 OR10AC1Q8NH08 325 aa0.33□□□□□ -2.36
HMGN1P30-201ENST00000589286 BORCS8Q96FH0 119 aa0.33□□□□□ -2.36
HMGN1P30-201ENST00000589286 MCEEQ96PE7 176 aa0.33□□□□□ -2.36
HMGN1P30-201ENST00000589286 WFDC10AQ9H1F0 79 aa0.33□□□□□ -2.36
HMGN1P30-201ENST00000589286 NAT8BQ9UHF3 227 aa0.33□□□□□ -2.36
HMGN1P30-201ENST00000589286 SMPXQ9UHP9 88 aa0.33□□□□□ -2.36
HMGN1P30-201ENST00000589286 MUC5ACP98088 5654 aa0.33□□□□□ -2.36
HMGN1P30-201ENST00000589286 ABCA1O95477 2261 aa0.33□□□□□ -2.36
HMGN1P30-201ENST00000589286 PLIN4Q96Q06 1357 aa0.32□□□□□ -2.36
HMGN1P30-201ENST00000589286 MUC4Q99102 2169 aa0.32□□□□□ -2.36
HMGN1P30-201ENST00000589286 KNTC1P50748 2209 aa0.32□□□□□ -2.36
HMGN1P30-201ENST00000589286 A0A0J9YY99 117 aa0.32□□□□□ -2.36
HMGN1P30-201ENST00000589286 TRDV1A0A1B0GX56 115 aa0.32□□□□□ -2.36
HMGN1P30-201ENST00000589286 A0A1W2PRE2 83 aa0.32□□□□□ -2.36
HMGN1P30-201ENST00000589286 MAP1LC3B2A6NCE7 125 aa0.32□□□□□ -2.36
HMGN1P30-201ENST00000589286 LYNX1G3V0Z9 82 aa0.32□□□□□ -2.36
HMGN1P30-201ENST00000589286 KPNA4O00629 521 aaPredicted RBP0.32□□□□□ -2.36
HMGN1P30-201ENST00000589286 UBA52P62987 128 aaKnown RBP0.32□□□□□ -2.36
HMGN1P30-201ENST00000589286 MRPS36P82909 103 aaKnown RBP0.32□□□□□ -2.36
HMGN1P30-201ENST00000589286 CIRBPQ14011 172 aaKnown RBP0.32□□□□□ -2.36
HMGN1P30-201ENST00000589286 Q5VSD8 79 aa0.32□□□□□ -2.36
HMGN1P30-201ENST00000589286 ISOC1Q96CN7 298 aa0.32□□□□□ -2.36
HMGN1P30-201ENST00000589286 PCBD2Q9H0N5 130 aa0.32□□□□□ -2.36
HMGN1P30-201ENST00000589286 CST11Q9H112 138 aa0.32□□□□□ -2.36
HMGN1P30-201ENST00000589286 MED11Q9P086 117 aa0.32□□□□□ -2.36
HMGN1P30-201ENST00000589286 WNK2Q9Y3S1 2297 aa0.32□□□□□ -2.36
HMGN1P30-201ENST00000589286 PLCE1Q9P212 2302 aa0.32□□□□□ -2.36
HMGN1P30-201ENST00000589286 CACNA1CQ13936 2221 aa0.32□□□□□ -2.36
HMGN1P30-201ENST00000589286 HEATR1Q9H583 2144 aaKnown RBP0.31□□□□□ -2.36
HMGN1P30-201ENST00000589286 A0A0G2JMM0 328 aa0.31□□□□□ -2.36
HMGN1P30-201ENST00000589286 A0A1W2PPB8 328 aa0.31□□□□□ -2.36
HMGN1P30-201ENST00000589286 A0A1W2PRS3 328 aa0.31□□□□□ -2.36
HMGN1P30-201ENST00000589286 A6NN06 94 aa0.31□□□□□ -2.36
HMGN1P30-201ENST00000589286 KIR3DP1A8MWS1 328 aa0.31□□□□□ -2.36
HMGN1P30-201ENST00000589286 CD14P08571 375 aa0.31□□□□□ -2.36
HMGN1P30-201ENST00000589286 BCL2P10415 239 aa0.31□□□□□ -2.36
HMGN1P30-201ENST00000589286 FABP4P15090 132 aa0.31□□□□□ -2.36
HMGN1P30-201ENST00000589286 HMGA1P17096 107 aaKnown RBP0.31□□□□□ -2.36
HMGN1P30-201ENST00000589286 FOXA3P55318 350 aaPredicted RBP0.31□□□□□ -2.36
HMGN1P30-201ENST00000589286 DEFB110Q30KQ9 67 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms