RNA–Protein interactions for RNA: ENST00000589162.1

CAPNS1-208, Transcript of calpain small subunit 1, humanhuman

TSL 3

Gene CAPNS1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-208ENST00000589162 HIST1H2BOP23527 126 aa4.16□□□□□ -1.74
CAPNS1-208ENST00000589162 HIST1H2BBP33778 126 aa4.16□□□□□ -1.74
CAPNS1-208ENST00000589162 NDUFA6P56556 154 aa4.16□□□□□ -1.74
CAPNS1-208ENST00000589162 HIST1H2BDP58876 126 aa4.16□□□□□ -1.74
CAPNS1-208ENST00000589162 SUMO2P61956 95 aaKnown RBP4.16□□□□□ -1.74
CAPNS1-208ENST00000589162 HIST1H2BCP62807 126 aa4.16□□□□□ -1.74
CAPNS1-208ENST00000589162 RPL36AP83881 106 aaKnown RBP4.16□□□□□ -1.74
CAPNS1-208ENST00000589162 HIST2H2BEQ16778 126 aa4.16□□□□□ -1.74
CAPNS1-208ENST00000589162 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.16□□□□□ -1.74
CAPNS1-208ENST00000589162 RNASEKQ6P5S7 137 aaKnown RBP4.16□□□□□ -1.74
CAPNS1-208ENST00000589162 ATP6V0E2Q8NHE4 81 aa4.16□□□□□ -1.74
CAPNS1-208ENST00000589162 HIST1H2BHQ93079 126 aa4.16□□□□□ -1.74
CAPNS1-208ENST00000589162 RPL36ALQ969Q0 106 aaKnown RBP4.16□□□□□ -1.74
CAPNS1-208ENST00000589162 HIST1H2BNQ99877 126 aa4.16□□□□□ -1.74
CAPNS1-208ENST00000589162 HIST1H2BMQ99879 126 aa4.16□□□□□ -1.74
CAPNS1-208ENST00000589162 SMIM2Q9BVW6 85 aa4.16□□□□□ -1.74
CAPNS1-208ENST00000589162 MAP1LC3AQ9H492 121 aa4.16□□□□□ -1.74
CAPNS1-208ENST00000589162 APLNQ9ULZ1 77 aa4.16□□□□□ -1.74
CAPNS1-208ENST00000589162 ICOSQ9Y6W8 199 aa4.16□□□□□ -1.74
CAPNS1-208ENST00000589162 PRKDCP78527 4128 aaKnown RBP4.15□□□□□ -1.74
CAPNS1-208ENST00000589162 TRBV7-3A0A075B6L6 115 aa4.15□□□□□ -1.75
CAPNS1-208ENST00000589162 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.15□□□□□ -1.75
CAPNS1-208ENST00000589162 TRBV6-5A0A0K0K1A5 114 aa4.15□□□□□ -1.75
CAPNS1-208ENST00000589162 IGKV2-29A2NJV5 120 aaPredicted RBP4.15□□□□□ -1.75
CAPNS1-208ENST00000589162 H7C1H1 209 aa4.15□□□□□ -1.75
CAPNS1-208ENST00000589162 SERF1AO75920 110 aa4.15□□□□□ -1.75
CAPNS1-208ENST00000589162 PMCHP20382 165 aa4.15□□□□□ -1.75
CAPNS1-208ENST00000589162 POLR2KP53803 58 aaKnown RBP4.15□□□□□ -1.75
CAPNS1-208ENST00000589162 GAGE6Q13070 117 aa4.15□□□□□ -1.75
CAPNS1-208ENST00000589162 ESRGQ1W209 222 aa4.15□□□□□ -1.75
CAPNS1-208ENST00000589162 PDZD11Q5EBL8 140 aa4.15□□□□□ -1.75
CAPNS1-208ENST00000589162 NIT1Q86X76 327 aa4.15□□□□□ -1.75
CAPNS1-208ENST00000589162 FAM19A2Q8N3H0 131 aa4.15□□□□□ -1.75
CAPNS1-208ENST00000589162 PRSS3P2Q8NHM4 247 aa4.15□□□□□ -1.75
CAPNS1-208ENST00000589162 MUC7Q8TAX7 377 aa4.15□□□□□ -1.75
CAPNS1-208ENST00000589162 WWC2-AS2Q96NR7 200 aa4.15□□□□□ -1.75
CAPNS1-208ENST00000589162 TRBV10-1A0A0K0K1A3 114 aa4.14□□□□□ -1.75
CAPNS1-208ENST00000589162 CIDEAO60543 219 aa4.14□□□□□ -1.75
CAPNS1-208ENST00000589162 PPBPP02775 128 aa4.14□□□□□ -1.75
CAPNS1-208ENST00000589162 RPL39P62891 51 aaKnown RBP4.14□□□□□ -1.75
CAPNS1-208ENST00000589162 MRPL23Q16540 153 aaKnown RBP4.14□□□□□ -1.75
CAPNS1-208ENST00000589162 ZC2HC1BQ5TFG8 222 aa4.14□□□□□ -1.75
CAPNS1-208ENST00000589162 LYPD5Q6UWN5 251 aa4.14□□□□□ -1.75
CAPNS1-208ENST00000589162 LINC00173Q6ZV60 143 aa4.14□□□□□ -1.75
CAPNS1-208ENST00000589162 BAGE3Q86Y29 109 aa4.14□□□□□ -1.75
CAPNS1-208ENST00000589162 WFDC10BQ8IUB3 73 aa4.14□□□□□ -1.75
CAPNS1-208ENST00000589162 Q8N8P6 123 aa4.14□□□□□ -1.75
CAPNS1-208ENST00000589162 DNAJC30Q96LL9 226 aa4.14□□□□□ -1.75
CAPNS1-208ENST00000589162 OPRPNQ99935 248 aaPredicted RBP4.14□□□□□ -1.75
CAPNS1-208ENST00000589162 CHCHD7Q9BUK0 85 aa4.14□□□□□ -1.75
CAPNS1-208ENST00000589162 LINC00588Q9Y4M8 146 aa4.14□□□□□ -1.75
CAPNS1-208ENST00000589162 NUPR2A6NF83 97 aa4.13□□□□□ -1.75
CAPNS1-208ENST00000589162 I3L3M4 83 aa4.13□□□□□ -1.75
CAPNS1-208ENST00000589162 VCYO14598 125 aa4.13□□□□□ -1.75
CAPNS1-208ENST00000589162 FCER1GP30273 86 aa4.13□□□□□ -1.75
CAPNS1-208ENST00000589162 AMTP48728 403 aa4.13□□□□□ -1.75
CAPNS1-208ENST00000589162 RAB5BP61020 215 aa4.13□□□□□ -1.75
CAPNS1-208ENST00000589162 COTL1Q14019 142 aa4.13□□□□□ -1.75
CAPNS1-208ENST00000589162 ODF1Q14990 250 aa4.13□□□□□ -1.75
CAPNS1-208ENST00000589162 RNASE13Q5GAN3 156 aaKnown RBP4.13□□□□□ -1.75
CAPNS1-208ENST00000589162 FA2HQ7L5A8 372 aa4.13□□□□□ -1.75
CAPNS1-208ENST00000589162 C20orf78Q9BR46 151 aa4.13□□□□□ -1.75
CAPNS1-208ENST00000589162 GTSF1LQ9H1H1 148 aa4.13□□□□□ -1.75
CAPNS1-208ENST00000589162 A0A096LNJ9 63 aa4.12□□□□□ -1.75
CAPNS1-208ENST00000589162 TRBV27A0A0K0K1C4 114 aa4.12□□□□□ -1.75
CAPNS1-208ENST00000589162 H3BNG1 76 aa4.12□□□□□ -1.75
CAPNS1-208ENST00000589162 IGHV3-30P01768 117 aa4.12□□□□□ -1.75
CAPNS1-208ENST00000589162 IGHV3-33P01772 117 aa4.12□□□□□ -1.75
CAPNS1-208ENST00000589162 LINC00614P0C842 121 aa4.12□□□□□ -1.75
CAPNS1-208ENST00000589162 IGHV3-30-3P0DP02 117 aa4.12□□□□□ -1.75
CAPNS1-208ENST00000589162 IGHV3-30-5P0DP03 117 aa4.12□□□□□ -1.75
CAPNS1-208ENST00000589162 BTF3P20290 206 aaKnown RBP4.12□□□□□ -1.75
CAPNS1-208ENST00000589162 Q0VG73 95 aa4.12□□□□□ -1.75
CAPNS1-208ENST00000589162 ANKRD39Q53RE8 183 aa4.12□□□□□ -1.75
CAPNS1-208ENST00000589162 CASC10Q5T4H9 136 aa4.12□□□□□ -1.75
CAPNS1-208ENST00000589162 CLPSL2Q6UWE3 100 aa4.12□□□□□ -1.75
CAPNS1-208ENST00000589162 CHCHD5Q9BSY4 110 aa4.12□□□□□ -1.75
CAPNS1-208ENST00000589162 LAMTOR2Q9Y2Q5 125 aa4.12□□□□□ -1.75
CAPNS1-208ENST00000589162 COL7A1Q02388 2944 aa4.11□□□□□ -1.75
CAPNS1-208ENST00000589162 IGLV4-60A0A075B6I1 120 aa4.11□□□□□ -1.75
CAPNS1-208ENST00000589162 TRBV6-8A0A0A6YYG3 113 aa4.11□□□□□ -1.75
CAPNS1-208ENST00000589162 IGHV1-24A0A0C4DH33 117 aa4.11□□□□□ -1.75
CAPNS1-208ENST00000589162 HSBP1O75506 76 aa4.11□□□□□ -1.75
CAPNS1-208ENST00000589162 ESDP10768 282 aa4.11□□□□□ -1.75
CAPNS1-208ENST00000589162 FABP4P15090 132 aa4.11□□□□□ -1.75
CAPNS1-208ENST00000589162 SNRPEP62304 92 aaKnown RBP4.11□□□□□ -1.75
CAPNS1-208ENST00000589162 RPL32P62910 135 aaKnown RBP4.11□□□□□ -1.75
CAPNS1-208ENST00000589162 LAGE3Q14657 143 aa4.11□□□□□ -1.75
CAPNS1-208ENST00000589162 MPV17L2Q567V2 206 aa4.11□□□□□ -1.75
CAPNS1-208ENST00000589162 DAZ4Q86SG3 579 aaKnown RBP4.11□□□□□ -1.75
CAPNS1-208ENST00000589162 UBE2DNLQ8IWF7 75 aa4.11□□□□□ -1.75
CAPNS1-208ENST00000589162 Q8N976 141 aa4.11□□□□□ -1.75
CAPNS1-208ENST00000589162 C15orf53Q8NAA6 179 aa4.11□□□□□ -1.75
CAPNS1-208ENST00000589162 KIR2DL4Q99706 377 aa4.11□□□□□ -1.75
CAPNS1-208ENST00000589162 TMEM243Q9BU79 118 aa4.11□□□□□ -1.75
CAPNS1-208ENST00000589162 NXT2Q9NPJ8 142 aaKnown RBP4.11□□□□□ -1.75
CAPNS1-208ENST00000589162 DAZ3Q9NR90 486 aaKnown RBP4.11□□□□□ -1.75
CAPNS1-208ENST00000589162 KLK5Q9Y337 293 aaPredicted RBP4.11□□□□□ -1.75
CAPNS1-208ENST00000589162 IGKV3OR2-268A0A0C4DH90 116 aa4.1□□□□□ -1.75
CAPNS1-208ENST00000589162 C9orf118A6NHY6 69 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms